Basic Information

Insect: Leptidea sinapis
Gene Symbol: ZNF818P
Assembly: GCA_905404315.1
Location: FR990155.1:25702429-25732524[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3.5e-05 0.0047 18.4 1.7 1 23 198 220 198 220 0.99

2 12 0.39 53 5.7 0.1 1 23 227 250 227 250 0.92

3 12 2.9 3.9e+02 2.9 1.6 1 23 254 276 254 276 0.81

4 12 0.011 1.4 10.6 1.8 1 23 281 304 281 304 0.95

5 12 0.086 12 7.7 0.2 2 23 309 331 309 331 0.92

6 12 0.0012 0.16 13.6 0.0 3 20 345 362 343 364 0.93

7 12 0.00092 0.12 14.0 1.9 3 23 377 398 376 398 0.97

8 12 0.00022 0.03 15.9 1.5 2 23 402 424 401 424 0.95

9 12 2.4e-06 0.00033 22.1 0.8 3 23 445 465 443 465 0.97

10 12 0.00022 0.03 15.9 0.3 1 23 471 493 471 493 0.99

11 12 7.7e-07 0.0001 23.6 5.9 1 23 499 521 499 521 0.99

12 12 9.7e-07 0.00013 23.3 0.2 1 23 527 550 527 550 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3.5e-05	0.0047	18.4	1.7	1	23	198	220	198	220	0.99
2	12	0.39	53	5.7	0.1	1	23	227	250	227	250	0.92
3	12	2.9	3.9e+02	2.9	1.6	1	23	254	276	254	276	0.81
4	12	0.011	1.4	10.6	1.8	1	23	281	304	281	304	0.95
5	12	0.086	12	7.7	0.2	2	23	309	331	309	331	0.92
6	12	0.0012	0.16	13.6	0.0	3	20	345	362	343	364	0.93
7	12	0.00092	0.12	14.0	1.9	3	23	377	398	376	398	0.97
8	12	0.00022	0.03	15.9	1.5	2	23	402	424	401	424	0.95
9	12	2.4e-06	0.00033	22.1	0.8	3	23	445	465	443	465	0.97
10	12	0.00022	0.03	15.9	0.3	1	23	471	493	471	493	0.99
11	12	7.7e-07	0.0001	23.6	5.9	1	23	499	521	499	521	0.99
12	12	9.7e-07	0.00013	23.3	0.2	1	23	527	550	527	550	0.98

Sequence Information

Coding Sequence: ATGAATCATTTAAGCGTATGCCGAGTTTGTTTAGCGACAGAAAACGTAAAGTTGTGTAGAATTATTAATTCTAACCTTCTGACTGGCTATGAATTAATTACGGGAACGAAGATCAAACCGTTGGACGGCTTACCACAACACATCTGTAGTTACTGTGCTGCCATGCTAATGAAATACAAGTCGTTTAGAGATAAATGTTGCCACGCTCAGGAGGTGCTTAGATATATGCTGGAGCAAAATATATTGCTAACAATAAAtgatatacaaaatgtaaaacaACATCTCAACCTACACCCCTTGAGTATAATAAAAAACGTGAACATAGACATAACAATCAAAGAAGAAATAGCAGAAGAAAGAGAGGAAGCAGAGATAAAAGAAGAACTGAATAATGTGTTTGATGTAGATGTGAAAGATGAATATAGAACTGAAATAGATGCAGAATATGATCTTGAATCTATTGGAAGCAATACTGAAGAAGTTAAATATGATATAAGTGAGTTGGATGTCGAAGTTGTTGTTCTGACGAAGAAACAGCAGATTGAGGAGATTGAGGCGAGAAGagatacatataattatttgaatagtAGCTATAAATGTGATCGATGCTACAAAGGATTTATAACAGCGGCCACTTATAAGAATCATATGAATAAACACGACCCGGCAAAAGGTGCTTATGAATGTGAGGTGTGCAAATCTCGATGGCCTGATTCAAGATCTCTTCGCGCGCATGTAGCTAACACTCATGAGAGGAAATATACCTGCAAACTGTGTGACTTTGTTTCGCGAtctatACATAGAGCTAGAGAACACAATAAGTGGCATAATGGAGCGACATTCGATTGCAAAATTTGCGGTGCAAGATTCGCGAAATCCACGAGTCATCTCACACACATGAGGTTACAACACCCAACAGATAACTCATGTGAGATCTGTGGGGAATCGTTTCTGGGTGAATTTGGGCTTCGAATGCACAAGAAGAAGGCTCATATTGATGCTAAGCCCATGAAAAGTTCAACATTAATTATATGCGACGGCTGTGGTTCCAGCTTTAAGAATAAGGATGCGATAAAGCGTCATTTAGATGAGGCGGCCGACGGCACATGCAACGCAAGCTGTAGgGCCTGTGCGCATTGCGGTATTAACTGCGACACTGAAGATTCTCTCACGAagcatataaaaaaagaacattcaTTGACATCCTGTTTCGAGTGCAAGAAGAGTTTCACAACAGAACGGTCATACACAGTTCACGTCCAACGCGTCCACCTCGGTATTAAAATGAAACAGACATTCAAACCCAACAAACGCAAAATCGAGAACGTCATCTGCGAGGTGTGCGGGAAGGAATGCAATACGAAATCTTCTTTAATTAACCACCAGAGAATTCACACAGGAGAGAAGCCCTACCAATGTGGACAATGCCCTAAGAAATTCGGAGTCTTGCAACGATTACAGatacaCGTTCGCACGCACACCGGCGAAGCGCCGTACAAGTGTGAGCATTGTCCGAAGGCTTTTAAGCACAAGGCGGCCCTCAACAGACATCACCGGgTTCACACGGGAATCAAACCCTACGTCTGCCCGCAGTGCGGTAAGGCATTCTCTCAATCCAACTCGATGAAACTCCACGTGAACACAGTACATCTCAAGATGCCGGCGCCGTATAGGAatagaaagaaaatttaa
Protein Sequence: MNHLSVCRVCLATENVKLCRIINSNLLTGYELITGTKIKPLDGLPQHICSYCAAMLMKYKSFRDKCCHAQEVLRYMLEQNILLTINDIQNVKQHLNLHPLSIIKNVNIDITIKEEIAEEREEAEIKEELNNVFDVDVKDEYRTEIDAEYDLESIGSNTEEVKYDISELDVEVVVLTKKQQIEEIEARRDTYNYLNSSYKCDRCYKGFITAATYKNHMNKHDPAKGAYECEVCKSRWPDSRSLRAHVANTHERKYTCKLCDFVSRSIHRAREHNKWHNGATFDCKICGARFAKSTSHLTHMRLQHPTDNSCEICGESFLGEFGLRMHKKKAHIDAKPMKSSTLIICDGCGSSFKNKDAIKRHLDEAADGTCNASCRACAHCGINCDTEDSLTKHIKKEHSLTSCFECKKSFTTERSYTVHVQRVHLGIKMKQTFKPNKRKIENVICEVCGKECNTKSSLINHQRIHTGEKPYQCGQCPKKFGVLQRLQIHVRTHTGEAPYKCEHCPKAFKHKAALNRHHRVHTGIKPYVCPQCGKAFSQSNSMKLHVNTVHLKMPAPYRNRKKI*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00875619;
90% Identity: iTF_00875619;
80% Identity: -