Basic Information

Insect: Leptidea sinapis
Gene Symbol: ZBTB41
Assembly: GCA_905404315.1
Location: FR990158.1:7039411-7040877[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0035 0.47 12.1 0.0 2 23 161 182 160 182 0.97

2 11 0.00026 0.035 15.7 1.9 1 23 188 211 188 211 0.96

3 11 3.4e-06 0.00046 21.6 0.5 1 23 219 241 219 241 0.98

4 11 0.0019 0.26 12.9 3.5 1 23 247 269 247 269 0.98

5 11 2.7e-06 0.00036 21.9 0.3 1 23 275 297 275 297 0.98

6 11 0.00015 0.02 16.4 0.8 1 23 303 325 303 325 0.96

7 11 2.8e-06 0.00037 21.9 1.9 3 23 333 354 331 354 0.96

8 11 0.0029 0.39 12.4 0.6 2 23 360 378 359 378 0.90

9 11 0.02 2.7 9.7 5.5 1 23 384 407 384 407 0.93

10 11 0.00078 0.1 14.2 0.3 1 23 413 438 413 438 0.95

11 11 4.3e-05 0.0058 18.2 2.8 1 23 444 467 444 467 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0035	0.47	12.1	0.0	2	23	161	182	160	182	0.97
2	11	0.00026	0.035	15.7	1.9	1	23	188	211	188	211	0.96
3	11	3.4e-06	0.00046	21.6	0.5	1	23	219	241	219	241	0.98
4	11	0.0019	0.26	12.9	3.5	1	23	247	269	247	269	0.98
5	11	2.7e-06	0.00036	21.9	0.3	1	23	275	297	275	297	0.98
6	11	0.00015	0.02	16.4	0.8	1	23	303	325	303	325	0.96
7	11	2.8e-06	0.00037	21.9	1.9	3	23	333	354	331	354	0.96
8	11	0.0029	0.39	12.4	0.6	2	23	360	378	359	378	0.90
9	11	0.02	2.7	9.7	5.5	1	23	384	407	384	407	0.93
10	11	0.00078	0.1	14.2	0.3	1	23	413	438	413	438	0.95
11	11	4.3e-05	0.0058	18.2	2.8	1	23	444	467	444	467	0.97

Sequence Information

Coding Sequence: ATGGATATCATAATGCTATGCAAAATCTGTCTTGAGAAAACAGGTAATATTTCGATTCTCAGCAAAGGAGATGATGGTATACAATACAACATTAAATTGATACGAGTTTTAAAGGTAAAAGAGGAAGATATTCTTCCTAGCGTAGTGTGTGAGTCATGTGTCAGCGATCTTGATATTGCCTATAGATTTGTTCAGAAATACGACGCGTCTGTACAAACGTTAAAATGTCTGAATTCATCAATACATCTTTACTCCgacatacaattaaaaaatgaagCTAGGTGTGACATAGAGAACGAATCAAACGAATTGAAGAGTGAAGAGTTAAGCGACGACCATGACTATCCGAATGACTTCGACAATGATTTGCTATCTGAGTTTCAATCAAGgacaatatttgaaaataatggaGAACCAGTAACACAGACCCATGAGAGTGTTAGAAAGAAGGTTCGGAAAAGAGAAGGTAAAAATCGTGTGCAATGTGTTATTTGTGGCTTGATTACATTAAGTCCTTCCGCTCTCGAGATTCACATGAGAAAACACACTGGAGAGCGGCCATTTTCTTGTGATTTGTGTCACTCCAGATATTCTACAAAGGGTGCTCTTAAGCGTCATTTAGAAGTATATCACTCAGCACACAGAGAGCGTCTATTCACTTGTGAAACTTGTGGCAAAagcttttttacaaaaaatgatatCATCATACATATCCGCATTCACACAGATGAAAAACCATTTTCTTGCAAGTATTGTTTGAAGAAATTTAAACAGGTTACATCTAGAAATAGGCACCAACTCATCCACACAGGGGAGAAGCCCTATGAATGTGGAATATGTAAGAAAAGATTTGCAGACAAACAACTTCTGGCAAAGCATCAGAGTGTTCACAGCGATGAAAGAAAATTTGCTTGTCAGCTGTGTGGTAAGTCTATGAAAAGTAGAGGGGCGCTGAAAGCTCACATGCATCTTCATACTAATGAGAACAAGAGTATTTGTAACATTTGTGGTTGTACATACTCCAATAAAGGCAATCTAATGATACACATGAAAAGGAAACATTCCCACAAATCAGGAGAATGCACCATATGTTCTAAAACATTTTCTGATTTGGAAGGGCACATGCGCAAGCACACTGGAGAGAAACCATTCACATGCAATGTATGTAACAACTCTTATGCTTTTCAGAGGAGCTTGACTCATCATATATTCCACAAACATCAAAATGCCCAGAAGTTTAAGTGTTCTGTTGGCGATTGTAATAAAATGTTTCCGACAGCCAGTATGCTTGAGTTCCATTTGCTGAAGCAGCACACAAACCATACCCCATATATATGCCAGCATTGTTCTCGAGGATTCTTCCGCACCAGTGACCTCTCCCGTCATCTGAGGATCAGCCACATGGATGTGCAGCTCCAGTCACTTAAGTCAATTAGCAAAGAAATGATCTCAGCATCACAGAGTTAG
Protein Sequence: MDIIMLCKICLEKTGNISILSKGDDGIQYNIKLIRVLKVKEEDILPSVVCESCVSDLDIAYRFVQKYDASVQTLKCLNSSIHLYSDIQLKNEARCDIENESNELKSEELSDDHDYPNDFDNDLLSEFQSRTIFENNGEPVTQTHESVRKKVRKREGKNRVQCVICGLITLSPSALEIHMRKHTGERPFSCDLCHSRYSTKGALKRHLEVYHSAHRERLFTCETCGKSFFTKNDIIIHIRIHTDEKPFSCKYCLKKFKQVTSRNRHQLIHTGEKPYECGICKKRFADKQLLAKHQSVHSDERKFACQLCGKSMKSRGALKAHMHLHTNENKSICNICGCTYSNKGNLMIHMKRKHSHKSGECTICSKTFSDLEGHMRKHTGEKPFTCNVCNNSYAFQRSLTHHIFHKHQNAQKFKCSVGDCNKMFPTASMLEFHLLKQHTNHTPYICQHCSRGFFRTSDLSRHLRISHMDVQLQSLKSISKEMISASQS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00875559; iTF_00874696;
90% Identity: iTF_00875559; iTF_00874696;
80% Identity: -