Lsin017262.1
Basic Information
- Insect
- Leptidea sinapis
- Gene Symbol
- CSRNP3
- Assembly
- GCA_905404315.1
- Location
- FR990170.1:6952627-6954798[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1 4.1e+04 -4.7 4.6 99 114 53 68 4 111 0.51 2 2 3e-101 1.2e-96 324.0 8.3 1 218 209 418 209 418 0.93
Sequence Information
- Coding Sequence
- ATGGACCACAATAATTTGGCTTTGGATCACAATCCGGATGCAAAACAAAACTTAGACAGTGATCAAACACAAACAATGCAGAAGGAAAAAGAGGATGGCCTTCTTGTGATAAAAGACGAAAAATGTGACAGTGATGGAAATAGTGAAGTTAGTTGTAATGATGAACATAACAATGTCAACAGTGATATCTATCAGTTTTGTGAGAGAAGTGACAGCAAAGAAGATTATGCTGTTAAAGCGGATGATAATGACACTTTAAGTGACATAGATGATATCAAAACAGATACTGCATCAGCAGACAGTGAAGATTCCGCGCTTGGTAGCCTTCCTTCTGATGGTTCTCTAAATGATAGAGAAGAAGATGTACAAGATCGATCTGATGGAAGTGATTCTGGTATTGGGTCAGAGACTGTTGAACACATAAATTACCATTTACCTGAACCAAGTTCATGTGATGCAGGACCTAGCCTAGCCTGTAACATGCCTAATTATGAAAACCCCATATCTGACAAAAAGAATGACGAAAATAGTGGCcataatgaaaatattgatgTTAAGAGACCTCACAAAAGTAGCCTTAAAAGGAAATGTGATGATGAATGCATTGAAGAACCACttcttaaaaaaagaaaagaaaatattaagtttGATAATGTTACTGTATATTATTTTCCAAGAGCCCAAGGCTTTACCTGTGTGCCATCCCAAGGTGGGTCCACTTTAGGAATGGAATGGAAACACAGTCATATACAACATTTTACACTAACTGAACATGCTTTGGAACAAAGAAGGTTGCATAGACAAATACtgcaacaaataaaattagagcGCCATTCCGGACAGGGTGTCTCTCTTTCCTCTAGTGAAGAAAGTGATACTGAAGAAGAAGCAAGTGACATTTCTGAGTCAGAACTGGACCTAGACAGTTATTACTTTCTTCAACCAGTACCTACAAAGCAAAGAAGAGCTCTATTACGAGTAGCTGGTGTAAGAAAAATTGAAGGGTTTGAAAAAGATGAGTGCAGAGACATTAGAACATCTAGAGAGTTTTGCGGTTGTGCTTGTAAAGGTGCCTGTAATCCACAAACATGTTCGTGTAGCCTTGCAGGTATTAAGTGTCAGGTTGATAGACTTAACTTTCCATGTGGTTGTACAAGAGATGGCTGCTGTAATACGACAGGGCGTATTGAATTCAACCCAATAAGAGTACGAACACATTTCATTAATACACTTATGAGATTGGGTCTAGAGAAGAAAAACGAAGAAAGCAGAGAGGCTGCTAAAAGACAATGGGCGGAACTTCACAGCACAACTACTTCACCTGTATGCTTACCTAACCCATTTGAAACCACTTGCAgtcaaaatattgaaaacaaaacattacACAATCAACACTCATTGCAAATTACAGATACACACATCATTTCAGGCTTTAGTaatatacattgtaatttgAGTAACAGTTCCACACCTCTCAACATAAATGATGGGCATATCAATCAAAGAATGGGTAATGATCTAAACACATTAAACTTTGAAGAAAAATCACAACACCATGATCATAATACCTACACTAATAGTATTCTACAAGGAAAAGGACCACCTTTTCCTATTTCAAACACAGCTTACAACaattcaatacaaaataatatacaaagttATCCATGTGATCTAAATCATTCTTATGATCAACAACATTCCGAGAATAGCTCGAAAGTAACACAAAGCTATTCAGCGTCTAGTTTTGAAGAATTCGCCCAGAGTTCACACATATCAATGTTCAATTCTTATGGTCACATGTATTCTACAGACTATATGCAAAAAGTTAATACAGCGGTACCGGGCCACAGTATACATTACCAAAATATAGCACAAAACCCTTACGATATGTATAAGAATAATGAAAGTGCAGCGGCAAACAGATTGGAACATAACTATCACACACCATTGACAATGCCATATCAAGCTAGTAATAAGTTACAACCAATTGATGAGAATTGGTTTAGTCACAATACCCTGTTAAATCTGGATAATAACTCGGAACAAACAACACAAGATGCAACGGAAACATCTGATGCTCTTGATGCTCCACCTGAAAGTGACACTGCTGAACCAACAGAAAACTTTGGAGagctcattaaaaaaacaatggtAGAGTCTGTTACTGTGtag
- Protein Sequence
- MDHNNLALDHNPDAKQNLDSDQTQTMQKEKEDGLLVIKDEKCDSDGNSEVSCNDEHNNVNSDIYQFCERSDSKEDYAVKADDNDTLSDIDDIKTDTASADSEDSALGSLPSDGSLNDREEDVQDRSDGSDSGIGSETVEHINYHLPEPSSCDAGPSLACNMPNYENPISDKKNDENSGHNENIDVKRPHKSSLKRKCDDECIEEPLLKKRKENIKFDNVTVYYFPRAQGFTCVPSQGGSTLGMEWKHSHIQHFTLTEHALEQRRLHRQILQQIKLERHSGQGVSLSSSEESDTEEEASDISESELDLDSYYFLQPVPTKQRRALLRVAGVRKIEGFEKDECRDIRTSREFCGCACKGACNPQTCSCSLAGIKCQVDRLNFPCGCTRDGCCNTTGRIEFNPIRVRTHFINTLMRLGLEKKNEESREAAKRQWAELHSTTTSPVCLPNPFETTCSQNIENKTLHNQHSLQITDTHIISGFSNIHCNLSNSSTPLNINDGHINQRMGNDLNTLNFEEKSQHHDHNTYTNSILQGKGPPFPISNTAYNNSIQNNIQSYPCDLNHSYDQQHSENSSKVTQSYSASSFEEFAQSSHISMFNSYGHMYSTDYMQKVNTAVPGHSIHYQNIAQNPYDMYKNNESAAANRLEHNYHTPLTMPYQASNKLQPIDENWFSHNTLLNLDNNSEQTTQDATETSDALDAPPESDTAEPTENFGELIKKTMVESVTV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00875316;
- 90% Identity
- iTF_00874472; iTF_00875316;
- 80% Identity
- -