Lsin013575.1
Basic Information
- Insect
- Leptidea sinapis
- Gene Symbol
- -
- Assembly
- GCA_905404315.1
- Location
- FR990165.1:13476632-13478426[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-08 4.4e-05 24.6 1.6 4 43 8 63 7 66 0.85 2 2 7.5 1.3e+04 -2.4 0.0 8 18 150 160 148 179 0.53
Sequence Information
- Coding Sequence
- ATGCCATTATACGCAATAGGATGGACCACTGAAGAAGACGAAAACCTTGTGCAGCTTGTGAAACCTCATTCACATTTATACAACTTATTAGATCCATCAAGGAAAAATATTTTGGGTCGAGAATCAACATGGCAAGAGATCGCCAAAGTTTTGATGAAACCAGttgAAGAATGTAAGAAACGCTGGAGAGGTCTACGGGACAGTTACATGAGAAGCAAGCGCATGGGTGCAATgcacaaaactaaaataagtcTTTTTGAAAATCTTCAATTTCTGGACAGTGTTCCAAATGAATGCTCTGCTAATGACACTAGTGAGATGGTGATTAAGACAGTGACACCAGAGGCACCCAATATGGAAGGCAGAGATATGATAGAAGAAGAGGTGATAACTGACAATGGTGAATACTATGAGATAACGCTTATTGATGGACCTAAACAGACACAAGAAAATCAAACATTTATTAAACTCCTACCTAAAACGGATATAAAATTAGAGCCACCTAAGAAAATTGGAAGGAAAACTGCCGGCAGAAAAAAGTCAGTGCCATTGCCTAGAAATATTACACCAATTAAGATATTACCAAAACCCATTATGACAAACCAGCCAAAACTAATAAGCTATGTAGAGGAACCAAAAACCCCTGAACAAAGATCTCAGactattgataaattaataGAGCGAATGCTAAAGGAAAACACAAATGAAATAGATGTCTTCTTCAGAAGTATGGCTGCAAGTGTTAAGAAATTAAAACCAAGTTTAATACCAAAGGTAAAAATGGAGGTTTGTAATGTCATTGCTAAATATGAAATGCAGAGTTTTGAGAAGAATAATCAAGATTAA
- Protein Sequence
- MPLYAIGWTTEEDENLVQLVKPHSHLYNLLDPSRKNILGRESTWQEIAKVLMKPVEECKKRWRGLRDSYMRSKRMGAMHKTKISLFENLQFLDSVPNECSANDTSEMVIKTVTPEAPNMEGRDMIEEEVITDNGEYYEITLIDGPKQTQENQTFIKLLPKTDIKLEPPKKIGRKTAGRKKSVPLPRNITPIKILPKPIMTNQPKLISYVEEPKTPEQRSQTIDKLIERMLKENTNEIDVFFRSMAASVKKLKPSLIPKVKMEVCNVIAKYEMQSFEKNNQD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00874419; iTF_00875260;
- 90% Identity
- iTF_00874419; iTF_00875260;
- 80% Identity
- iTF_00875260;