Lsin020025.1
Basic Information
- Insect
- Leptidea sinapis
- Gene Symbol
- -
- Assembly
- GCA_905404315.1
- Location
- FR990173.1:12515243-12522981[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.033 55 5.1 0.0 23 46 222 244 200 244 0.88 2 3 0.0014 2.4 9.5 0.0 4 43 294 342 291 345 0.75 3 3 7.4e-05 0.13 13.6 0.1 4 41 443 491 441 496 0.82
Sequence Information
- Coding Sequence
- ATGGATAATATAGATCCTATTGTTATGAAGTCAGAAATACAACCTAATGGTGATATTCTTCTATTTTACGTGGAAGATAATCAAGATGACACAGGAATTAGTGTGCTGGATGAGAACCAACAAGAGGATATACAAATGCTATCGGAGGCTAAGTATGTCATTGAAGATAGTGGAGAAAGTGAATCTGCTGATGAACTTGACTTAGCTCAAGCCAGTGACCAGTATGCTGCCGAACAATGGCTTGACGAAGAAATCAGACGACTTATTGTATTCTATCTTGACAATAAGGAAACATTTCAGAGCGGTACCACTAAAAAGAAACATTTATGGGCAGTTGCATACTTGGATATTGACTGGCGATATATTGAtgcttttgaaaaaatatttgatcatGGCAATGATGTTAATCTACTGAATGGATATGACAgattgaaaaagaaaaaagatgaGTTTTCCGGTAAAGTTGGAGTGAAGAAAATTACAATGAAGGATGAGAGTGATGCAAAAACAGATGGTACTGATGATGAGGTATCATTTGATGAAGGAGGTTTCACTTTGCGCACGAAACGACGCCACGGTGAAGAGAAAGCTACAAAAATACTagactattatttaaaaaacaaagatAAGTTTAACTCTCCGCTTTACAAAAAACTTAATCTTTGGGAAGGTTTGGCGAATAAAATTGGTGTCACCCCTACTGAATGTGCTCACAGATTCCGGAACCTCAAACAAGTATATATAGCATATGTTCAGCGAGAAATGAGTAAACCAGAAATGCCAATTACATGGCCCTACTATGCACAATGCAAGAAAGTCTTCGGATACAGAGTGATAAAGGCCAAATATAAAAACAAGGACCTGTCTTACTGTCAGGATTGGACTGCCAGagaaataaaaaagctattgattTTTTATGGTGAAAACTGTGAtagtattgataataatatagatGAAATTAGTTTATGGGATAGTATTGCTGAAGAACTTGGCCAAACACCATCAAGTTGTAGTCGGAAGTTTTTCGAACTTAGAAAGTCATATAAGAAGTTGAAAACTATGAAAGCTAATAATCCTGAAACAAAGATTTCTTGGAAGTACTTTAGTATGATGGatgagatttatttaaaaaaggaaaaTCGGGCTAATATGATGATAGATGGTGATTTAGAGTGTAACTCTCTTGATATAATGGATGATGATGAGTACCAATGTATAATTGTGATCCCAGAAGGGGAAGATATAAGTAAAGCGCGTATCATATATCAACACAAAAACGACACTCAGCAAATAGATGAACATGGTCTTAAAACAAACTCTGATATTTGGAATaaggaattaaaaaaacaactactCTCACAATaccttaattatattatggcTTGTGGAAATGAGAAAAATGATACTAAAGAGATGTGGGCAAGAATATCAAACAATATGAGGGGAAAGAGTCCTGACTCTTGTCGGAAAATGTATTTGTTGTTGAAGAAAAGACACAAAAATCTTTCTCACGAAGCAAAAAATGTAAAACCAtatgtagatatttttaaaaagattttgCTGCAAGAAccaaattttaaaaagaaataccaagaaaacAAAGTGTTCACAGATGTAGAATTAAATGATGAAAAAGTTGAAACAGCTTTAAGGTATTATTTAGAGAATATTGAAGAGTTTGTCAATACAAAATATGACAAGAAAATTTTATGGAATGAATTAGCTCGGCTTACTTCAGAACCAATCAAGAAAGTTTTTAGGAAaattaactatttaaaacaatcatataaatgtattaatacACCTTTTAAGGAGTTGTTAGATGAAATAACAGAAAAAGAAAATGATcttaaaaatagtattatagcTATTGAAAATTCTAGTCAAGATGATAAATCGTATATTTGGACTGATTTGGATACTGAGAGACTGTTAACTTGGTATTTGGCACATTTGGATAAGTTCAAAAATCCTAAACATGTGCGTAGTTTTTTGTGGATGGAAGTATCAGATATACTGAAGAAAAGTCCATTAGATTGTTCTAAGAAGATGTCTGAGATCCGATCTCAGTACAGAATAATGGTAAAAGAAACACCTGAAAAACTCCAGGAATGGAAATTCTATAATTTATGTCAACGAATTTATGGTATTGGAAAAAAGATCATGGAAACAAATGATTGA
- Protein Sequence
- MDNIDPIVMKSEIQPNGDILLFYVEDNQDDTGISVLDENQQEDIQMLSEAKYVIEDSGESESADELDLAQASDQYAAEQWLDEEIRRLIVFYLDNKETFQSGTTKKKHLWAVAYLDIDWRYIDAFEKIFDHGNDVNLLNGYDRLKKKKDEFSGKVGVKKITMKDESDAKTDGTDDEVSFDEGGFTLRTKRRHGEEKATKILDYYLKNKDKFNSPLYKKLNLWEGLANKIGVTPTECAHRFRNLKQVYIAYVQREMSKPEMPITWPYYAQCKKVFGYRVIKAKYKNKDLSYCQDWTAREIKKLLIFYGENCDSIDNNIDEISLWDSIAEELGQTPSSCSRKFFELRKSYKKLKTMKANNPETKISWKYFSMMDEIYLKKENRANMMIDGDLECNSLDIMDDDEYQCIIVIPEGEDISKARIIYQHKNDTQQIDEHGLKTNSDIWNKELKKQLLSQYLNYIMACGNEKNDTKEMWARISNNMRGKSPDSCRKMYLLLKKRHKNLSHEAKNVKPYVDIFKKILLQEPNFKKKYQENKVFTDVELNDEKVETALRYYLENIEEFVNTKYDKKILWNELARLTSEPIKKVFRKINYLKQSYKCINTPFKELLDEITEKENDLKNSIIAIENSSQDDKSYIWTDLDTERLLTWYLAHLDKFKNPKHVRSFLWMEVSDILKKSPLDCSKKMSEIRSQYRIMVKETPEKLQEWKFYNLCQRIYGIGKKIMETND*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00874417;
- 90% Identity
- -
- 80% Identity
- -