Lsin033982.1
Basic Information
- Insect
- Leptidea sinapis
- Gene Symbol
- -
- Assembly
- GCA_905404315.1
- Location
- FR990195.1:2623677-2627275[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.8e-06 0.0031 18.7 1.1 1 44 247 292 247 294 0.94 2 4 6.4e-10 1.1e-06 29.8 0.7 2 44 301 347 300 349 0.93 3 4 8.6e-09 1.5e-05 26.2 0.0 1 43 353 395 353 397 0.97 4 4 4.3e-07 0.00072 20.8 0.0 4 43 406 447 405 449 0.92
Sequence Information
- Coding Sequence
- atgaataatataatatttgatagtGAAGGTGAGGTGCAAGATTTTCCGCGCCTTAAAGCGGCTCTCAAAAAAAACGATATATCAATTACTCAGCAACAATCACAATTGAGCGTTGGTACACCTTTAATAACTAATAACTCTCAGTATTCGTCCTCTGATGTTGATACGGCAATAACACTTAATTTACTCTATGATAAAAAACTAAAAGCACTTGAAAATACAATAGTAAATCGATTACATGAATGTAGAAAAAGTCTACAAGAACTACAAAATACTGTAATACATAAAAGTCATAATGCCAATTTCACCATCTTGAATTGTGGAAAACCATACTTTAAAGACAAGTTTGGATTTCCTGCCCCAAGTAATGTAGATACATTTAAACGGGCTAATGCTGGAATGTACGATTTTACTAACATGTCAAACATACAAGGTTGGACAGTACAAGACAAAAGTGAATTCATGAAGAAAATACTTGAAATGTCtcgaaaaataaaacaaaaggaATTAGAATCAGCACTTGCTAAAGCCAAGTCTAACAAAAGGTCacagaataaaaatgaaatagaacAAATAAAGATTGAAATAAGAAAAGTAAAGAAAATGCCTCTAGAAGATGTAGTTCTGCCTGTTAACAAAGACTATGATTGGGAACAAATAGCCATAGAAATGAAATATAGACACAAACCTCAAGAGTATAAAGCTTTGTGGAACTTATTTTTGCACCCTTCCTTTAATAAAGGGCCATGGGCTAAAAAAGAGTGTTGGAGGTTAGAGAAAATATGTTCTCAAAAACAATATCAAGACTGGGATAGTATTGCAAAGGAGCTTAGGACAAACCGGACTGGGTACCAGTGTTTTGTGTACTACCATACTAATATCAATAATACTTTTACATCAAAAGAGTGGACAAAAAAGGAGGTAGAGCATTTAAAAAGATTAGTTGAATTCCATAAAGAACATGATTATATACCATGGACTAAGATTGCTGCCTGTATGGAAAACAGAACTAGAATTCAAgtgtataataaatttattcagtTAAATTCAAAAAGAAAAGGGAGATTTATTCCTGAAGAAGATGCAGTAATTATAGCTTGTGCTGATAAATTTGGAcctgattttaaaaaaatgaaaatgtatttgcCTGGCCGTTCAGTACCTCAATGTAGAgtcagatataatattttggccAAGCAGAAAACATCCATAACTTGGACCAAGCAGGAGGACAGAAAACTTATGCAACTTGTGGCTAATCAAGATTCACCAACAATTTTTGCAAGCTTGACTAAATATTTTCCTGGTAAAGATAGGTATCATTTAAGATCTCGATACAAAGTTCTGACTAAGTGGATAGAAAAGAATCCAAATGTTGATTTTGCATATGCACCCAGGCGTCCAGCTAGATGCTTGGTTCATGGTAAtgaatctttaaatttaaagaaagcCCTTGAAAACTTGAAATTAAGAATGCAGGATAAGTTACAATCGGAAAAAGACAAAACTATCACACTTCAGTCCTCAGAACAGAAAATAGATGAtgcaattataaattatttacttaaggagaaaatttcatataaaaatattgcaaaacaaAAGTCTCAAAGGATTATAAATAGCCCAATACCAGAAGataaaaactttttgaaaataGAAGATGAATCAGATATTTTAACCAAAAAGTCTGTTAATTTTAGGAATGTACGGCAAATCCTAGTTCTTCTCCGAGCAAAATTAGATAAGCAGAAGTTTATGGATAGTAAATTGTGTAAGCGATTTCCAGATTTATTACATTTAgataatcatttatatatatcaaaGCTTAAATCATATTCAAAACAGAAGAAACTGTCACcagatgatattaataaaaaagttgtaCCGGACATCTGGGGACAGCATCCCCTAGGTAGTTTACAATATGTTTTACCACCAAATCTTGCTACAATAACTGGATGTCGTCTTATATTGGAGTCTTTACCTGACCACCCATATAGAAAGAGACCCTTGCAATGTCTCCATAAAAACGCTAGTatagaagcgggcggttccggtcaccttctggacgtgaggcctgaaggtgagttgggagtcgaggTTCACACACAAGTACTTGGCTGTGGACCTGAAGGGGGTCACCAACTGTTCTGCTACCGCTTATATAGCGGTCTGTCGGCTGCTAGTAGGGAGAGGTGA
- Protein Sequence
- MNNIIFDSEGEVQDFPRLKAALKKNDISITQQQSQLSVGTPLITNNSQYSSSDVDTAITLNLLYDKKLKALENTIVNRLHECRKSLQELQNTVIHKSHNANFTILNCGKPYFKDKFGFPAPSNVDTFKRANAGMYDFTNMSNIQGWTVQDKSEFMKKILEMSRKIKQKELESALAKAKSNKRSQNKNEIEQIKIEIRKVKKMPLEDVVLPVNKDYDWEQIAIEMKYRHKPQEYKALWNLFLHPSFNKGPWAKKECWRLEKICSQKQYQDWDSIAKELRTNRTGYQCFVYYHTNINNTFTSKEWTKKEVEHLKRLVEFHKEHDYIPWTKIAACMENRTRIQVYNKFIQLNSKRKGRFIPEEDAVIIACADKFGPDFKKMKMYLPGRSVPQCRVRYNILAKQKTSITWTKQEDRKLMQLVANQDSPTIFASLTKYFPGKDRYHLRSRYKVLTKWIEKNPNVDFAYAPRRPARCLVHGNESLNLKKALENLKLRMQDKLQSEKDKTITLQSSEQKIDDAIINYLLKEKISYKNIAKQKSQRIINSPIPEDKNFLKIEDESDILTKKSVNFRNVRQILVLLRAKLDKQKFMDSKLCKRFPDLLHLDNHLYISKLKSYSKQKKLSPDDINKKVVPDIWGQHPLGSLQYVLPPNLATITGCRLILESLPDHPYRKRPLQCLHKNASIEAGGSGHLLDVRPEGELGVEVHTQVLGCGPEGGHQLFCYRLYSGLSAASRER*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00875250;
- 90% Identity
- iTF_00875250;
- 80% Identity
- -