Lsin033983.1
Basic Information
- Insect
- Leptidea sinapis
- Gene Symbol
- -
- Assembly
- GCA_905404315.1
- Location
- FR990195.1:2644034-2646232[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3.1 5.2e+03 -1.2 0.0 22 32 221 232 217 246 0.74 2 5 2.1e-11 3.5e-08 34.6 0.3 1 44 252 297 252 299 0.94 3 5 3.1e-11 5.2e-08 34.0 0.4 2 44 306 352 305 354 0.93 4 5 3.5e-11 5.9e-08 33.8 0.0 1 43 358 400 358 402 0.98 5 5 1.8e-06 0.003 18.8 0.0 4 45 411 454 410 455 0.92
Sequence Information
- Coding Sequence
- ATGAATCTGATGTATGAAAGTGATTGTGACTCGCAGGATTTGCACCTCCTTAAAGCCGCCATCGAAGAAAATGatatagaaatagaaatgatcGAAGAGCAATCGCAATTAAGCGCTGGAACATCTTTAATAGCTTGTGATTCACAGTATTCGACTTCTAATAATGATATTGCCATCACGCTTAATTTACTCTACGATGAAAAACTAGCAACGCTCGAAAAAACATTGATAAACAGATTACAAGAATGTAGAAAACGATTACAAGAAGTACAAAACAAGTCCATAAATGACAGTGATAATTCTATCACACACAGAAGGTCCAATTTTTCGGTCGTGAATTGTGGAAAACCATACTTTAAAGATACGTTTGGATTTCCTGCACCTCCTAATGAAGATACATTGTTACGGTCTCAGGCTGGTATGTacgattttactggtttctCAAGTATACAAGGCTGGATGGAACGAGATAAATGTGAATTTATGAGGAATATACACGAAATGTctcaaaatataaaacaaaaagaatTAGAATCAGCACTCGCTAGAGCCAAGCGTAACAAAGGGCCAAAAAAGGAAATAGATAGAATAAAAATGGAAATaggaaatgtaaagaaaatgcCTCTAGAAGATTTAGTTTTGCCTGTGGATAAGGAATATGACTGGGAACATGTAGCGAACCTAATGAAATATAAACACAAACCGCAAGAGTATAAGGCTTTGTGGAACTTATATTTACATCCTTCATTTAATAAAGAGCCTTGGACTAAAGAGGAGCATATGATATTAGAGAGAATTTCTGCTGAAAAACAACATCAAGACTGGGAGAGTATTGCAAAAGAGCTTGGGACAAACAGGACGGGCTACCAGTGTTTTGTGTACTTCCGTACTAATATCAATAATAGTTTTACATCAAAAGAGTGGACAAAAGAGGAGGAAGAGTATTTAAAAAGATTAGTTGATTTCTATAAAGAACATGATTATATACCGTGGGCTAAGATCGCAACCTGTATGGAAAACAGAACTAAAACTCAAgtgtataataaatttattcaattaactTCATTAAGGAAAGGAAGATTTCTTCCAGAAGAAGATGCTGTAATTATAGCTTGTGCTCATAAATTTGGGACAAATTTCAAACATATGGCAAAGTATTTACCTGGTCGTTCAGTACCCCAATGTAGAGTCAGGTATCAAATTTTGACTCGGGCAAAAACATATATAACATGGACTGAGGAGGAAGATAAAAAACTCATGCAACTTACAGCTAATCAAGATTCACCAACAATTTTTGCAAGCTTGAAAAACTACTTTCCTGATAGAGATAGATCTCACTTACGATCTCGATACAAAACACTAACTAAATGGTTGAGACATAATCCAAATGTAGACATTAAATATGCTCCTAGACGTGAAGCCAGAACCTTGGTTCGAGACAaatcaactttaaatttaaagaaggctgttgaaaatttgaaaattagaATGCAGGATGAGTTGCAAGTGAAAGAAAGTAACACAATCACATTGCAGTCCACAGAGCAGAAAATAGATGAtgcaattgtaaaatattttgtaaatgagAAAATTACTTGCACAgatattgaaaaacaaaacccTCAATGCATAGATAGTCCAAGTTCAGCAACCATGACTTACTTAAAGATTGACAATCAACctgaatatttaacaaaaaagaatattaattttaagaatgttaGGCAAATCCTAGTTCTTCTCCGAGCAAAGTTAAACAAGCAGTTGTTTATGAAAAGTAACTTAAGTAAGACATGCCCAGAACTATTACTTTTAGATAGTGATGTGTACACCTCTAAAGTTAAATCATATTCAAAAAGGCAAAAGTCATCAACAGAGAATATTGACAAAACAGGGATACCCAATATCTGGGGAGAGCATCCTCTAGAtagtttcaaatatattttaccacCAAACCTCGCTACAATTACTGGCTGCCGACAGTTATTAGACCATATTcaagtacctacacaaaaaaggaaACCTCAAATAAAAAACTTCAACCAAAATAGGAGTTTGCAAAGAGAAATGACACTTCTATTAGAACGGTTTTATGTGTTATTTATATGGCCTATACTACTGTCAAAGTATGTTGATAATGATGAAAAGGAAATAAATCAATCTTCTAGTCAAGAAACTACAAACAATCAAGCTAACTAA
- Protein Sequence
- MNLMYESDCDSQDLHLLKAAIEENDIEIEMIEEQSQLSAGTSLIACDSQYSTSNNDIAITLNLLYDEKLATLEKTLINRLQECRKRLQEVQNKSINDSDNSITHRRSNFSVVNCGKPYFKDTFGFPAPPNEDTLLRSQAGMYDFTGFSSIQGWMERDKCEFMRNIHEMSQNIKQKELESALARAKRNKGPKKEIDRIKMEIGNVKKMPLEDLVLPVDKEYDWEHVANLMKYKHKPQEYKALWNLYLHPSFNKEPWTKEEHMILERISAEKQHQDWESIAKELGTNRTGYQCFVYFRTNINNSFTSKEWTKEEEEYLKRLVDFYKEHDYIPWAKIATCMENRTKTQVYNKFIQLTSLRKGRFLPEEDAVIIACAHKFGTNFKHMAKYLPGRSVPQCRVRYQILTRAKTYITWTEEEDKKLMQLTANQDSPTIFASLKNYFPDRDRSHLRSRYKTLTKWLRHNPNVDIKYAPRREARTLVRDKSTLNLKKAVENLKIRMQDELQVKESNTITLQSTEQKIDDAIVKYFVNEKITCTDIEKQNPQCIDSPSSATMTYLKIDNQPEYLTKKNINFKNVRQILVLLRAKLNKQLFMKSNLSKTCPELLLLDSDVYTSKVKSYSKRQKSSTENIDKTGIPNIWGEHPLDSFKYILPPNLATITGCRQLLDHIQVPTQKRKPQIKNFNQNRSLQREMTLLLERFYVLFIWPILLSKYVDNDEKEINQSSSQETTNNQAN*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00875249;
- 90% Identity
- iTF_00875249;
- 80% Identity
- -