Lsin006143.1
Basic Information
- Insect
- Leptidea sinapis
- Gene Symbol
- Myb
- Assembly
- GCA_905404315.1
- Location
- FR990156.1:18553839-18569927[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.4e-17 5.8e-14 53.1 1.0 1 45 44 88 44 89 0.97 2 3 5.1e-21 8.6e-18 65.3 1.4 1 46 95 141 95 141 0.98 3 3 9.7e-20 1.6e-16 61.2 0.6 1 44 147 190 147 192 0.96
Sequence Information
- Coding Sequence
- ATGGAATCATTTGTTAATTACAGAAGAAGCGGCTATGTCACAGAATCTAGCGAGTATAGCAATGATTCAATGCCGAACGACGATGGGCAGGCTACAACCAAAAGTGCTGGGTCGAGGAAGAATTGCAACAGGGGCAGGTGGTCGAAAGAGGAGGATGAGCTTTTGAGGATGTACGTACAGAAGTACGGGGAAAACTGGGACGTGATATCGTCACACTTCCGAGAACGATCGGATATGCAGTGTCAGCAGCGGTGGACGAAAGTCGTCGATCCGGAACTAGTCAAAGGACCTTGGACCAAGGAGGAAGATGAACAGGTGGTTCAATTGGTCGCCAAGTATGGCCCAAAGAAGTGGACTCTTATAGCCCGTAACCTTAGAGGCAGGATAGGAAAACAATGCAGAGAAAGGTGGCACAACCACTTAAATCCAAGTATAAAGAAAACAGCGTGGACGGAGCACGAAGACAGAGTGATATACCACGCGCACAAGCAACTGGGTAACCAGTGGGCGAAGATTGCCAAGTTGTTACCCGGCAGGACCGATAACGCAATTAAGAATCATTGGAACTCCACAATGCGGCGCAAGTACGAGCCCGACCGTATGGACTCGTTCGTGTTCCGGCGCCGGCTGGCCAGGACACGGCAGGAGACGGCGGCCTCTCCCGGCAACGAGAGGAAAGAGAATGCGGCCAAGGTAGCCGTCACCTATAACGatAGCTGGTCAGCAACCCCGGACCCGTTCAACGAGTCCCCGCACAGCAACTCGTCTCACACGAGCCAGCCATCCAAGCAGGTGCTCCACTTCCGCCAGCTGCTCAAGGAACAGCTCAACAGTCTGCAGCGACGCTCTCCGGACAGAGGAGGCCTCGTGCATGCCGATACTGTGGAGATCGTGGAGTCTACAGGCGCATCCAACTTGAAATTCGTTAACATAGACACATTGCCCGAGTTAATATCTCCTATCAAGAGCTATTTATCACAACCTTCGGAAGCAACCAACGATGAAAATAAAGTGAGCTTCTCGACAGTCCCCGATTGCAGCGAGGATTTGATCGTACCGTCGGTGTACGAGCCCTCCCCGGCCGCGGCCCGGCGCCGCTCGGACCAGCCACCGACCAACAGTCCGCCGCCCATACTGCGCCGCGCGCGGAACAAGAAGCAGCACAATATGTGGTCGGAAACAATAAAAGCCATGGAGGGAGTGACTCCTATCAAGGCGCTGCCGTTCAGTCCGTCACAGTTCCTCAACTCGCCCGCGACCGTCTCCTTCACTAACAACGAAACGCCCGACAGACGTCCTGCAGAAAAGgAATGGACGGCAAGTCCTTTGCTACAAACACCAACACCAGCCAATATTACTCCGGGCGGCACCTCCAAGAAAACTCCTAAAACTCCAACACCATTCAAGCTGGCGATGGCGGAGCTGGGAAAGAAGTCCGGGTTGAAATACTCTCCATCCAGTCCTGGAGTGTTGGTAGCTGACATCACAGAGATGATCCAGCGAGAAGAGAGTGCCAACAACGACTCTGCCGTATCCACCGAGAATGAAACACAGGTATGTGCTCAATAG
- Protein Sequence
- MESFVNYRRSGYVTESSEYSNDSMPNDDGQATTKSAGSRKNCNRGRWSKEEDELLRMYVQKYGENWDVISSHFRERSDMQCQQRWTKVVDPELVKGPWTKEEDEQVVQLVAKYGPKKWTLIARNLRGRIGKQCRERWHNHLNPSIKKTAWTEHEDRVIYHAHKQLGNQWAKIAKLLPGRTDNAIKNHWNSTMRRKYEPDRMDSFVFRRRLARTRQETAASPGNERKENAAKVAVTYNDSWSATPDPFNESPHSNSSHTSQPSKQVLHFRQLLKEQLNSLQRRSPDRGGLVHADTVEIVESTGASNLKFVNIDTLPELISPIKSYLSQPSEATNDENKVSFSTVPDCSEDLIVPSVYEPSPAAARRRSDQPPTNSPPPILRRARNKKQHNMWSETIKAMEGVTPIKALPFSPSQFLNSPATVSFTNNETPDRRPAEKEWTASPLLQTPTPANITPGGTSKKTPKTPTPFKLAMAELGKKSGLKYSPSSPGVLVADITEMIQREESANNDSAVSTENETQVCAQ*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00874404; iTF_00875248;
- 90% Identity
- iTF_00874404; iTF_00875248;
- 80% Identity
- -