Lsin030572.3
Basic Information
- Insect
- Leptidea sinapis
- Gene Symbol
- kn
- Assembly
- GCA_905404315.1
- Location
- FR990188.1:7294223-7309133[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.8e-141 5.7e-137 458.6 0.0 182 387 5 228 2 233 0.99 2 2 8.2e-08 0.00048 19.7 7.2 420 569 237 393 229 407 0.66
Sequence Information
- Coding Sequence
- ATGAAGAGCGGAAGGTTTTTCCTCAAGTTCTTCCTCAAATGTAATCAGAATTGTCTAAAAAATGCTGGTAATCCACGCGATATGAGAAGATTTCAAGTGGTGATATCAACTCAGGTGATGGTGGATGGTCCACTACTCGCAATTTCAGACAATATGTTCGTTCACAATAACAGCAAACACGGCCGGCGCGCGAAAAGGCTTGACCACACCGAAGGTATTGACGCGAACATCGAGCATAATTCCGGATTATATCCACCGTTGCCAGTAGCAACGCCGTGCATCAAGGCAATATCTCCCAGCGAAGGTTGGACGTCGGGGGGGTCGACTGTTATTATAGTGGGGGACAATTTTTTCGACGGACTTCAAGTTGTATTTGGTACTATGCTTGTCTGGAGTGAGTTAATAACATCGCACGCTATACGAGTACAAACACCGCCGCGGCACATACCGGGAGTTGTGGAAGTCACATTATCATACAAGAGTAAACAGTTCTGTAAAGGTGCTCCGGGAAGATTTGTTTATGTTTCAGCTCTCAACGAGCCCACGATAGATTACGGATTTCAGAGGCTACAGAAACTTATACCAAGACATCCCGGTGATCCGGAGAAATTGCCAAAGgaaataatattgaaaaggGCTGCAGATTTGGCTGAGGCATTGTATTCAATGCCTCGCAATAATCAGCTAGGACTTGGAGCGCCTCGATCTCCATCATCCAGCATGCCCTTCAACTCCTACACGGGACAGTTGGCTGTGAGCGTCCAGGATACTGCTGCAGCGCAGTGGACTGAAGAAGAGTACGCTCGTAGCGGCGGTGGTTCCGTCTCACCGCGGTACTGCTCAGCCGCGTCAACTCCACACGCGCCGTCCTACCCTCATCCACAGCATTACCCTGCGCCCCCCACCTCGCTCTTCAATACCTCCTCACTGTCTCTGGGGCCGTATCATCCAGCGAATATGAATGGGCATTTATCTTCTGACCATCAGCACTATAAcgcgtataatataaaagatagcGGGCATTACTGCGATAGAAACGATTCAAAAGCCGATGACTGTGCCGCAAACACTCATTCAAAATTCAACGGCAACATGAAAGATCAAGCGAGTAAAGAGAAGAAAAGCGCTTTTGCTGTAGTAAAACACAGCCCACCTCGCGTTCCCAATTTTCAACATCAACAAAATTGGCAACATCTCACCGTTCAATTCTCATCACCGTTCAGTGTGAATCCGTTTTCGTTACCAACTTGTAGTGCACAACAATATGCCCAAACTGCCCCACTTGCATCTAAATAG
- Protein Sequence
- MKSGRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDHTEGIDANIEHNSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPSSSMPFNSYTGQLAVSVQDTAAAQWTEEEYARSGGGSVSPRYCSAASTPHAPSYPHPQHYPAPPTSLFNTSSLSLGPYHPANMNGHLSSDHQHYNAYNIKDSGHYCDRNDSKADDCAANTHSKFNGNMKDQASKEKKSAFAVVKHSPPRVPNFQHQQNWQHLTVQFSSPFSVNPFSLPTCSAQQYAQTAPLASK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00036409;
- 90% Identity
- iTF_00874240;
- 80% Identity
- -