Lsin023993.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leptidea sinapis
Gene Symbol
ARID4B
Assembly
GCA_905404315.1
Location
FR990179.1:6569568-6595884[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.7e-30 1.9e-26 93.4 0.1 1 89 302 388 302 388 0.96

Sequence Information

Coding Sequence
ATGATTTTGAAATTTGTTGATTGTATTGGTGCACCGAATGCTATCTTTTACGTAGTTCAAAAGCAAGGTGATGATCCACCATACTTACCAGTTGGCACTGATGTAAGTGCCAAGTACAAAGGAGCATTTTGTGAAGCTAAAGTTAAGAAAGTTGTTCGTAATATAAAATGCAAGGTGACTCTAAAGGCTGGGGGTATAACTACAGTTAATGATGATGTCATTAAAGGCACTCTTCGAGTTGGTAGTACAGTTGAAATTAAACAAGACCCCAAAAAAGATCCAATTGAAGCTGTTATCTCAAAAATTCAAGATTGTAGCCAGTACACTGTTgtttttgatGATGGTGACATCACAACTCTACGGCGTTCAGCACTGTGCTTGAAAAGTGGGAGGCATTTCAATGAAAGTGAAACATTGGATCAACTGCCACTCACACACCCCGAACATTTCTCCACACCAGTGATAGCTGGAAGAAGAGGAAGGAGAGGAAGAGCTcaATCTGATGAGAGTGAGGGAGAAGGCAGTATTCGTTCCATGAAGGCTGACAGTGCAGAAAGAGAGCCTCACGTTGGGCGAGTTGTTCTGGTAGAATCAGCCAGTGGTGCAGAGAGACGTCGACCTCATCAACCTGCGTTTCCTGCGCTCGTTGTAGCGCCAACTGCTCAGATCAAAGTCAAAGAGGATTATCTTGTGAGGTCCTTCAAAGATGGCAGATATTATACAGTGCCAAAGAAAGAAGCGCGCGAATTTCGCAAGGGAAGCGCACCTCCAGAATGGTGTGGTGTGGAGGCCGcgctacaatatttaaataacggCGTCCTGCCGCCGCACTGGGACCGGGATTCGTTGTTCAATGAACCAAGAAATACTTCAGATGATAGTTCCGATGATGAACCACGTGAGGAGAAAGACCATTTTGTGGCGCAGCTGTATAAGTTTATGGATGACCGGGGCACACCTCTCAACCGCAATCCAACCATTGCAAATAAAGACATAGATCTCTATAGACTATTTAGaGTTGTGCAGAAACTTGGAGGCTATAATCGTGtcacaaatcaaaatcagtggAAGTCGATAGCTGATAAAATGGGCTTTCATCCTGTCACCACTACTATTACGAATCTTTGCAAACAGGCATATAAAAAATTCTTGCACAGCTTCGAGGACTTCTACCGCAAGTTAGGCGTGACGCTAGTAGCGCATCCCCGCGGCGCTCGAACTCCGCCCGCCGGCCGCTCGCTCATCCGTGACAGAGACAAGCAGCTACCTCCTGCCACGGGACCAGCCACCTCCACCGGATCAACCACCACCACATCATCCACTCCCAGTACCTCTAACGCTTCTACACCAACATCCACATCTACCTCGACGTCTCTgAGGAGTAAGGATAAAGATTCAGACAAGAGTGAGACAGAAAAAAGTGAAAAGAGTGAGAAGGAAGAGAAAATCGAGAAGCCGAAGGAGAAACCTGTCAGTGATGAGGAGGATAGTGCGGATAATCAACCCTTGGTACCAGTCAGTACTGCTCATAAAATTGAAAAAGAGAAAGACAAAGAAAAGGACAAGAGTTCAACAACGAGCGAAGAAAAGGTTCCTGTCAAGTCTAGATCTCAATCCAAGACCCGAAGCTTGCCTCCAATCAAGACTGAATCACATGAGAGAAGAACCCCTAAGCGGAGGCCACTGTCTTCTAAGTTGGGTGAGAGTTTTGGTGGAACGACCCGCGCATCCCGACGTCCACACGTTTCTACCGACAGTGACAGCTCGGGTCGGGCGTCCAGATGTGGTATTACAAAGAAGATGCAGAGTCGTCGCAGTCAAAGTGCAAACTCTGCGAGTAGCGGCAACACGATCGCGTCCAACGGCAGCAAACGACCTCGTAAGAGAAAGAGTACAGAACCTTCGTCGAATGAGCCCACTCGCGCTCGAGGCTGTAATGTCAAAGCGCAAGTCGGTGATAAATTGAAAGTTTACTACGGGCCTACACAGTCGGAGTCCAAGGTGACATACGAGGCTAAAGTGATCGAGATATCGCGTGAGGGAATGTTGCGCGTGCACTACACGGGTTGGAACACGCGTTACGACGAGTGGATCAAGCCGCAACGTATTGCGCTCAACGTGACGCAGCACGAGGCGACCAACAAAAAGAGTGGAGGAGGTAATCGTCGTGCGAGAAGTAAAAGATCTGAagAATCTACGGCTCGTTCAGACAGCGACAGTGATTCTGATAGCGATTTAGATGTAAAAAGGCTGCCCAAGAATCCAGATGATAAGTCAAGTATAAAAACTCCTCCGATCTCCAAAGATGCTAAATCGAGTGACAGTAGTGGTTCGAGTAAGCCACGCAAAAGACCCAGTAGAACTGTTTCCACTACATCAAGTGTTTCACCAGCCAAAAAGCCACGGACGACGAGTAATACAACCCAACATCAACATCAAGGTCGCGATTATGATCTTAATGAAATACGTTCCGAATTGAAAGGATTGCATTCTGTGAAACAAGAACTTGAAGAAGTAATTAAAACTGAAAATCAACCAAATGAAACAATGCTAAGTGCAGTTGCTACGACTTCAGTCCCTGCGCCAGAACCTGTTCAACCAGAGAAACATGCTGAAGATGTTTACGAATTCAAAGAACCTGAGCCATTTGAGTTTGAACTACATGAtgagaaaaagaaaagaatGCATCGCATATTTGATGATATCTCTCCGACAAAATATACGTCGACATTATCTAAGTCGTTGAGTGAAGAAATATCAGAGGAGGCTTTAAGACCAAGACCTCCGTCTTTTAGATCTCCATCGTTATCTCCGTTTAGAGATTTCGCTGGCCGGGATGCTTCTGGAAGACAGAGCCCGGAAGATGATTCTAAAGATGGCTTATTTTCTTTAGATGATGATTCGCTCCCAGGAGAGAGTAGCTCCGGTCCGATTTTTGAAGGATTCACGCCAGCGAAAAACCAAGAAACTtactctaaaaaaaataaagtaacaaaACTAAGAGAATTAATAGACGATTCTCCTGATAGTCCAGCTGATGATGAACGTTCGTCTGAAGATGAACCTGATCTTAAAATAAAAGTTGAACCCCGAGAAGCAAGCTCCATCATGCCATCTTttgcaattataaaaattgaagaTATTACAAATGACGAGACCGAGGAACAGACTGAACCTGCTCAAGAAGTACAAGATGCTATTACACTTCTTAAACAATTACCACCGTTAGAATCTATACCCATGCCACCAAATACTCCGCCACCACTTAATAAACCGGATCCAGAAAGTAGGTCTACTTCTCCTGAACCCAATTTAGATGAGACCGACAGCAAATATACTGGTGAAGAATCTTCAAATGAACTAATTAACATTCTTAATATACCACTGCCGACTTCGGAGCCTACCGATACGTTAACACTAAAACTAGATAAAGAAAACCTGGACACACCTATTGCGGATGTTTTGCTAAAAATAGGTGAACCAGCATCAAGTCCAATCGACACAGAGGAAGACAAATCCGAACCTGACAGTCCTGCCCGCATCGATGTTCTACCTGAACCACCACCCGGTTTTCTATTGCAGTCTGAAGGTCCTAAAATTGCAGAAAAGCTGCTGAAAGCAATCAATAGTGCCAAACGCTTATCAATGTCTCCACCTCCTGCTGAGAACACGCCAGACACAACCAAAAAAGACAATTCACCTCTAAATGCGTTCAGTGAAAAAATTTCACCATTGCCAATATCTGAAAGTAAGTCTCCAGTTCCAAAGACAGAGCTGCTTGTACCTCCGAATAAAATTGAGCTAACGAAACGACTTAGTCCTGCAGAAATAAAAGAATCTGTCTTTGGGGAGCCATCAAATATTACCGATGCAAAGCGTGATCTGGTGGATATTAAAAAGGTAAAGCCAAAAGAAAGTTCGCCTCCGAGGCTTATGAGCCCTCTGAATATTTTAGAGAGACGAAAAAGCGTCGCCGACTTGCAACTAGCTCCGGGGAAAAATAATAAGGTTCTTAGTGACACGATACAAAAGCTGTCGAGTCAAATAAATCAATCAGTGACGGCCGCTAGCATTACTTTGCCGACTTATCAGCCTGAAGACAGAAGTGAATCTACGGACTCGGACGACTGTGACAACAGGTTGATCATAGACAAGTTGTCTGTGGAGGAGTGGGCCAGCGGTGGTAGCGGGCGGGAGGGTCGTCCGACTCGCGGGCCGCACGCGGGGAAGTCGCCGGGGGAGTGGAGTGCGGGGAAGACGTTACTCATGCTGGAGGATGCTTGCAAGAATGAACGGAAACATAGTGCTAGCGTGGTGGTCGCCGGCGGCAGCAGGGCGGTCGCGGTGGTCGCGGGCGAGGACGACAGCAACCTGTCGCTGCTGCTGTGTGAGGAGACCATCCCGGGGTCGCCTGCGCCGGATGTGGAGCCTCCGCCGCGCCATCACCTGCCCTTCGCCTGCGCGCCGCCGCACCAGGCACAATCTAAAGGTATAAACAAAGGAGACCATCCCGGGGTCGCCTGCGCCGGATGTGGAGCCTCCGCCGCGCCATCACCTGCCCTTCGCCTGCGCGCCGCCGCACCAGGCACAATCTAA
Protein Sequence
MILKFVDCIGAPNAIFYVVQKQGDDPPYLPVGTDVSAKYKGAFCEAKVKKVVRNIKCKVTLKAGGITTVNDDVIKGTLRVGSTVEIKQDPKKDPIEAVISKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFSTPVIAGRRGRRGRAQSDESEGEGSIRSMKADSAEREPHVGRVVLVESASGAERRRPHQPAFPALVVAPTAQIKVKEDYLVRSFKDGRYYTVPKKEAREFRKGSAPPEWCGVEAALQYLNNGVLPPHWDRDSLFNEPRNTSDDSSDDEPREEKDHFVAQLYKFMDDRGTPLNRNPTIANKDIDLYRLFRVVQKLGGYNRVTNQNQWKSIADKMGFHPVTTTITNLCKQAYKKFLHSFEDFYRKLGVTLVAHPRGARTPPAGRSLIRDRDKQLPPATGPATSTGSTTTTSSTPSTSNASTPTSTSTSTSLRSKDKDSDKSETEKSEKSEKEEKIEKPKEKPVSDEEDSADNQPLVPVSTAHKIEKEKDKEKDKSSTTSEEKVPVKSRSQSKTRSLPPIKTESHERRTPKRRPLSSKLGESFGGTTRASRRPHVSTDSDSSGRASRCGITKKMQSRRSQSANSASSGNTIASNGSKRPRKRKSTEPSSNEPTRARGCNVKAQVGDKLKVYYGPTQSESKVTYEAKVIEISREGMLRVHYTGWNTRYDEWIKPQRIALNVTQHEATNKKSGGGNRRARSKRSEESTARSDSDSDSDSDLDVKRLPKNPDDKSSIKTPPISKDAKSSDSSGSSKPRKRPSRTVSTTSSVSPAKKPRTTSNTTQHQHQGRDYDLNEIRSELKGLHSVKQELEEVIKTENQPNETMLSAVATTSVPAPEPVQPEKHAEDVYEFKEPEPFEFELHDEKKKRMHRIFDDISPTKYTSTLSKSLSEEISEEALRPRPPSFRSPSLSPFRDFAGRDASGRQSPEDDSKDGLFSLDDDSLPGESSSGPIFEGFTPAKNQETYSKKNKVTKLRELIDDSPDSPADDERSSEDEPDLKIKVEPREASSIMPSFAIIKIEDITNDETEEQTEPAQEVQDAITLLKQLPPLESIPMPPNTPPPLNKPDPESRSTSPEPNLDETDSKYTGEESSNELINILNIPLPTSEPTDTLTLKLDKENLDTPIADVLLKIGEPASSPIDTEEDKSEPDSPARIDVLPEPPPGFLLQSEGPKIAEKLLKAINSAKRLSMSPPPAENTPDTTKKDNSPLNAFSEKISPLPISESKSPVPKTELLVPPNKIELTKRLSPAEIKESVFGEPSNITDAKRDLVDIKKVKPKESSPPRLMSPLNILERRKSVADLQLAPGKNNKVLSDTIQKLSSQINQSVTAASITLPTYQPEDRSESTDSDDCDNRLIIDKLSVEEWASGGSGREGRPTRGPHAGKSPGEWSAGKTLLMLEDACKNERKHSASVVVAGGSRAVAVVAGEDDSNLSLLLCEETIPGSPAPDVEPPPRHHLPFACAPPHQAQSKGINKGDHPGVACAGCGASAAPSPALRLRAAAPGTI*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00874231;
90% Identity
iTF_00874231;
80% Identity
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