Lsin019771.1
Basic Information
- Insect
- Leptidea sinapis
- Gene Symbol
- ATFC
- Assembly
- GCA_905404315.1
- Location
- FR990173.1:6520843-6538216[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3 4.4e+03 -1.1 0.0 11 31 5 25 4 29 0.80 2 2 1.1e-10 2.2e-07 31.9 10.0 3 63 259 319 258 321 0.95
Sequence Information
- Coding Sequence
- ATGTGTTGTTACAAGAACAATGGGATGTGTCAGCTGTGTAGAGAGTTTCAGTTGTCGTGGTTGCAAAATCTACTCAAGAACATCTCCGGCGCTGCACCGAAGTTCGGGTCCGGTTACCATCTCGGCGATGACGTCAGCAACACCCTGTACCCGCCGTCGCCGGTCGAAATCAAGCCGAGCCAGGCCGAGCTCACCACCGATTTGTTGCAGCAGCTGGAGACCCAGTGCAAACAAGaaaatCTATTCTCCAACTGGTTGGAGGAGAAGGTGGATCTGCCTATGTTCGATAACATCTCCCACGTACCGGAACGTGTTGAAGTGCCTCAGACGACCTTGGCGCCAACCCTTCCTTACCCTTACCCGACGCAAACCGTGCCTCAACCGACCGAGGAGCTGCTGCGCGAGTTCGAGACCGTGTACGGCGTCGTGGAGCTGACCCACCTCACTCCTCCGCAGAGTCCGCCCGGGCCGGCCACCCAGCTGCTCCTCAGCTACGCCCAGCAGGCTCAGTGCGTGCCGTTGCCCACGCTGCCCCAAGCCCCCGCCGGCGACACCTGGTGCCCGGCCTCAGTACCGACCTCGTTGTCGGACTACGACTGCGACTCCCAGGCCCTCGAGGAGCTGGTGCGGCACCGCGCCGCGCAACTCGCTTCGCCCGAGCACTCCGGCGAGAGCGTTTCGGACTCGCCACCGTCGTCGCCGTCGTCGCCGCGTTCCACCGACGACGAATGGTCGTCGCCGACGCGCCCCAAACCCTACTCCCGCAACGTGGTCGACCGGCGCTCGCGCAAGAAAGAACAGAACAAGAACGCCGCGACGCGCTACCGACAGAAGAAGAAAGCCGAGATCGAGGTTCTTCTCAACGAGGAACAGTCTCTGAGGCAGCAGCACGTCGAGCTGGGAGACAAGTGCGCCGACCTTCAGCGCGAGATTCGGTACCTCAAGGGCCTCATGCGGGACCTGTTCAAGGCGAAGGGCCTCATAAAGTAA
- Protein Sequence
- MCCYKNNGMCQLCREFQLSWLQNLLKNISGAAPKFGSGYHLGDDVSNTLYPPSPVEIKPSQAELTTDLLQQLETQCKQENLFSNWLEEKVDLPMFDNISHVPERVEVPQTTLAPTLPYPYPTQTVPQPTEELLREFETVYGVVELTHLTPPQSPPGPATQLLLSYAQQAQCVPLPTLPQAPAGDTWCPASVPTSLSDYDCDSQALEELVRHRAAQLASPEHSGESVSDSPPSSPSSPRSTDDEWSSPTRPKPYSRNVVDRRSRKKEQNKNAATRYRQKKKAEIEVLLNEEQSLRQQHVELGDKCADLQREIRYLKGLMRDLFKAKGLIK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00875059; iTF_00874208;
- 90% Identity
- iTF_00875059; iTF_00874208;
- 80% Identity
- iTF_00875059;