Lsin004899.1
Basic Information
- Insect
- Leptidea sinapis
- Gene Symbol
- cnc
- Assembly
- GCA_905404315.1
- Location
- FR990155.1:23350071-23376710[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-14 4.1e-11 43.8 5.2 3 58 400 462 398 466 0.79
Sequence Information
- Coding Sequence
- ATGCGATCTTTGTCCGGGGAACAGCGCTGGCAGGACCTGGCGTCGTTGCTGACGATCCCGCCGCCCCCGGAGCAGTATCCGCATTACCATCATCAGCATCAGCATCAGCATCCGCATCCGCATTCCCATCCGCACAACATCAGTGCGCACGGTGCGGCGGGCTACGCAACAAACTACCACCCGTCCCTATCTGTACCTGAAAAACACGCGGAACCCTACGGTGCTGCAGCAGCGCCCCTGGAGAGCTCCTACAAGGTGGAGTCTGCTCATCATCCACAGCAACACGATGCCATATACTACCAGAACACGACATCGGAAGTGCCGCCGAATCAAGACGGCTTCCTGCAGTCGATTCTGAACGATGAGGATTTGCAGCTCATGGATATGGCAATGAACGAAGGCATGTATACCATGCGAATGCTGGAGGGTGCATCTTCCCATGTGCCCCAATCACAACCGCACATGCCCATGGCGACTGAAAGAGACTCAGCGTCAGACAGCGCAGTCTCCTCAATGGGATCGGAGAGAGTCCCATCTCTGTCTGATGGCGAATGGTGCGACGGCAGTGATTCTGCTCAAGAATACCACAGTTCCAAGTTCCGGCCTTACGAGGGCGCCTATCCTCGCGACAGAGGGGCCCACGCGCCGCAGAAGAAACACCACATGTTCGGCAAGAGATGCTTCCAGGAGCCACCTACTCCCATAGAGCCGGTCCTGCCCCGGCCTCAAGGCATCGTCAAATACGAATGCGAGCAACCCTACCATCATGAGCCGATGCATCTCAACaacaTTGACTACGGACGGGCTCAACTAGCCCCTCCCCATGTGACGTCACTCCAGCCCGCGTTAGATCTCAACACGGCACATGCCAGCCATTCCCTACTACAGGGTACAATTCCAAGTCCAAACGCGAATCGTTTCGGGTTCGTCGCGGGCGATAGAGTGAGACACAACCATACCTACAGCGCACCCTTACCGCCGGCAGATCAAAGACAACCAATAAGGGACAAACGagCGCGTCGACTTACGGAAAGCAGTAACCCGGACGGCGGGACGAATCACCACTTGACTAGGGACGAGAAAAGGGCTAAAGCACTCGGTATTCCCATGGAAGTGCACGACATTATCAATCTGCCCATGGACGAGTTTAACGAGAGACTGTCGAAACACGACTTGAGCGAGACCCAGCTGTCGCTCATAAGAGACATTCGGCGTAGAGGGAAGAATAAGGTCGCTGCGCAAAACTGCCGCAAACGCAAATTGGACCAGATCACATCCCTTGCGGACGAAGTACGTACAGTACGGGATCGCAAAATTCGTACGCAACGCGATCATTCGTCGCTGTTAGCTGAACGGCAGAGGCTGAAGGAACACTTTGCAGCACTCTATCGGCACGTATTTCAAAACCTCCGAGATCCTGAAGGCAGGCCGATGTCATCAGCGCAGTACAGTCTTCAACAAGCAGCGGACGGCAATGTGGTACTGGTGCCGAAGATGCCACAACATTCAGATCACGGCATGAATCGAACTACAGACGAGGATATGGAGAGGAAGAAGCATTATGAGTGA
- Protein Sequence
- MRSLSGEQRWQDLASLLTIPPPPEQYPHYHHQHQHQHPHPHSHPHNISAHGAAGYATNYHPSLSVPEKHAEPYGAAAAPLESSYKVESAHHPQQHDAIYYQNTTSEVPPNQDGFLQSILNDEDLQLMDMAMNEGMYTMRMLEGASSHVPQSQPHMPMATERDSASDSAVSSMGSERVPSLSDGEWCDGSDSAQEYHSSKFRPYEGAYPRDRGAHAPQKKHHMFGKRCFQEPPTPIEPVLPRPQGIVKYECEQPYHHEPMHLNNIDYGRAQLAPPHVTSLQPALDLNTAHASHSLLQGTIPSPNANRFGFVAGDRVRHNHTYSAPLPPADQRQPIRDKRARRLTESSNPDGGTNHHLTRDEKRAKALGIPMEVHDIINLPMDEFNERLSKHDLSETQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRKIRTQRDHSSLLAERQRLKEHFAALYRHVFQNLRDPEGRPMSSAQYSLQQAADGNVVLVPKMPQHSDHGMNRTTDEDMERKKHYE*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00875055;
- 90% Identity
- iTF_00875055;
- 80% Identity
- -