Basic Information

Gene Symbol
-
Assembly
GCA_949711725.1
Location
CATIXN010000014.1:20316055-20324094[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.34 5.1e+02 2.0 0.5 19 40 229 253 223 259 0.67
2 6 3.8 5.8e+03 -1.4 0.0 23 40 341 357 327 362 0.88
3 6 9.5 1.4e+04 -2.7 0.3 38 45 453 460 452 460 0.87
4 6 0.058 88 4.4 0.0 23 46 584 606 564 606 0.88
5 6 0.0025 3.8 8.8 0.0 4 43 656 704 653 707 0.75
6 6 0.00013 0.2 12.9 0.1 4 41 805 853 803 858 0.82

Sequence Information

Coding Sequence
ATGGATAATATAGATCCTATTGTTATGAAGTCAGAAATACAACCTAATGGTGATATTCTTCTATTTTACGTGGAAGATAATCAAGATGACACAGGAATTAGTGTGCTGGATGAGAACCAACAAGAGGATATACAAATGCTATCGGAGGCTAAGTATGTCATTGAAGATAGTGGAGAAAGTGAATCTGCTGATGAACTTGACTTAGCTCAAGCCAGTGACCAGTATGCTGCTGAACAATGGCTTGACGAAGAAATCAGACGACTTATTGTATTCTATCTTGACAATAAGGAAACATTTCAGAGTGGTACCACTAAAAAGAAACATTTATGGGCAGTTGCATGTAAGACAATGCTTTTAGGTAGACAACCTCTATCTTGTGAATATAAACTCAGGAAATTGAGGGAACAGTACTTTGAATCATGTGGAGAAAGGCAGAAaggaaatattttacaatggccaTTCTACAATTTGTGTCATCAagcatttaataatgaaaatcaagtAGACATATACTTTAATGATACCTCTGCTCAAAGGGCCACAAATAATATAGCTAATGAAATTGGGGAAATTCAAAGCTTCAAAATTGAAGAAACACATACAATAAATGCAAGTCCATTGCAGAGCTCAGATAATGCTAATGTAGAAAAAATGTTACAGACTTACATACAGTGGaggaatttttataaaaataataaaggtatTTGGGAGAAAATTGCAATGGAAATGGGAGCAAAGGATGTGGAGTATTGGCAAAAACGGttcttaaattataaacaatattatgcaTGCATGCTTTTGAAGCGTGATCAAAAAGGTCCAGATAGCATTACTTGGCCATATATGAagtattttgatgaaatatttgcAAATGATGTTgagtttgaaaataaatatacactCAATACTCAAGTTATTGAAAATGAACAATGGCATGATACAGAAAAAacattcttaataaaatatttctttgattGTTTTCATGAATTCCAAGACCCAACTATACCAGACGATTTTTTATGGCACGAAGTAGGACGTTTGTTAAATAAAGAACCAAATGTTTGTAAAGATACTTTTGAGGATTTGAAAAAGGATCATTACCGGAAGTTACTCCAAGATACATATGTTTTGGGTAATAGGGTGCCAATAGAGATTATTTTTGATTGTATAATATCAAAAGAGACTGAAATAGAACTGGAAAAACCATGGCAAGAATTGAACGATGAACTTCATATTGATAAACTTGATGTGCTAGTACAATTTATATCTGAACACCTAATTATGTTTAAAGATTCTGTTGGTTATTATGTGTGTTGGGCATTAGCtgcaaaaaaaatcaattgtgGCATTCCAGCTTGTAGAAAGCAATGGCAAAATTTAACtgcattatataaaaatatattaattgataaaaaagaaaatccAGACTTGGAAATTGACTGGCGATATATTGAtgcttttgataaaatatttgatcATGGCAATGATGTTAATCTACTGAATGGATATGACAgattgaaaaagaaaaaagaagagttTTCCGGCAAAGTTGGAGTGAAGAAAATTACAATAAAGGATGAGAGTGATGCAAAAACAGATGGTACTGATGATGAGGTATCATTTGATGAAGGAGGTTTCACTTTGCGCACGAAACGACGCCACGGTGAAGAGAAAGCTACAAAAATACtagactattatttaaaaaacaaagatAAGTTTAACTCTCCGCTTTACAAAAAACTTAATCTTTGGGAAGGTTTGGCGAATAAAATTGGTGTCACCCCTACTGAATGTGCTCACAGATTCCGGAACCTCAAACAAGTATATATAGCATATGTTCAGCGAGAAATGAGTAAACCAGAAATGCCAATTACATGGCCCTACTATGCACAATGCAAGAAAGTCTTCGGATACAGAGTGATAAAGGCCAAATATAAAAACAAGGACCTGTCTTACTGTCAGGATTGGACTGCCAGagaaataaaaaagctattgattTTTTATGGTGAAAACTGTGAcagtattgataataatatagatgAAATTAGTTTATGGGATAGTATTGCTGAAGAACTTGGCCAAACACCATCAAGTTGTAGTCGGAAGTTTTTCGAACTTAGAAAGTCATATAAGAAGTTGAAAACTATGAAAGCTAATAATCCTGAAACAAAGATTTCTTGGAAGTACTTTAGTATGATGGatgagatttatttaaaaaaggaaaaTCGGGCTAATATGATGATAGATGGTGATTTAGAGTGTAACTCTCTTGATATAATGGATGATGATGAGTACCAATGTATAATTGTGATCCCAGAAGGGGAAGATATAAGTAAAGCGCGTATCATATATcaacacaaaaatgacactcaGCAAATAGATGAACATGGTCTTAAAACAAACTCTGATATTTGGAATaaggaattaaaaaaacaactactCTCACAATaccttaattatattatggCTTGTGGAAATGAGAAAAATGATACTAAAGAGATGTGGGCAAGAATATCAAACAATATGAGGGGAAAGAGTCCTGACTCTTGTCGGAAAATGTATTTGTTGTTGAAGAAAAGACACAAAAATCTTTCTCACGAAGCAAAAAATGTAAAACCAtatgtagatatttttaaaaagattttgCTGCAAGAAccaaattttaaaaagaaataccaagaaaacAAAGTGTTCACAGATGTAGAATTAAATGATGAAAAAGTTGAAACAGCTTTAAGGTATTATTTAGAGAATATTGAAGAGTTTGTCAATACAAAATATGGCAAGAAAATTTTATGGAATGAATTAGCTCGGCTTACTTCAGAACCAATCAAGAAAGTTTTTAGGaaaattaactatttaaaacaatcatataaatgtattaatacaCCTTTTAAGGAGTTGTTAGATGAAATAACAGAAAAAGAAAATGATcttaaaaatagtattatagcTATTGAAAATTCTAGTCAAGATGATAAATCGTATATTTGGACTGATTTGGATACTGAGAGACTGTTAACTTGGTATTTGGCACATTTGGATAAGTTCAAAAATCCTAAACATGTGCGTAGTTTTTTGTGGATGGAAGTATCAGATATACTGAAGAAAAGTCCATTAGATTGTTCTAAGAAGATGTCTGAGATCCGATCTCAGTACAGAATAATGGTAAAAGAAACACCTGAAAAACTCCAGGAATGGAAATTCTATAATTTATGTCAACGAATTTATGGTATTGGAAAAAAGATCATGGAAACAAATGATTGA
Protein Sequence
MDNIDPIVMKSEIQPNGDILLFYVEDNQDDTGISVLDENQQEDIQMLSEAKYVIEDSGESESADELDLAQASDQYAAEQWLDEEIRRLIVFYLDNKETFQSGTTKKKHLWAVACKTMLLGRQPLSCEYKLRKLREQYFESCGERQKGNILQWPFYNLCHQAFNNENQVDIYFNDTSAQRATNNIANEIGEIQSFKIEETHTINASPLQSSDNANVEKMLQTYIQWRNFYKNNKGIWEKIAMEMGAKDVEYWQKRFLNYKQYYACMLLKRDQKGPDSITWPYMKYFDEIFANDVEFENKYTLNTQVIENEQWHDTEKTFLIKYFFDCFHEFQDPTIPDDFLWHEVGRLLNKEPNVCKDTFEDLKKDHYRKLLQDTYVLGNRVPIEIIFDCIISKETEIELEKPWQELNDELHIDKLDVLVQFISEHLIMFKDSVGYYVCWALAAKKINCGIPACRKQWQNLTALYKNILIDKKENPDLEIDWRYIDAFDKIFDHGNDVNLLNGYDRLKKKKEEFSGKVGVKKITIKDESDAKTDGTDDEVSFDEGGFTLRTKRRHGEEKATKILDYYLKNKDKFNSPLYKKLNLWEGLANKIGVTPTECAHRFRNLKQVYIAYVQREMSKPEMPITWPYYAQCKKVFGYRVIKAKYKNKDLSYCQDWTAREIKKLLIFYGENCDSIDNNIDEISLWDSIAEELGQTPSSCSRKFFELRKSYKKLKTMKANNPETKISWKYFSMMDEIYLKKENRANMMIDGDLECNSLDIMDDDEYQCIIVIPEGEDISKARIIYQHKNDTQQIDEHGLKTNSDIWNKELKKQLLSQYLNYIMACGNEKNDTKEMWARISNNMRGKSPDSCRKMYLLLKKRHKNLSHEAKNVKPYVDIFKKILLQEPNFKKKYQENKVFTDVELNDEKVETALRYYLENIEEFVNTKYGKKILWNELARLTSEPIKKVFRKINYLKQSYKCINTPFKELLDEITEKENDLKNSIIAIENSSQDDKSYIWTDLDTERLLTWYLAHLDKFKNPKHVRSFLWMEVSDILKKSPLDCSKKMSEIRSQYRIMVKETPEKLQEWKFYNLCQRIYGIGKKIMETND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-