Basic Information

Gene Symbol
Arid2
Assembly
GCA_949711725.1
Location
CATIXN010000004.1:29125923-29170659[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-21 5.5e-18 66.2 0.1 2 89 17 101 16 101 0.94

Sequence Information

Coding Sequence
ATGGCAAAATCTCAAATAAATACCAGAACTAGAGAACTTATATTAGATAAGGATACATttcttaaagaattaaaacagtttaatGAGAGTAAAAGTATACCTTACAAAATACCTGTTGTAAACGGGgttgaaattgatttatatcttttgtattCCTTGGTGCAACAAAGGGGTGGCCTAAACAAGgtaAATCAAACTGATACATGGGAATCATTTCTGAGACCACTCAAATTGCCATATCCATGTGTCAATGGATCCACCctgttaagaaaaatatatggaATGTACTTAGAAAAatATGAAAGAGCTAAGGGTCCTCCAGGAAgagatgatgataatgatatggATGAGGATCCCAGAAGAAGCAGAGGACACATACCAAGGGTTACTTTCACTGGGGGAACATATATTTCAGcaTCGGGGGAACAGCTTAAAACACATGTGCCACGATTTCCAGGGCCTTCAGAGAGGCTAACCTTATCACTACTGTCTCCAATGCCAAATGAACAAGACTTTGCAGTTAATGTATGTACAGTACTAGCAGCAGATCATTCTAACAGACTGCCATTGAGTACATCACCACATATATTAGATTTCATGCTGGCACATGCAGGAGTTTATAATCATTCAAGTCTTCGAGATACAATTGGTAGGTCAATTTATGAAGCCAGGGGTCGTTATCCTCATGATTTCTGGCAGTTACGAGCAGGCGGGGGTGGTGCTAAGGAGTTAGCTGATGAAACAAAGTTCATGCAGCCTGGAATTGAACAGCCAGAATTAATGGTTCAAGCTTTGGTAGCACAGAACACTCTCACTGACTGTTTGGTTAATGGTGGGGAGGATGAGGAAGATCtggaaaaaataatgaatgaagtagctGAAACCCAGCAACCAGAACCGGAGGCTGGAGAGGATTGGGTAACAGAACCATCAGATGAGGATGTCCTATTTGCCCCGGAGCTACCTGGAGGAGCAAGTTGTGTTTACACACAGAGAGTACTTCAGATCGCTTCAATAGTTAGATCTCTATCATTCCATGATGAGAATATACAATATCTGGCACGGAATACTACACTTGTTCGgtttttattgCTGTGTGCAAATTGCTGGGTGGGTGCTCTTCGACAGAGTGGCTTGGATACTCTGGGAAATATAGCAACAGAGCTTATTATCaagGAGCCGTCAACCTGTCTCATATCCCGGCACGTGCTGTCCACGATCCAGACGGCACTATCTTCGCCGGACCGAGCCAGGATATTGGCGGCACTGGAGCTACTTAATAAGTTGTCTCAAAACGAGGCGAATGAAGATGCTCTGCTTAAATCATTGGAGTCCAAAGTGTACAGCGACGTGTGCTCGCTGCTCACTCTGCGCGACATCATGGCGCTGGTGTGCTCGCTGGAGTGCGTGTACTCGCTGACGTCACTGGGCGAGGCCGCGTGCGAGGCCGTGGCGCGAGTGTCGGGTGTGCTGCACACGCTCGTGTCGCTGGTCACTGTCGAGgctCAAAGCTACGGTCCCAGAGCGTGTATATTGATGCGTGTCGTAGAGACAGTGAGCGGACCTGCAGCCGCCGCTGACAGAGAGGCCGATAAAGAAAAGGCACATCAACTAACTCAGcAACAACTAATCCAAACAAAACCGGAAACGTCACAAGTGACGTCAGCAACTCCTAACGTAGTCACTACGCACGCGGCCGCGGCCGTGGCCGTAACGACGACCGCGCCCGTGCCGCCATTATCATCAATACAACAATCGCATATTCATCAGAGAACTGTCCAGGAGAACGAACACTTCGTGCAAGCGTGGCTCCGCTCGTCGTACGAGCCGCTGCCGGGCGCCGACACCAGTTGGTGCGACGCGGCCGACCTGTACCGCGCCTACGTGGCCGTCTGCTCCCAGCTGGGCCGCAAGGGAGTCGTGGCGCCCGCGCACTTGCCGCGGCTGGTGAGGTCAATATTTGGAGGCACAGTGGGTCCCAATACAGTGAAGTCCAGTACTGGTGAGACCCAGCAAGTGTACATCGGGATCAAGGCTAAGAACCAGCCCCCGAAGTCTGCCCCACCCGCTGGACCATCTTCACCAATCCTTAAAGCCCAGTTGACGAATAAAGTACCAGAAGTGAAGCCCGTTACACCTCCACAGGCGCAGCCAAGCTCTCACCCGCATTTGTCCCAAGCCCTAGAGACGAACCAGTCGAACACTACCTTAATCAAACATTTGCTAGCGCACAAAGTAAGCCCCGCCGTACAGACGCAAgttGCCCAGAGACAACAAAGAGTTGGAACTCCTGGCACTGTCGTTGTTCAAACCACTACAAGCTCGggaATGGACGTAGATCCGGAGGCTCTTATAAAGTGTACGACTATAACTCCAGGAGGCATTGCTACCACTACCGAAAAGATCGCGATACCGGCTGAGGAAATATTGGTGCCAAAAGAGGAGCCAGTACACATTCAAATTGATGAACAGGCGCAGCTGACTATTAAGAGTGCACAGAACAAAATGCTTGCTGATTTACTTGAGAAAAAATCAAACCCGCCGGTGCAAGTTGTGCAAATGGCAACCCCGACAATACAGATAACTGAAACTGGCCAAATTGTCACTGTCAAATCTGACAACCCCGTTCTACAGATTAATGCGGACAACGCGACGTCGAATTCAGCGCCATATTACCAAATAAGGAACGAACAAGGACAAGTGATACAGATTAAGAGTGAATCGGGACAGATTATTCAACTAAAAAGCGACCAGTTGCAAGGTTTTGTGCAGTATAAGAATGATCAAGGACATATCGTACAGACTAAGAACGAACAACAGGTTATACAGCAACCACAGAGTATACAAGCACAGAGTACACAGGCCCATAATGTACAACCGTTCATTGTTCAGCCGCAGAACACTCAATCACAGATTCAAAGTGTAATACAGAGTACAAAGAAAGAGAGAGAACATAGAGACACGGTGGCCGTAGACCATTCGTATACCGAACCCCCAAATAAGAAGTCAAAAGTAGAAGACAAATCTGAGaaTGGTTCACCTCAAGAAAGTGTATCGAAAACGGCCGCTAACTTATATGCAGCGCTGGCGGCGTCGGCTCTTGAAGATGAGGACGATTTGTTACCGCCGCCCAAACAAGAGAGTATGGAGGTGATACAGCAGCCGGTGATGATGCCGGGCGCTGACAACTCGCCTGTCATCATACAGGAGCCCATACTGCAgGTCCAACAACCAGCAATTCAAGTGCAACAGTCGGCTCTAGTACAAGGATCTACATTACAaATGCAGCAGCCGATGTTACAAGTGCAGCCAATGGACGTACAGAATATTATCGCTTCGCAAGCCGGCCAGTTAATTCTACAGGAGAAGACAGTTGTGTCGCAAGCCCAGTATGTTCAACAACCGATGCAAATTATTGCTGCGCCAAGTAACTCCCAGGGTTTAAGTTATATCACTCAGAATATACCAGGAAACATGATGCAGAAGACCATCATCATTGTTCAAGGGCCCACGGGTGGTGGACCACTCACATTGACTGTGAACAACCCGGGAGGTTTGGACGAGGCCACATTAAACAGTGTTATCGCCCAGGCCACCGAGGCACTTACGCAACAGCAAATAATTCAGAATTCTGGTGTGATACAATCGGCACAAAGGGTGATAGTCAGTCAGCCTACACTGGTCAGCACTTCACAATCCATCGCCGTCGTCAAAACGGCACTAGCCCAGAACGCTCCCCAAATAACTCCTAGCCAGCAACCAATGATAACCACACAACCTCAGCCACATAAAGCACAAATTATGAATCAACCACAAACACAACAGATTTTGGTCACTCAGAAACAACCGCCGGCACTTGTGAGCACTTCGTCTACAAACCAAATGGTTGGCAACCAACATATAATTCAAAGCAACCAGCAGCTAATGCAGGGCAACCAGCAGATTATAGCAGTGTCTAGTAATCAACAGATAATAATGAACTCGTCTTTAAAGTCGGGTGTGCACAGGATCGTGCAACAGACACAGAGGAACCAGGTCGCTACGGTCTCGACCAGCAGTTCAATGCCAACTTTGGTTGAGAGTAAAACGCCGCAGACAACAGCGaaaacaCAACCGCCAATTATCAGACAAGTGATCCGACAACCGGTGATGGTTGGCAACACCAAAATAGGCGAAAAGGAGACAATTGTCTCACAAACAATTACCGAACAAAAGCCGTCCCCGAGGCTCCCGGGCTCTCCACCGCCGTTGGCACCTGCCACTCCAGCTCAAGAGGAAACGCCCTGGATATGTCATTGGAAGGGATGTGGAAAAACGTTCTCGAACGCGTCGGGCGTGTTCAGCCACGCGGCGCGCTGTCACTGCCCGGGCGCGGCGGGAGGCGAGGCGCCGTGTCTGTGGACGGACTGTGACCGCGTGCCACGCAAGACGTTCGCGCTGCTCAACCATCTCAACGACAAACACTGCACGCCGCAAGCATTAAAGGCGATTTTCAACTCTCGTCGACATGTTTCTACTGAGCCAGATGCCAGCAAACCTGCGTCTGTGGCGTACCCGCCCAACGCGGCTCTGGCGGCCCTTAACAAGCACGCCAACGAAACATTCAATCCGAGGGAGTTGATGGATGAAAACGAAGGACCTGTGACGAAAAGCATTCGATTGACAGCGGCATTGATACTGAGGAATATTGTCATATATTCAAATACAGGCAGAAGAATTATGCGACAGTACGAGGCCCATTTAGCAGCCATAGCACTCAGCAATGTAGAAGCTTCCAGAACGATCGCGCAAGTCCTGTACGACATGAATAATATTGGCGAGTCGACGTATGCGAGTAGACCGTATGACTGA
Protein Sequence
MAKSQINTRTRELILDKDTFLKELKQFNESKSIPYKIPVVNGVEIDLYLLYSLVQQRGGLNKVNQTDTWESFLRPLKLPYPCVNGSTLLRKIYGMYLEKYERAKGPPGRDDDNDMDEDPRRSRGHIPRVTFTGGTYISASGEQLKTHVPRFPGPSERLTLSLLSPMPNEQDFAVNVCTVLAADHSNRLPLSTSPHILDFMLAHAGVYNHSSLRDTIGRSIYEARGRYPHDFWQLRAGGGGAKELADETKFMQPGIEQPELMVQALVAQNTLTDCLVNGGEDEEDLEKIMNEVAETQQPEPEAGEDWVTEPSDEDVLFAPELPGGASCVYTQRVLQIASIVRSLSFHDENIQYLARNTTLVRFLLLCANCWVGALRQSGLDTLGNIATELIIKEPSTCLISRHVLSTIQTALSSPDRARILAALELLNKLSQNEANEDALLKSLESKVYSDVCSLLTLRDIMALVCSLECVYSLTSLGEAACEAVARVSGVLHTLVSLVTVEAQSYGPRACILMRVVETVSGPAAAADREADKEKAHQLTQQQLIQTKPETSQVTSATPNVVTTHAAAAVAVTTTAPVPPLSSIQQSHIHQRTVQENEHFVQAWLRSSYEPLPGADTSWCDAADLYRAYVAVCSQLGRKGVVAPAHLPRLVRSIFGGTVGPNTVKSSTGETQQVYIGIKAKNQPPKSAPPAGPSSPILKAQLTNKVPEVKPVTPPQAQPSSHPHLSQALETNQSNTTLIKHLLAHKVSPAVQTQVAQRQQRVGTPGTVVVQTTTSSGMDVDPEALIKCTTITPGGIATTTEKIAIPAEEILVPKEEPVHIQIDEQAQLTIKSAQNKMLADLLEKKSNPPVQVVQMATPTIQITETGQIVTVKSDNPVLQINADNATSNSAPYYQIRNEQGQVIQIKSESGQIIQLKSDQLQGFVQYKNDQGHIVQTKNEQQVIQQPQSIQAQSTQAHNVQPFIVQPQNTQSQIQSVIQSTKKEREHRDTVAVDHSYTEPPNKKSKVEDKSENGSPQESVSKTAANLYAALAASALEDEDDLLPPPKQESMEVIQQPVMMPGADNSPVIIQEPILQVQQPAIQVQQSALVQGSTLQMQQPMLQVQPMDVQNIIASQAGQLILQEKTVVSQAQYVQQPMQIIAAPSNSQGLSYITQNIPGNMMQKTIIIVQGPTGGGPLTLTVNNPGGLDEATLNSVIAQATEALTQQQIIQNSGVIQSAQRVIVSQPTLVSTSQSIAVVKTALAQNAPQITPSQQPMITTQPQPHKAQIMNQPQTQQILVTQKQPPALVSTSSTNQMVGNQHIIQSNQQLMQGNQQIIAVSSNQQIIMNSSLKSGVHRIVQQTQRNQVATVSTSSSMPTLVESKTPQTTAKTQPPIIRQVIRQPVMVGNTKIGEKETIVSQTITEQKPSPRLPGSPPPLAPATPAQEETPWICHWKGCGKTFSNASGVFSHAARCHCPGAAGGEAPCLWTDCDRVPRKTFALLNHLNDKHCTPQALKAIFNSRRHVSTEPDASKPASVAYPPNAALAALNKHANETFNPRELMDENEGPVTKSIRLTAALILRNIVIYSNTGRRIMRQYEAHLAAIALSNVEASRTIAQVLYDMNNIGESTYASRPYD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00875935;
90% Identity
iTF_00874234;
80% Identity
-