Basic Information

Insect: Leptidea juvernica
Gene Symbol: RREB1
Assembly: GCA_949711685.1
Location: CATIXL010000011.1:8897690-8904385[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.019 2.6 9.9 0.1 1 23 262 284 262 284 0.97

2 10 0.001 0.14 13.9 0.4 1 23 293 315 293 315 0.99

3 10 0.00062 0.087 14.6 2.0 1 23 321 344 321 344 0.97

4 10 0.0025 0.35 12.7 1.6 1 23 690 713 690 713 0.96

5 10 0.00021 0.029 16.1 1.3 2 23 905 926 904 926 0.97

6 10 0.021 3 9.7 5.3 1 23 932 955 932 955 0.97

7 10 0.43 61 5.6 0.8 1 23 984 1008 984 1008 0.91

8 10 1.9 2.6e+02 3.6 0.2 1 19 1028 1046 1028 1051 0.73

9 10 0.0015 0.22 13.3 0.2 2 23 1091 1112 1090 1112 0.96

10 10 0.024 3.3 9.6 5.3 1 23 1118 1140 1118 1140 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.019	2.6	9.9	0.1	1	23	262	284	262	284	0.97
2	10	0.001	0.14	13.9	0.4	1	23	293	315	293	315	0.99
3	10	0.00062	0.087	14.6	2.0	1	23	321	344	321	344	0.97
4	10	0.0025	0.35	12.7	1.6	1	23	690	713	690	713	0.96
5	10	0.00021	0.029	16.1	1.3	2	23	905	926	904	926	0.97
6	10	0.021	3	9.7	5.3	1	23	932	955	932	955	0.97
7	10	0.43	61	5.6	0.8	1	23	984	1008	984	1008	0.91
8	10	1.9	2.6e+02	3.6	0.2	1	19	1028	1046	1028	1051	0.73
9	10	0.0015	0.22	13.3	0.2	2	23	1091	1112	1090	1112	0.96
10	10	0.024	3.3	9.6	5.3	1	23	1118	1140	1118	1140	0.97

Sequence Information

Coding Sequence: ATGAAGATAGAAACACGGGTGCAGAGGACTACGAGTATAGACAGTGATAATCGCTCGGATAGgagtgatgatgatgactgCAGGCGTGCACGGAAGCGTGCTGCTTCATCATCACCTTCACCGATGCCCTTGGACAAAAGAATAGCGCGATTCGAAAGCTCAAAGTGTCTCCAGAAATTCGATTCCGCAAATGCATTTGACGTTCATAGGTTTACAGCACACGCAGAAGATACCAAAGCAAATTATGAAGATCGTACTTACGACTTTTCGCATAAAAAAttctcagaaataagaaatatcaTCGAACGTAACCCGCAAAATTTGACTGTGCATGATCAGATATATAGATGTGAATTTTGTTCAAGAGACTTCCCCTGCGTGCAGGTGTTAGAACTTCACAGGAAAACATGTTCGTCTTCGATCAATTCCAGCCCAGAAAGGGATCGACGCGAAGACTTTTTTGCCAAATTAGATTTGAGGAACAGGTCATTTGGCATTCCTGGGACGTTAACCCCTCCAATGGAAAGATTCACCCCTAAATTTGATGAAACACACATCGGCAATGGTATCAGACATATCGATGCAGCTAGAGATTTGGCAGATATTCAATCAATTCTTAATGTCACATCAGCTGGAAGCCTTTTAGAAAGACTAACTGGTACCAGAGTCTCCCTTGAAAACTCAGTTCTTACTCCACCTGATACTATTAGTAAAGATCGCGAACAAGAAGAAACTCAAGATAATTTTGCTGCTGAATTCAGACGCATGAAATTGCGTGGAGAGTTCCCGTGTAGGTTGTGTCCCGCTAAATTCCCAAATTTAAGAGCTTTGAAAGGACATAACAGAGTACATTTAAGTGGCACAGGCCCAGGACCTTATCAATGTAATATGTGCCCGCATGCATCGCTTGACAAAGCAGCATTAGTTCGTCATATGCGAACACATAACGGAGACCGACCATACGAATGCGCTGTTTGCAACTATGCCTTTACAACTAAAGCAAATTGTGAAAGACACTTGAGAAATCGTCATGCCAAAGTTACAAGGGAGGATGTTAAGCGATCTATTATATATCACCCATCTGAAGATCCTAACAACGACGAGGTTAATTCAAAACTTGCAAGAGAGGAAGTTAAAAGATCTTTGGCTTTCCACACTCCAGAGGTTGAAAGACGCAACGAAAATTCTGGTCGAGAAACTCCGCTCACTCATTATGCACCTCCGTTTATTGCCGAGAGACATCCGGTAACTTCATTGGCTAAGGCTTTGCCAGACACGCCTACATTGACGCCACGAGAAACTGATCAAACAATACCAAGAATCAAAGTTAAAGGTATTGGACAGCTGACACAAATACCAGAATTCAGGCCACCGGATATCACGTATAAGACAAATGACGTTCAACCCGATTCGTACAATGATGATGCACCTGTGGATCTGAGTACAAGTGATAATAACAGTTGCGATGTACTTGATCTGAGTAAGAAAAAGCGAGATGTTGAAGAAGAGGAACCGAAAGCTCCTTCCCAACCTATTTTTGATGCCTCCGCTGCAGCTGCCGCTGCTGCTTTTGAAAAGACAAGATTTCTACTTGCCCAACAAAGACTCTTCGAATCATCATTACCAAAAATAGACCCTGCCTATTATGCTACACAGCTTTCTCAACTCTACGCCGGTGCAGTACCTGGTTTGCCAGGACTGCCGATACCACCATCATTTCCTATTAATCCTTATTTTCTACAATCTTCTTTTTTCCCCCACCCTACTGATTCACAAGAACTTGCCGAAATAAAACAACGTATCCAAAAAGAAATTATTCGGGGTTTGAGCATGTCCGGGGGTAGGTTAGTTTCGCCTGATCAAGAAATACAGCCTAAGCAAGAGCCAGAAGACGAAGATCAGAAACCATTACAAGTGACAACGACTCCTACACCGCCGCCGCTTCCAGAATCTCCACGTCCTATACCAACAAATGCTGCACCGCAAAACGATTCTGTAAAAATGGTGATTAAAAACGGAATACTTATGCCAAAGCAAAAGCAAAGAAGATATCGTACTGAACGCCCTTTCTCTTGCTCCCAATGCTCCGCACGTTTTACTTTACGTTCAAACATGGAAAGACATGTTAAACAACAGCATCCACAACACTGGAGTGTCAGGAGACCAGCCCCTAGAGCGCCACCGCCATATCCTGGCTCAGAAAATCTCTCCGACCGGGTTAAATATGCTTTATTAGCTCGCCACCTGGAACGACCATCACAAATAGATCGGTCTCCTGTTAGAAGAGATTCAGATGAAGTCGCTGACAATGAAGAAGATGAAGAGGATACTTTGGTGATAGATGAAGAAACTGAAGATAATAAGTCTGATGAACATACTGCTGCACATCGAGCCGCGGCTGAAATATTGATGGCTACACGCCATCAAGAGCTCAGCAAAGATTTCGATTTGAAAATTGCTGGAAGTCTTATCAATAAACCTATACCTATTCCTATAGAAAAAAATGAAACTGGGACAGATCCTATACCTTTAAACAAAGACCTTCAATCTGTTGTTCCAACTCGCAGTGACGAGGAAGAAGACGAAGAAGGACTTGTAGCTTCTACTAGTGAAGGAAATATCTCGGGCAGCGACGaaaataaGTCCGAGTCAGATACTGGCACACAACCTCCAAAAAAGAAGTCTGCATACAGCCTAGCACCAAATCGTGTGTCGTGTCCATACTGCCACCGGAAATTCCCCTGGTCATCGTCTCTTCGCCGCCACGTCCTGACCCACACGGGCCAGAAACCTTTCAAATGCCCACACTGTCCACTTCTTTTCACGACGAAATcaaattgcgatcgtcacctccTGAGGAAGCATGGCGGTTCAGCTAAAGCGATTCTAACCGAACCCCTCCCGGATGCTCCTCCAACTTCCACGGATCGAGCGGTCCCCGAGCGACCTTATAAATGCTCATCATGTCCCACAAGCACATTTTCATCTATAGAAACACTAAAGAAGCACGTTGCCTCCCGCCATTCCAATTCGCAACCACCGTCCCCGAATCCTGAAGAAGAAACAGATTCTAGTTTGGTCTTCAAATGCCATCTTTGTGAAGCGTCGTTTGGTGAAAGAAATGGTGCTTTGGGACATTTAGCTTCGAGCCATCCGACGGAATATGAACAGTTGGTGACCAAGGGTGCCTTAGACGCTGCTAGTGACAAGAGCGAAAGTGCTGACGACGACGAAAGAGGAAAATTCCCTGACCATGCTAATAGAAAGGTGGTATGCGCTTTCTGCGTACGTCGCTTCTGGTCGGCAGAAGACCTTCGTCGCCACATGCGTACACACTCCGGGGAACGCCCGTTTGCCTGCGACCTGTGTCGCCGCCGCTTCACTCTGAAGCACAGCATGCTGCGACACCGCAAGAAGCACCGAGAGGAAGCCACCGATGACGAGGAAACAACACCGCCAAGCACCCCTAATGATGCTGTCAACGGTTTCCGTTACCATGACGACGACGGTTCTGGCAACGAGATCCCCAGTAACGTTAACAACAACAACTCTCCACCCTCACTCCCCTACGAGAAGAAACTCCAGCTCAACGTGACGTCACGCAAGTACTCGTCCGAGGTTGAAAACGAAGCAGAACAGGGCGGCGATTTGATCGGAAAACTACTGGGCATCCCCGACAagacaataattaacaaacttcTCTCTTCAGCCGACGAAGCTGCAAAATTCCTTGGAGTGAACAAATGA
Protein Sequence: MKIETRVQRTTSIDSDNRSDRSDDDDCRRARKRAASSSPSPMPLDKRIARFESSKCLQKFDSANAFDVHRFTAHAEDTKANYEDRTYDFSHKKFSEIRNIIERNPQNLTVHDQIYRCEFCSRDFPCVQVLELHRKTCSSSINSSPERDRREDFFAKLDLRNRSFGIPGTLTPPMERFTPKFDETHIGNGIRHIDAARDLADIQSILNVTSAGSLLERLTGTRVSLENSVLTPPDTISKDREQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLAREEVKRSLAFHTPEVERRNENSGRETPLTHYAPPFIAERHPVTSLAKALPDTPTLTPRETDQTIPRIKVKGIGQLTQIPEFRPPDITYKTNDVQPDSYNDDAPVDLSTSDNNSCDVLDLSKKKRDVEEEEPKAPSQPIFDASAAAAAAAFEKTRFLLAQQRLFESSLPKIDPAYYATQLSQLYAGAVPGLPGLPIPPSFPINPYFLQSSFFPHPTDSQELAEIKQRIQKEIIRGLSMSGGRLVSPDQEIQPKQEPEDEDQKPLQVTTTPTPPPLPESPRPIPTNAAPQNDSVKMVIKNGILMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPAPRAPPPYPGSENLSDRVKYALLARHLERPSQIDRSPVRRDSDEVADNEEDEEDTLVIDEETEDNKSDEHTAAHRAAAEILMATRHQELSKDFDLKIAGSLINKPIPIPIEKNETGTDPIPLNKDLQSVVPTRSDEEEDEEGLVASTSEGNISGSDENKSESDTGTQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSAKAILTEPLPDAPPTSTDRAVPERPYKCSSCPTSTFSSIETLKKHVASRHSNSQPPSPNPEEETDSSLVFKCHLCEASFGERNGALGHLASSHPTEYEQLVTKGALDAASDKSESADDDERGKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREEATDDEETTPPSTPNDAVNGFRYHDDDGSGNEIPSNVNNNNSPPSLPYEKKLQLNVTSRKYSSEVENEAEQGGDLIGKLLGIPDKTIINKLLSSADEAAKFLGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01202808;
90% Identity: iTF_00876588;
80% Identity: -