Lven014024.1
Basic Information
- Insect
- Lepidotrigona ventralis
- Gene Symbol
- NCOR1
- Assembly
- GCA_002806875.1
- Location
- NIPQ01091319.1:16651-30534[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-08 3.6e-05 24.3 0.0 3 43 776 816 775 819 0.96
Sequence Information
- Coding Sequence
- ATGGAGACAGTGAGCAAGCAAGTCCAAGTAGTGAGCGGACTGGGGGTGGGAGGTCCGGTGGGCCCTGTGGGTCCAGTGGGGGCAGATTTgcatcaccatcatcatccTCACTCCCACTCTCATCCTCCACACCCACACGCCCACCCCCACGGTCATCCTCACGGGCCCCATGGCCACTCACTGGTCGGCGTAACGTCGACCCCTGGCAGGGGTCAGACACAACCACCAGTCTCGCATAACCAGCATTTACCTGCGAGATCTACTCCGGTAAAATTGaacgtaaatttgaaaatatcctTACATAAAGGTATACTTAGTTTAGAAGATTGTTGGGTAATTTGGTATCATTgGCCGGCGCAGAATTATGTGAACATCAAGAGCAGCAGCCCTGTGTCTCCAAGAACGATAGGAGCAGGAGTGACGTACGTGCAGGGTGGTGCGGCTGCATCttcagcagcagcagcagcagcagcagcagcagcgggGACAGCTGGAGGTGGAAGTGGCGGAGGTCCTTCAATCGGAGGAGGAGGCGGTAGCGGTAGCGGCGGAGGTGGCGTTGGTGTTAACAACACCGGTGGCGCGAACAGCGGAGCAGGAGTCGTTGGGGCTGGAGCTGGTGCTGGTTCCGTTGGGAACGTAGTACCAGCCGGAAATGGTAACAGCAACGGTACCAGTAACAGTGTCGGTGCGGGGAGCAATAGTGGCGGGAACAGCGGTACAGTGGGTGGTGCACCAGGAGGTTACGTCGCTGTGCCCATGGCTGGCAGCCTGCGATATATTCATCCGTATCAGTCGACGCCAACGTCGGCGTCGGTGCCGGCTGTAGCGACGATGGTCACCTCGGCCTCGTCGGCACCGACTCCAGTACCAGTTCCAGCGCCCGCAGCTGCACCTGCCAATCCACCTACAGTCAGTCAAACGCCACCACCATCGCTCTCGGGAACTGTTTATGCCGCGAGAGATGCATATCGCAGCGCCACCACGAATGTGAACGAGAGGATCGCCATCAGCGTGAGCAGCAGTCCTCTGTCGCAGATAGGAGTCGGTGTCGGAGTAGTTACAGCCGAATATGCGGCGAATAGCGGTATAGGTAGTGGCATGGCTGGTGGAAGAGGGGATAGACCGAGGATATCTCTTCTGCCACCTGCTTCGGTAACACCGACACCTTCACCGACAGCACCAGATTACCAGCACGTATCCAGTGCAAGAAATTCACGAATAGCCCTGATGCCCGTCCAGCCGGATCAGTATTGTAATCGTACGGCCGTTGAAATGGCCAATCTACAGGAGGCGCCACCTTTCAAGAAGATACGCCTCAGCCAACCAACCCAGATTCAATTGCAGTCCCAATCGCAATCTCGCTGTCATAGTTTGTCACCCGCTGATCCGTGCGTTAAGCAGGAACATGTGGTGCAGTTGCAGCAACCGCTTAGGATAGACACTAGGGGGCAGCCGACAACAGAAGCGTATACGCCGCAAACTGAAGCAATATCACCTACGCTTCCGGAACCAAACACGCAAGAAGATGCGCAGTTCAGAAGCACCAAGGATGATCTTCTGCAACAAATCTCCAAGGTGGACAgagaaattgcaaaaagaGAGTCTCAGATAAATAAGCTTCGGAAAAAGTTAAAGGAATTAGAGGAGACGGCTAATAAACCTCTAGAAGCTAGCGGTCTCAAACGACAAGTTGAGGAACAATCTCAGCAACCAAAGCATCAATCTCTGGCACAAAAAATTTATGCTGAAAATAGGAGAAAGGCAGAAGAAGCTCATAGACTTCTAGAGAGGCTGGGTCCTAAAGTGGAACTTCCTTTGTACAATCAGCCATCAGATACAAGTGTGTATCAAGAAAATCGAACAAAACATCAAACGTGTATGAGAGCAAGGCTTATAGCGAGGCTTCGACGAGAACACGCTGAACGCGCATCCCTTCATCGACAGCAGTCGCAAACGTACGCTATTTTGGTACAGGAATGGCATCGTAAAGTAGAGCGATTGGAAGCGACGCAGAAAAGGAAGTCGAAAGAAGCGAAGAATCGCGAATTCTTCGAGAAAGTGTTTCCAGAATTGCGGAAACAAAGGGAAGACAAAGAGCGTTTTAATAGAGTCGGTGCTCGTATCAAGAGTGAAGCTGATTTAGAGGAAATTATGGACGGCCTTCAAGAACAAGAGATGGAAGATAAAAAGATGCGTTCGTATGCAGTAATACCTCCATTATTATTGGATACAAAGCAAAGACGAATCGCATTTCAGAATCGAAATGGTCTTCTTCAGCCTGAAGAATTAGAAGCGCTTCACAGTGAACGAAAGTTAATCAATGTATGGAGTTCTGTGGAGCATGAattgtttaaagaaaaatatttacaacatcCTAAAAACTTTGGAACGATAGCTCAATCTTTAGAACATAAGTCCGTTCCAGATTGTGTACATCATTACTACCTCACTAAAAAAGCAGAAAATTATAAGCAGCTCTTGCGAAAGTCGCGGCAACGAACACGTAGTTCTCGAAATAATCCTAATAATAAAGTAAATAATACCAGTTCAAATATTGGAACTCTAGACATTTTAACTACGGGTGTTACGACGAGGTTGCAACGTGAGCAACAGCAAAAAACCCAAGAGAATCCTCAAAACAGTTCAACAGCGACATCAACtacaacgacgacgacaactACGACTACGTCAAGTGTATCAACGGCTGGTGCAACAACAATAGTGACCACTTCGACGACTCCTTTAAGTTCATCAACGTCGAGTATATGTTTGACAACGGACTCTGTAATAGCATCAACGACAGCTACAACGACATCCGTGTTGAGCACCACCACATCATCTGTCACAACGTCATCGACAACAACAACCGTAAAAGAGAATAGGGAAATCAATAAGGAAAacaaagagaataaaatggaGTCGAAAGAGACGCACCTTATCAAAGTGGAAGTGAAAGAAGAGCCGCAATTAAATTCCGAAACAGTGTCGGGAAAGGACGTCAAAGTAATAGAGGCAAACAACAGCGGTGGTGGAAACGTGGTGGCGGCCAGCAGGataaaggagaagaaaaaagataatcaCGCTGCCCCTATGGAAACCAGCGACGAGGAAGCTCAATCAATGGACACCATTGGTAAGTTAccttaa
- Protein Sequence
- METVSKQVQVVSGLGVGGPVGPVGPVGADLHHHHHPHSHSHPPHPHAHPHGHPHGPHGHSLVGVTSTPGRGQTQPPVSHNQHLPARSTPVKLNVNLKISLHKGILSLEDCWVIWYHWPAQNYVNIKSSSPVSPRTIGAGVTYVQGGAAASSAAAAAAAAAAGTAGGGSGGGPSIGGGGGSGSGGGGVGVNNTGGANSGAGVVGAGAGAGSVGNVVPAGNGNSNGTSNSVGAGSNSGGNSGTVGGAPGGYVAVPMAGSLRYIHPYQSTPTSASVPAVATMVTSASSAPTPVPVPAPAAAPANPPTVSQTPPPSLSGTVYAARDAYRSATTNVNERIAISVSSSPLSQIGVGVGVVTAEYAANSGIGSGMAGGRGDRPRISLLPPASVTPTPSPTAPDYQHVSSARNSRIALMPVQPDQYCNRTAVEMANLQEAPPFKKIRLSQPTQIQLQSQSQSRCHSLSPADPCVKQEHVVQLQQPLRIDTRGQPTTEAYTPQTEAISPTLPEPNTQEDAQFRSTKDDLLQQISKVDREIAKRESQINKLRKKLKELEETANKPLEASGLKRQVEEQSQQPKHQSLAQKIYAENRRKAEEAHRLLERLGPKVELPLYNQPSDTSVYQENRTKHQTCMRARLIARLRREHAERASLHRQQSQTYAILVQEWHRKVERLEATQKRKSKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEMEDKKMRSYAVIPPLLLDTKQRRIAFQNRNGLLQPEELEALHSERKLINVWSSVEHELFKEKYLQHPKNFGTIAQSLEHKSVPDCVHHYYLTKKAENYKQLLRKSRQRTRSSRNNPNNKVNNTSSNIGTLDILTTGVTTRLQREQQQKTQENPQNSSTATSTTTTTTTTTTSSVSTAGATTIVTTSTTPLSSSTSSICLTTDSVIASTTATTTSVLSTTTSSVTTSSTTTTVKENREINKENKENKMESKETHLIKVEVKEEPQLNSETVSGKDVKVIEANNSGGGNVVAASRIKEKKKDNHAAPMETSDEEAQSMDTIGKLP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00220520;
- 90% Identity
- iTF_00227214;
- 80% Identity
- -