Lspi007534.1
Basic Information
- Insect
- Leistus spinibarbis
- Gene Symbol
- -
- Assembly
- GCA_933228875.1
- Location
- CAKOGB010000146.1:101324-118237[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.08 6.7 7.8 2.2 1 23 1079 1102 1079 1102 0.97 2 10 0.00018 0.015 16.1 7.2 1 23 2176 2198 2176 2198 0.98 3 10 0.00038 0.032 15.1 2.0 1 21 2204 2224 2204 2227 0.95 4 10 0.0002 0.017 15.9 0.4 1 23 2234 2257 2234 2257 0.96 5 10 0.0031 0.26 12.2 0.7 5 23 2266 2284 2263 2284 0.93 6 10 0.00037 0.031 15.1 1.2 1 23 2290 2313 2290 2313 0.93 7 10 9e-05 0.0076 17.1 3.0 1 23 2319 2341 2319 2341 0.99 8 10 0.41 34 5.6 0.4 2 23 2347 2367 2346 2367 0.93 9 10 1.7e-05 0.0014 19.4 5.3 1 23 2373 2395 2373 2395 0.98 10 10 0.003 0.25 12.3 4.6 1 23 2401 2424 2401 2424 0.95
Sequence Information
- Coding Sequence
- ATGTCGAACAATTCGGAAGCATTTGATTTCGATGAAATATGTAGAACATGTTTGTCAACCGATGAATTAAAATCATTAAATATTAATACTTCGACAGACGTATGTTTGGTTGATATGTTAATGTCATGTACATTCGTTGAGTTATATGAAAATGACGGTTTACCAACCAAAATTTGCCAAAATTGCATTCAAGAAGTAAATCGATCATACAATTTTGCACTAAAATGTCAAGAATCAGAGGAAAAATTACGATTAACTTTAAAAAATGATGAAAATCTACAAATTGGACCAACGAATAATAAAACTAAAGACCGTGTCAAAAAACGAATAATATCGCTTAAAAATAAAAGTGAAACATGTTTAAGTAGTAAAAATTTAAATAATGAAATTAAAATAATAAATAATACATTTGAAGATGTAAAATCGATTTATAATAGTAGTCAAAATGTACCATTAAATACTGAAAACTATCAAAATGAACTATCAAACAAAATAAAAATTGAAATACACGAAATTAAATTATTAAATAACGAAAACTATCAAAGTAAACTATCAAATATTGATTCTAATGAAATAAAAAATGAAAGTAAACTATCAAAAAATGAAAACTATCCAATTGAGTCATCAAATAGTGATAATTGTATCAAAATTGAAAACCAACAGAATAATGAGAAATATTTATCAAATGAAGAAAGTTATGGAAGTGAGCAATCAAATGAAGAAAGTGAAATATGTGTTATAAAAAAACGAAAAACAAGAAAATATAACGAAAACATTGGGCTGCCAGTACAAATATGTAATGATTGCGTTACTGAAATCAATCGCTCCTTCAAATTCATAATGAAATGTCGAGAATCAGAGGACAAGCTGCTGAAACTTTTAGAAAATAATATAAATGAAGAAATTGATATAATTAAACACGAAATACACGATGAGCCCGACTTACAATTTTCCGAATTTACCAATGAGACTGAAACTGATGTTAAGCCCAAAAATGAAATGCAATTTGATCTAAATAATACGAAACTATCATTAGATCTAGGATTCAACGATATAAAACAATCATTGAGTAGTCCAACATTATCAATCACAAATGAACATTTAATTTCTGTCAGTAACGGATTTAAAAGCGACTTAACAGAATCAACTGTTAGCTTAAATATAGTTAAATCAGAATTGCCTGAAATTAGTAATTCACTAAAAGACTCAATGGAACTACAATGTACCTTAAACCAGAATTTAGACTGGATAAAAAATGAAATAATTGAACCTGACACAAATACTTCAGCAATTGTTACAGTTAATCCTGAAATAAATGAGTTAGTTAGTTTCAAACTCGAAAATAACAACGATTCAGCAGAATTACCCAAAACGGGACCAAATCAGATAATTGAATCTTTGAATTGGCCGAAGGAAGAACTAAGTAGTGAAACTACCGAAACAGTCATAAATAACGCTAATCAACCATTTCTTATACCATTTAATCATTTACACCCTGTTGTAAGTTTAAAAAGATTAAATTTAAATTGTTTGCCTGGCAACATTTATTTAAACCCTCATCAATTATTTGTGACCAATAATTCTGATATAAAGACTAAAATATCCATAAGTGCCCAAGAGAATATACAAAACTATCAAACTAATCAATCTCACCTAAATAACAGTTATGTTCCCACAAGTGCCAAAAACAATGTTCATAGTGAACTATCAAATGGATTAACTACTGAAATACCAACTAGTATCCCAGAAAGCGTTCAAAACTATCAAACGAATCAATCAAACTCTATAAATGAACACAGTACACTATCAAACAAAGCAACTATTTTAGACCTAAATAGATCTGTCCAAGATATTCAGAACTATCAAACGAATCCATCACATTCTCTAAATGCTCACAGTAAACTATCAAACCAAGACCTAAATAGATCTGTCCAAGATATTCAGAACTATCAAATGAATCCATCAAATTCTATAAATGCACACAGTAAACTATCAAATGAAACAACTATTTTAGACCCAAATAGATCTGTCCAAGATATTCAGAACTATCAAACGAATCCATCAAATTCTATAAATGCACACAGTAAACTATCAAATAAAGCAACTATTTTAGACCTAAATAGATCTGTCCAAGATAATCAGAACTATCAAACGAATCCATCACACTGTATAAATGCTCACAGTAAACTATCAAATGAAACAACAATTTTAGACCTATATAGATCTATTAGGCAAACTAAAGAATCCAAAAATGTCCAGAATTATCAAACTAATCAGAATACGCACAGTGAACTATCAAACTTAGTAGTTGGGCGAAACCTAAATAATAGTACAAAAGGTGTACAAAACTATCAAACGAATTTATTAAATACTATAAATTCTCATGGAGTGATTATGGCAAACCGAAATAATAGTTCTGTTATATCTGCTCAAAACTATCAAACAAACTCAATGGATCCTCACAGTGAACTATCAAATGGAGTGATTATGATTAATACTGGAGTATCTACAATTGCCCAAGATGTTCAAAACTATCAAACTGAACAATCAAACTCATTAAGCAGTCAACTATCAAATGATGGAACAAACCTAAATAATAGTGAGATTCAAACTGATACTGTGAAGAAAATTTATCAATTACGCAAACGAACTCCTCGCATTCAATCATATATTGAAGATTGCCAAAGTGAGCTATCAAGTAATGATGACTGTGATAGTATAGCATCAAATTATGAAGACTATGATAGTGAATCGTCAAGTAACGAAGATTATGAAGTATTAAGTAAACGACAACGGTTAGATAATAAAATCCAGACTGTACCGCCACTTATAATAAAGTTAAAAAATATAATTACTAAGAAAATGTTATTATCAAATAACAAAGTCGTGATTGACCCGCCTGTTGTTATAAATCAACAAATCGAACAGCCAAACTATCAAATCCAACAATCAAATATCGTAAATAATGAAATTGAACCGCCAAATACTAGTAGACGTCCACCTGTATGGCAAAATATTATAAGCTATGATAGCGTACAATCAAATAAGGACGCCGATCAAAATGGGCTATCAAATATTGCTGTAAACAGATCAGAAATAGTAATGAACTGTCAAAATATATTGAATACAGTTGATAAATTGCCTGGAGAAGAATTAGTTGGAACAGCAGATTGTTCATGTAATATGTGTCTAATACGTATCAACTACCGAGGAGTCCCTAAAATACCGATTATGTATACTTGTTCAATGTGTGGCGAAATATGTTGGTCAAAAAACTATTTAAATTTGCACCAAATGCGTAAACATACCAGAAATATACCATATGCATCAGCAAGTCGTAAACGACATACAGATCAACAAAGAAGACACATAAATCATATGAGCGAACTATCAAATATTCTAAACTATCAAAATGGACAATATAATCCGAATCATTTAGCTAAACGACCAGTTAATAACTTTCCAAATATATACCAAAATAAACAGTTACATACTATAAACTATGCAGGTGACCAATCAAACTATCAAAATAAACAATCAAACAATATTCATAATCACCAAATACCACGTAATACAAATTATCAAAGTGAACCATCAATTACTCAAACTAACAATATAAACTATCAACGTGAACTATCAAATACAATGAATAATCAAAATGGACAGTTAAATGTAATAAATCACTTAAGTGAACAATCAAATAACCAATTTGTTCTAAACTATCAACGCGGACTATCAAATGTTACGAATCACCAAAGTAGCCAATTAAACACCACTAATAATCAAAGTGAACTATCGAATATTATAAATATAAATGAATTATTAAATAATACAAGTAATATAATCGATCTAACAAATAATGAAACTGATGAACGTGAACTATCAAATAATTCTAACATTAATCATCAAAGTGCACAATCAAATAATGTAATCGATCTAACAATAAATTTAAAAGTGAACCACCAACTATCAATTGTTCGGAATCAATTAGACATGAATAGTCGTAGTGAACTATCACATACTACGCGTTACCAAAGCGAACAGTTAAATAATCAAAACGATTCGACAAACGTGAACTACCAACGCGAACAATCAATTCTTCGGGACCAATTGAGCATGAATAAGCAAAGTAAACTGTCAAAGATTACGCATCAACAAAGCGAACCATCAATTAATCAAATCGATTCGACAAATATTACAAACGTGAACTACCAACGCGAACTACCTAATGTTAGAGACGAATTAAACATGAATAGTCACGGTGAACTATCAAATATTACGAACCAAAGCGCACCAATCGTTCCGGCAAATACTACAAACGTTAACTACCAACGCGAACTACCAAATGTTAGAGACGAATTACACATGAATAGTCACGATGAACTATCAAATATTACGAACCAAAGCGCACCAATCGTTCCGGCAAATATTACAAACGTAAACTACCAACACGAACTACCAGACGTATTTAACATGAATACTCAAAGTATACTGTCAAATATTACGAATCATCAAAACGATCCGGCTAATATAAACTATCACGTACTATTAAATAATACGAATTACCACCGGGACCTATCTACCATAAATATTGAAAATAAACTGGCAAATACTATAAATCATCTTAGTGGACAACTAAATAAGACAAACTATCAAATCGATATAGCAAATGCTATGAATCAATGTAACAGCACGAATAATCAAAGTAAACTATCAAATAGTATAAATGACCGAATAGAACAATTAAATAATATAAACAATACAATCGATTTTACCGAGCTATCAAATGTCAGGAATCAATCTCACAGCACGAATAATCAAAGTAAACTATCAAATAGTATAAATGACCGAATACAACAATTAAATAATATAAGCAATACAATCGATTTTACCGAGCTATCAAATGTCAGGAACCAATCTCACAGCACGAATAATCAAAATAAACTATCAAATAGTATAAATGATCGAATAGAACAATTAAATAATATAAATAATACAATCGATTTTACCGAATTATCAAATGTCACGAATCATACAATGGACCAAACTGACATAATTACTAACCAGTGTGACTTATTACATATAAACTACGAAAGTGAACGGTTAAATAATCAAAGTAAAGAGTTAAATGATCCAAGTGAACTATCAAAGGTCACGAATCATTCAATGGACCAAACTGGCATAATTACTAACCAGTGTGACTTATTACATATAAACTATCAAAGTGAACGGTTAAATAATCAAAGTAAAGAGTTAAATGATCCAAGTAAACTATCAAATGTCACGAATCATTCAATGGACCAAACTGACATAATTACTAACCAGTGTGACTTATTACATATAAACTACGAAAGTGCACGGTTAAATAATCAAAGTAAAGAGTTAAATGATCCAAGTGAACTATCAAAGGTCACGAATCATTCAATGGACCAAACTGACATAATTACTAATCAGTGTGACTTATTACATATAAACTACGAAAGTGAAGGGTTAAATAATCAAAGTAAAGAGTTAAATGATCCAAGTAAACTATCAAAGGTCACGAATCATTCAATGGACCAAACTGACATAATTACTAACCAGTGTGACTTATTACATATAAACTACGAAAGTGAAGGGTTAAATAATCAAAGTAAAGAGTTAAATGATCGAAGTAAACTATCAAAGGTCACGAATCATTCAATGGACCAAACTGACATAATTACTAACCAGTGTGACTTATTACATATAAACTACGAAAGTGAAGGGTTAAATAATCAAAGTAAAGAGTTAAATGATCCAAGTAAACTATCAAAGGTCACGAATCATTCAATGGACCAAACTGACATAATTACTAACCAGTGTGACTTATTACATATAAACTACGAAAGTGCACGGTTAAATAATCAAAGTAAAGAGTTAAATGATCCAAGTGAACTATCAAAGGTCACGAATCATTCAATGGACCAAACTGACATAATTACTAACCAGTGTGACTTATTACATATAAACTACGAAAGTGCACGGTTAAATAATCAAAGTAAAGAGTTAAATGATCCAAGTGAACTATCAAAGGTCACGAATCATTCAATGGACCAAACTGACATAATTACTAACCAGTGTGACTTATTACATATAAACTACGAAAGTAAACGGTTAAATAATCAAAGTAAAGAGTTAAATGATCCATGTGAACTATCAAATGATCAAAGAGGAGGGTTAAATGATGACAATGGAGGGTTAAATAGTGAACAATCGAATAGTGTGAATTATCAAAAAGAGCGTTCGAGTAATGAAGAATATCTTAGTAAACTGTTAAAAGAAACGAAGTATCAAAATGATTTATCTATTAATATTGATAATCAAAGTAGTCAATTACAAATATCGGGTCGAAGTATTCTATACGATAGAATATTACCTACTGTGATGAGTAACGAAATTTATATGTGTATCCGGTGTAAAGATACGATTTCTAATGGCAGTATATCCGGAAATTTTTGCACGAAATGTTATTTAGAAAATAATATAAATGAACCGGAAACAGGGCATCAATGTGATAAGTGTGGCAAACATTTTAGACATACTAAAGCATTAAAATCACACATGATTATGCATGCGGAAATTAAAGCATTCCAATGTCCGAAATGCCCGAAATCCTTTCGGGGGAAAACAGCAATGGAGTCCCATATGCAATGTATGCATAGTAATACAGTAAACGAGTTTCCATGCCCAGATTGCGAGAAAAAATTCAAATTGGAAGTAACTCTAAGAGACCACCAACGATTTGTCCATGAAGGTATCGGAGTAAATTGTATCATTTGCGGCAAAAAAGTAAAAAACAAATTCTACTTAAAGCAACACATGGAAATACATATAGATGGGCAGGTTTTTACATGCATGATTTGTGACCAGAAATTTCAGCGGTCGAAAACTTTAAGAAACCACATGGGCAACGTACATTATAGTGGTGGGCCGTACACATGTACAATTTGTAATAAACAAGTTACGCACAAATTCGCGTTGCAAAGTCACATGAATTCACATGAGGAGAGATCGATTAAATGCAACATTTGTGGTAAACTACTAAAAAAAAATAATATTAATATGCACATGCAAGCGCATACCAACATAAGACCGCATGAATGTACAATTTGCGACAAAAAATTCAAGCTAAAAGACCATTTAACGCTTCATTTGCGGACGCATTCAGATGAACGCGCGTATGCGTGTACTCAATGTGATTTCACGTTTAAACTTCAACACCATTTAAAAGCGCATGTAGAACGGAAACATCCGGTCAAGAAGTCGAAAGCCGATTAA
- Protein Sequence
- MSNNSEAFDFDEICRTCLSTDELKSLNINTSTDVCLVDMLMSCTFVELYENDGLPTKICQNCIQEVNRSYNFALKCQESEEKLRLTLKNDENLQIGPTNNKTKDRVKKRIISLKNKSETCLSSKNLNNEIKIINNTFEDVKSIYNSSQNVPLNTENYQNELSNKIKIEIHEIKLLNNENYQSKLSNIDSNEIKNESKLSKNENYPIESSNSDNCIKIENQQNNEKYLSNEESYGSEQSNEESEICVIKKRKTRKYNENIGLPVQICNDCVTEINRSFKFIMKCRESEDKLLKLLENNINEEIDIIKHEIHDEPDLQFSEFTNETETDVKPKNEMQFDLNNTKLSLDLGFNDIKQSLSSPTLSITNEHLISVSNGFKSDLTESTVSLNIVKSELPEISNSLKDSMELQCTLNQNLDWIKNEIIEPDTNTSAIVTVNPEINELVSFKLENNNDSAELPKTGPNQIIESLNWPKEELSSETTETVINNANQPFLIPFNHLHPVVSLKRLNLNCLPGNIYLNPHQLFVTNNSDIKTKISISAQENIQNYQTNQSHLNNSYVPTSAKNNVHSELSNGLTTEIPTSIPESVQNYQTNQSNSINEHSTLSNKATILDLNRSVQDIQNYQTNPSHSLNAHSKLSNQDLNRSVQDIQNYQMNPSNSINAHSKLSNETTILDPNRSVQDIQNYQTNPSNSINAHSKLSNKATILDLNRSVQDNQNYQTNPSHCINAHSKLSNETTILDLYRSIRQTKESKNVQNYQTNQNTHSELSNLVVGRNLNNSTKGVQNYQTNLLNTINSHGVIMANRNNSSVISAQNYQTNSMDPHSELSNGVIMINTGVSTIAQDVQNYQTEQSNSLSSQLSNDGTNLNNSEIQTDTVKKIYQLRKRTPRIQSYIEDCQSELSSNDDCDSIASNYEDYDSESSSNEDYEVLSKRQRLDNKIQTVPPLIIKLKNIITKKMLLSNNKVVIDPPVVINQQIEQPNYQIQQSNIVNNEIEPPNTSRRPPVWQNIISYDSVQSNKDADQNGLSNIAVNRSEIVMNCQNILNTVDKLPGEELVGTADCSCNMCLIRINYRGVPKIPIMYTCSMCGEICWSKNYLNLHQMRKHTRNIPYASASRKRHTDQQRRHINHMSELSNILNYQNGQYNPNHLAKRPVNNFPNIYQNKQLHTINYAGDQSNYQNKQSNNIHNHQIPRNTNYQSEPSITQTNNINYQRELSNTMNNQNGQLNVINHLSEQSNNQFVLNYQRGLSNVTNHQSSQLNTTNNQSELSNIININELLNNTSNIIDLTNNETDERELSNNSNINHQSAQSNNVIDLTINLKVNHQLSIVRNQLDMNSRSELSHTTRYQSEQLNNQNDSTNVNYQREQSILRDQLSMNKQSKLSKITHQQSEPSINQIDSTNITNVNYQRELPNVRDELNMNSHGELSNITNQSAPIVPANTTNVNYQRELPNVRDELHMNSHDELSNITNQSAPIVPANITNVNYQHELPDVFNMNTQSILSNITNHQNDPANINYHVLLNNTNYHRDLSTINIENKLANTINHLSGQLNKTNYQIDIANAMNQCNSTNNQSKLSNSINDRIEQLNNINNTIDFTELSNVRNQSHSTNNQSKLSNSINDRIQQLNNISNTIDFTELSNVRNQSHSTNNQNKLSNSINDRIEQLNNINNTIDFTELSNVTNHTMDQTDIITNQCDLLHINYESERLNNQSKELNDPSELSKVTNHSMDQTGIITNQCDLLHINYQSERLNNQSKELNDPSKLSNVTNHSMDQTDIITNQCDLLHINYESARLNNQSKELNDPSELSKVTNHSMDQTDIITNQCDLLHINYESEGLNNQSKELNDPSKLSKVTNHSMDQTDIITNQCDLLHINYESEGLNNQSKELNDRSKLSKVTNHSMDQTDIITNQCDLLHINYESEGLNNQSKELNDPSKLSKVTNHSMDQTDIITNQCDLLHINYESARLNNQSKELNDPSELSKVTNHSMDQTDIITNQCDLLHINYESARLNNQSKELNDPSELSKVTNHSMDQTDIITNQCDLLHINYESKRLNNQSKELNDPCELSNDQRGGLNDDNGGLNSEQSNSVNYQKERSSNEEYLSKLLKETKYQNDLSINIDNQSSQLQISGRSILYDRILPTVMSNEIYMCIRCKDTISNGSISGNFCTKCYLENNINEPETGHQCDKCGKHFRHTKALKSHMIMHAEIKAFQCPKCPKSFRGKTAMESHMQCMHSNTVNEFPCPDCEKKFKLEVTLRDHQRFVHEGIGVNCIICGKKVKNKFYLKQHMEIHIDGQVFTCMICDQKFQRSKTLRNHMGNVHYSGGPYTCTICNKQVTHKFALQSHMNSHEERSIKCNICGKLLKKNNINMHMQAHTNIRPHECTICDKKFKLKDHLTLHLRTHSDERAYACTQCDFTFKLQHHLKAHVERKHPVKKSKAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -