Basic Information

Insect: Leistus spinibarbis
Gene Symbol: -
Assembly: GCA_933228875.1
Location: CAKOGB010000020.1:268044-270452[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0083 0.69 10.9 7.1 1 23 163 186 163 186 0.95

2 10 0.052 4.4 8.4 1.9 1 23 196 218 196 218 0.97

3 10 8.4e-05 0.007 17.2 1.9 5 23 264 283 260 283 0.91

4 10 0.033 2.8 9.0 0.9 1 21 331 351 331 352 0.93

5 10 7e-06 0.00059 20.5 3.6 3 23 386 406 384 406 0.96

6 10 1.1e-06 9.1e-05 23.1 0.5 1 23 412 434 412 434 0.98

7 10 0.00033 0.028 15.3 3.8 1 19 440 458 440 463 0.91

8 10 6.6e-08 5.5e-06 26.9 0.7 1 23 469 491 469 491 0.99

9 10 5.2e-07 4.3e-05 24.1 2.0 1 23 497 519 497 519 0.99

10 10 9.4e-07 7.9e-05 23.3 0.9 1 23 525 547 525 547 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0083	0.69	10.9	7.1	1	23	163	186	163	186	0.95
2	10	0.052	4.4	8.4	1.9	1	23	196	218	196	218	0.97
3	10	8.4e-05	0.007	17.2	1.9	5	23	264	283	260	283	0.91
4	10	0.033	2.8	9.0	0.9	1	21	331	351	331	352	0.93
5	10	7e-06	0.00059	20.5	3.6	3	23	386	406	384	406	0.96
6	10	1.1e-06	9.1e-05	23.1	0.5	1	23	412	434	412	434	0.98
7	10	0.00033	0.028	15.3	3.8	1	19	440	458	440	463	0.91
8	10	6.6e-08	5.5e-06	26.9	0.7	1	23	469	491	469	491	0.99
9	10	5.2e-07	4.3e-05	24.1	2.0	1	23	497	519	497	519	0.99
10	10	9.4e-07	7.9e-05	23.3	0.9	1	23	525	547	525	547	0.97

Sequence Information

Coding Sequence: ATGGATGAAAACCACCAACTGCTGGAGGACGTTTCGCCGCCGTTCATGATGCCGAGACTCGAAGTACAGCCCCAGCTCCTCTCCAGCGAGTTGCTGCCCTCGCATAGCTCCCTTGTCGTAGAGATGAACAACTCCGAGTATTTACCAAGTAGTTACGCCACGGATGAACTACTTGGGCACGATTTGACGGATGAAGACCGTAACCTGGCGGCGGCGTTGGTCGCTGTGCAACTGGTGCAACAGCAGAAACACCAACAATTGCAAGATCTTTCGGCATCGCCAAATCCAAACAACTCGTTAGCCTCACTCGTCGACAAAGCAGAAGAAACAATGAGAACGCCTGTGATAAATAGCACGTACTCGTTACATGATTCCGATTGCGACACACGTACTACCGAAACTAGTAGGATTATAAAAAAAAGTCTGCCGCATAAGAAACGAATTACGCGCAAATTGAAAAAACCGGTTGCGATTATGAAAAAGATGCACCGGTGTTCGAATTGCGATCAAACTTTCAACACGCTCGAAGAGCTCACCTCACACTCACACACCTGCCATATATCCATTGTAGTGCCAATCAACCAATTTGCATGCCAAATATGTAGCTTGATTTGCAATGATCAACTAACATTTTTCGAACATTTAAAAACGCACTATGAACCAACACCCACCATAGCATCGCCACCAAGTGCACCAAGCGCATTTAAACTACAACCGCCTGAGAACGAAGGTAAAACTAAAGAATCATTGTTAGGATCATTGTTGTCGCTGTCGCCCCTCAACTGTATCCAATGCGGCAAAACATTTCGCCGGCAAAAAACGTTCGAAACGCACATGCGTGATTTCCACCCAAAAATCGAGgatgaattcagcgagccagaagacctaatggagggaatacgttgcgtggtcgaCCGAGAGTCAGCAGCTGAAGAAGACGCCAACGATTCCAAAGTATGGTATGCTGCGTCTGCGGTAACCGCTGCTGAACACGTGTGCCATTTATGCGGCCAAGTATTAACGAGCAGCCAGGAAGTTTGTGACCACCTGAACGAGTGTAAAGCGACGCTCGATCCGAAAATCGAACAGAATTCGGATTCGGAGCTGAAAGGCCGCCCGCGAAAGAAACAGCGCCGAAAAACGGGCCAATTGTTttgtccgcactgcgatcgcgtgtttagccaccgtaattccctgatgtaccacatgcgggggcacaccggagagcgaccacaccaatgcgatgtatgcgggaagagtttctttgctgcaagcgcgttaaaagttcatatgcggttacactctggcgataaaccgtataagtgtgaattctgcgggcgacacttccgacaatggggcgatcttaagtaccactgcatttcaattcattcggaccagaagcagtaccagtgcgagtattgcggcaaagatttcgcgcgtaaatattcgctgattgtccatcggcgtatacatacaggcgaaaagaattaccgctgcgaattttgcggcaaaacatttcgggcgtcctcctatctgcagaaccatcggcgaatacacacagGGGAGAAACCACATCCGTGCGAGGTGTGCGGCAAACCGTTCCGGGTCCGTTCCGATATGAAGCGGCACTTAAACACGCATTCGCGAAGACGCGGTCCAGGACCAACCCCAGGTATTGGGCGAACGCGTACTATAAGCACAGCGGCAATCAAGATTCAAGATAGTAATTCGGCGACTGAGAGCATTGTGCCAGACGAGGAGTTAGAGGAAGAGAACACAATGGTGGATGAAGGCAATGAGGATATCGAGGAAGAGCAGCCGGTGGAGGAGGAAGTTGGGGCGGCGCACGAGTCGGAGGACAGTATTCACTACCAGCGCGATCCCCTCGAAACGGTCCGAGATGGCGCGAACACGTTGTTCAGTAATGGCCACCAATTATTCATCTGTTATCCCAGTGAGTTAACGTCGGCAACACGAGCAACCATCGAAGCACAATGGATTCAACAAACCGACGCTTGA
Protein Sequence: MDENHQLLEDVSPPFMMPRLEVQPQLLSSELLPSHSSLVVEMNNSEYLPSSYATDELLGHDLTDEDRNLAAALVAVQLVQQQKHQQLQDLSASPNPNNSLASLVDKAEETMRTPVINSTYSLHDSDCDTRTTETSRIIKKSLPHKKRITRKLKKPVAIMKKMHRCSNCDQTFNTLEELTSHSHTCHISIVVPINQFACQICSLICNDQLTFFEHLKTHYEPTPTIASPPSAPSAFKLQPPENEGKTKESLLGSLLSLSPLNCIQCGKTFRRQKTFETHMRDFHPKIEDEFSEPEDLMEGIRCVVDRESAAEEDANDSKVWYAASAVTAAEHVCHLCGQVLTSSQEVCDHLNECKATLDPKIEQNSDSELKGRPRKKQRRKTGQLFCPHCDRVFSHRNSLMYHMRGHTGERPHQCDVCGKSFFAASALKVHMRLHSGDKPYKCEFCGRHFRQWGDLKYHCISIHSDQKQYQCEYCGKDFARKYSLIVHRRIHTGEKNYRCEFCGKTFRASSYLQNHRRIHTGEKPHPCEVCGKPFRVRSDMKRHLNTHSRRRGPGPTPGIGRTRTISTAAIKIQDSNSATESIVPDEELEEENTMVDEGNEDIEEEQPVEEEVGAAHESEDSIHYQRDPLETVRDGANTLFSNGHQLFICYPSELTSATRATIEAQWIQQTDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -