Basic Information

Insect: Leistus spinibarbis
Gene Symbol: -
Assembly: GCA_933228875.1
Location: CAKOGB010000597.1:79766-85500[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00048 0.04 14.8 4.1 1 23 216 238 216 238 0.97

2 11 1.5e-05 0.0012 19.5 1.5 1 23 244 266 244 266 0.98

3 11 0.0038 0.32 11.9 3.8 1 23 272 295 272 295 0.95

4 11 0.015 1.2 10.1 5.2 1 21 301 321 301 323 0.95

5 11 0.00015 0.012 16.4 1.9 1 23 329 351 329 351 0.99

6 11 8.7e-06 0.00073 20.3 0.6 1 23 357 379 357 379 0.98

7 11 0.00038 0.032 15.1 1.4 1 23 387 410 387 410 0.97

8 11 4.8e-05 0.004 17.9 2.1 2 23 417 438 416 438 0.96

9 11 0.0002 0.017 16.0 0.3 1 23 444 466 444 466 0.98

10 11 1.5e-06 0.00013 22.7 2.5 1 23 472 495 472 495 0.97

11 11 6.1e-07 5.1e-05 23.9 0.3 2 23 510 531 509 531 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00048	0.04	14.8	4.1	1	23	216	238	216	238	0.97
2	11	1.5e-05	0.0012	19.5	1.5	1	23	244	266	244	266	0.98
3	11	0.0038	0.32	11.9	3.8	1	23	272	295	272	295	0.95
4	11	0.015	1.2	10.1	5.2	1	21	301	321	301	323	0.95
5	11	0.00015	0.012	16.4	1.9	1	23	329	351	329	351	0.99
6	11	8.7e-06	0.00073	20.3	0.6	1	23	357	379	357	379	0.98
7	11	0.00038	0.032	15.1	1.4	1	23	387	410	387	410	0.97
8	11	4.8e-05	0.004	17.9	2.1	2	23	417	438	416	438	0.96
9	11	0.0002	0.017	16.0	0.3	1	23	444	466	444	466	0.98
10	11	1.5e-06	0.00013	22.7	2.5	1	23	472	495	472	495	0.97
11	11	6.1e-07	5.1e-05	23.9	0.3	2	23	510	531	509	531	0.96

Sequence Information

Coding Sequence: ATGGCTGCACAATTTACTCCCAGCCAAATCAAGCTGGAAACGGCTGAGTCGGGTGAGAATATCACCGAAATCCAAACATATTTGGAGACCTTCAACAAGGAGATTGAAGGTGCTGATGGAACCACAACAATTACACAAGTATCAGATACCGAAGAAAACGATGACGGTGATGACGAAGGGGCCGAAGAAGGCACCTATTTCATTGATCAATCGGGGCATTACTACTACCAGGCATCTTCCGATCAGCAGCCCGTTATGGCAGTGGTATCGGGAGTTGATGGCGGCGATGAAGAGGAGGAATTCGTCATTAATCCGGATGGGGAAGACCAGGGGATTGATGGCGAGGAGGCAACGATAATCTCGGGGGAGCCGGGCAGCAACCAGGTGCTGATAAACTCGGGTGATGCATATCAAACGGTGACCATCGTGCCATCGGACACGAATCAGGGCGAGGTGAGTTATGTCCTCATTGTCCAACAGGATGAGAATGGCAAGGAAGACGAAGAAAACGCGGAAGATCAGGACATGACCGTGTACGATTTCGACGAGACGGAAGAGAGCGGGATGGTCGATTCAGAAGCCGAAGACGACAAATCGAAAATCGTCAAAATACTACCACGAAAATCGCAAACGGTCACACAAGCCCACATGTGTAACTACTGCAACTATACCAGTCCGAAAAGGTACTTGTTGTCGCGTCATATGAAATCACATTCAGAAGAACGTCCGCACAAGTGTAGTGTTTGCGAACGAGGGTTTAAAACATTGGCGTCGCTGCAGAATCACGTGAACACCCATACTGGCACGAAACCGCACCATTGCAAGTTCTGCGAATCCGCTTTTACCACATCTGGTGAACTGGTACGACATGTCCGGTACCGTCACACACATGAAAAGCCCCACAAATGCCATGAATGCGATTATGCTAGCGTCGAATTATCCAAACTCAAACGGCATATTCGGTGTCATACTGGCGAACGGCCTTATCAGTGTCCGCATTGTACATATGCAAGTCCAGACACGTTCAAATTAAAGCGTCATTTACGGATTCACACCGGCGAAAAGCCTTACGAATGCGATATTTGCCAAGCCCGATTTACACAATCGAATTCCCTCAAAGCCCACAAATTAACCCACAACGTGGGTGACAAGCCGATTTTTCAGTGTGAGCTTTGTCCGACAACATGTGGTCGAAAAACCGACCTAAGAATACATGTGCAAAAGCTACATACGTCGGATAAACCACTCAAGTGTAAACGTTGTGGAAAATCATTCCCAGATCGATACAGTTATAAGATTCATAACAAGAGCCATGAAGGTGAGAAATGTTTCAAATGCGAACTATGTCCGTACGCGTCGATTTCTGCGCGACATCTCGAATCCCATATGCTTATCCATACCGATCAGAAACCGTACCAATGCGATCAATGCGACCAGTCATTCCGACAGAAACAATTGCTCAAACGCCACCAAAACCTGTACCACAATCCGACGTATATCCCGCCACCACCCCGAGAAAAGACACAAGAATGTGCCGAATGTGGACGGGCGTTTAGGCACCGCGGCAACTTGATCCGGCACATGGCTGTCCATGATCCAGACTCCAGTGTCCAGGAGAAACAACTTGCACTCAAGTTGGGGCGCCAGAAGAAAATTCAAATCATCGATGGACAACAGGTGGAAGTAATGCCTGGCATAGATTCCGATGAAGATGATGACGGTGAAATGATGGCGGTCGAAGGTTCCGACGGACAGCAGTACGTTGTCCTGGAGGTTATACAACTAGCTGACGGCGATGGCGAACAAACAGTCGCTGTTGTATCCGGCAACGACGATGACATGATGACCGAAGAGCACATCTTAAGTGACGATTTGAATGACGAAGACGTGATCAAAGCGCTACAGAACAGTAGGAAACTTAATGAAAAAGAAGAAAAGAAAGTACAAGATCATGATGATATGAGTAATTGCTTCGGATTTGATGATGATGAGGATGACGATCAAGATATGGACTTGAAACCAGGAAAACATACCATAACGTTATCAAGTGAAATGGGTGATGATGATGATGATGATTAA
Protein Sequence: MAAQFTPSQIKLETAESGENITEIQTYLETFNKEIEGADGTTTITQVSDTEENDDGDDEGAEEGTYFIDQSGHYYYQASSDQQPVMAVVSGVDGGDEEEEFVINPDGEDQGIDGEEATIISGEPGSNQVLINSGDAYQTVTIVPSDTNQGEVSYVLIVQQDENGKEDEENAEDQDMTVYDFDETEESGMVDSEAEDDKSKIVKILPRKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHHCKFCESAFTTSGELVRHVRYRHTHEKPHKCHECDYASVELSKLKRHIRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICQARFTQSNSLKAHKLTHNVGDKPIFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYSYKIHNKSHEGEKCFKCELCPYASISARHLESHMLIHTDQKPYQCDQCDQSFRQKQLLKRHQNLYHNPTYIPPPPREKTQECAECGRAFRHRGNLIRHMAVHDPDSSVQEKQLALKLGRQKKIQIIDGQQVEVMPGIDSDEDDDGEMMAVEGSDGQQYVVLEVIQLADGDGEQTVAVVSGNDDDMMTEEHILSDDLNDEDVIKALQNSRKLNEKEEKKVQDHDDMSNCFGFDDDEDDDQDMDLKPGKHTITLSSEMGDDDDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01040310;
90% Identity: iTF_01040310;
80% Identity: -