Lspi011564.1
Basic Information
- Insect
- Leistus spinibarbis
- Gene Symbol
- -
- Assembly
- GCA_933228875.1
- Location
- CAKOGB010000257.1:390-25798[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 5.4e-05 0.0046 17.8 2.2 2 23 243 265 242 265 0.95 2 24 4.4e-06 0.00037 21.2 0.9 2 23 271 292 271 292 0.97 3 24 0.00058 0.048 14.5 3.6 1 23 298 320 298 320 0.98 4 24 0.008 0.67 10.9 2.6 1 23 581 603 581 603 0.98 5 24 1.7e-05 0.0014 19.3 1.2 1 23 609 631 609 631 0.98 6 24 0.51 43 5.3 6.0 1 23 637 659 637 659 0.98 7 24 0.001 0.085 13.7 1.2 1 23 665 687 665 687 0.98 8 24 5.9e-07 4.9e-05 23.9 1.6 2 23 1203 1224 1203 1224 0.97 9 24 0.00018 0.015 16.1 1.3 3 23 1231 1251 1230 1251 0.97 10 24 0.0007 0.059 14.3 7.8 1 23 1257 1279 1257 1279 0.98 11 24 0.00021 0.017 15.9 6.5 2 23 1728 1749 1727 1749 0.97 12 24 0.012 1 10.4 1.7 1 23 1756 1778 1756 1778 0.98 13 24 7.6e-05 0.0063 17.3 0.8 1 23 1784 1806 1784 1806 0.98 14 24 3.8 3.2e+02 2.5 6.4 1 23 1812 1834 1812 1834 0.96 15 24 0.13 11 7.1 3.0 1 23 1840 1862 1840 1862 0.98 16 24 0.11 9.6 7.3 1.5 1 23 1869 1891 1869 1891 0.97 17 24 0.38 32 5.7 0.7 1 14 1897 1910 1897 1911 0.90 18 24 9.4e-06 0.00079 20.1 1.6 2 23 2221 2242 2220 2242 0.98 19 24 0.0065 0.54 11.2 1.4 1 23 2249 2271 2249 2271 0.98 20 24 0.00042 0.035 15.0 1.4 1 23 2277 2299 2277 2299 0.98 21 24 1.2 97 4.1 3.7 1 23 2305 2327 2305 2327 0.96 22 24 0.00011 0.0094 16.8 5.3 1 23 2333 2355 2333 2355 0.99 23 24 1.1 93 4.2 4.2 1 23 2362 2384 2362 2384 0.97 24 24 0.36 30 5.7 2.7 1 17 2390 2406 2390 2407 0.91
Sequence Information
- Coding Sequence
- ATGTCTAACAAAAACTTCGAAGAGTTTGATTTCAATAAAGTTTGTCGAACATGTTTATCAAGTGGAGGAGAATTGATATCAATATTCGATTGTACTTCAACGAATTTGTGTTTAGGCGAAATGTTAACACAGTGCACATCAGTAAAATTTTACGTAAACAACATGCCTTCACAAATATGCCACGATTGCGTCCGTGGCTTATACCAATCCTACGAATTTGCAATAAAATGCAAGGAATCAGACGAGAAACTGCAGCTATATTTGAAAAATAAGTACAATCAAGAAATAAAACATGAAGTTGATTACGATTCCAATTCTATTCAACTTTTGCCTGAAGATAACGAAAATAATGAACCAATCGACTCGCCCACGTCTACTGGAATACGAAATAATGACTCATCAATAGAAACATGTATGCCACATAACTTATTCAATTCTTTCGTATTGTTAGAGAGATGCGATGAATCAGAATTGAGAAACCTGGCTCTACTAAATAGTGAAGCAATACCAAAATATAAAAGAATTGAAGAAAACTCGGTGAATACTAATAGTTTGCAAATTGTAAATAACACAAATCCAATTGATAATGCATCATCCAAAGAAACATGTATACCTCCTAATTGTTTCGTATTGTTAGAGAGATGTAATGAATCAGAATTAATAAATATGGTTCTTCCAAATAGTAAAGCAATACCAAATGATCAAAAAAGCACCGACATTAAACTAGAATGTACAATTTGTGAGATTTTTTTTACTAGTAATGATCACTTTAAACGCCATATGAAATACGTTCATGAAAGAAAGAAACCAACATGTACGATTTGTGGGAAATTTTTCAACAGTAAATTTGATCTGTCACGTCATATGATTGTACATGTACAGCAAAGTTTATACTCATGTAATATTTGCGGGGAACATTTTAAAGAAGAATGTAATTTTAGCGCTCATATGCTTAAGCACAACACCGAAGAACAATCTAGCAATGAGGAACATCAAGATGATGTGGTTCTTCAAAATAAGCTATCAAACGCTGACGATTGTCAAAATGATCGCTTGATCTTTGAACCATCGAATATTGATATTAAAGATTTTTTACAAATAAATATAGATGCAAATAGTAGCATATCAGATAATATATTATTAAATAATGTATGTAATACAAGCGAAAGTGATAGATCAAATATAGAAGAATGTGAAAGTGTTCGATCAGCGAATATAGACAGTCAAAATCCATCTAACTGTAAAATGTATGGAATACGAAAACGAAATCTTCGGGCCCAATTATATGTCAAATACAACGATGAAAGCTGTCGAAGTGAAACATCAAATAGTGATCAGTGTCAGAGCGCATTATCAAACTATACAGACTTTGAAAGTGAATCATCAAATGATGAAGATTATGAAGATTATCAAAATGAATATCCATTCGTAGACAATTGTAATAGTAATGCATCAAATAATGAGATCTCTCAATGTAAACGTACAAATATTATAGACTGTCCAAGCGAACCATCAACAATTGAATATGTTCAATGTAATCAAATAAAAACGGAGGACACACAAAATGAACTATTAAGAAATATAGACTACAATACTGAAGATAATGAACGTAACCAATCGAACGATGATATCAAAATTGAACCACCATGTAATGAGAACGGTCAAACAGAAGGATCAAATACTGATAACTGCGAACGTGAGCAACAAAGCAAAGAAACGCACACCAATACCAAAAAACGTCACAAATGTCTTGTTTGCGCGCATCCATTCCGTAAACTCACCGATTTAACCGAACACATGAAAGTACACAATGGAAAAAATCCGTTCACATGCTCATTTTGTGGAAAAATATTTTTCTCACCACAGACTCTAAGAATCCATATGCAATCACATGATGACGATAAACCATACTCATGTACGAAATGTGATCTTAAATTTTCCTGTAAACAATATTTACATGCACATGAAAAGGTGCATATGGATGAAAAAAGACATAAATGTGAAGTCTGCAGTCGTTTATTCCGCAAAGCTGCTAACATGAGAATACATATAAAGATACATTCGGATATAATGTCTAGCAAAAATTTCAAAGAGTTTGATTTCAATAAAGTTTGTCGAACATGTTTAACAAGTGAAGCAGAAATGATATCAATATTCGATTGCACTTCATCAAATGTGTCTTTAGGCGAAATGTTAATGTTTTGCACACCAGTAAAATTTTACGCAAACAACATGCCTTCACAAATATGCTACGATTGCGCCAATGGATTAAAGCAATCCTACAAATTTGCAATAAAATGCAGGGAATCAGACGAGAAACTGCAGCTATATTTGAAAAATAAGAACAATCAAGAAATAAATGTATCCAAACATGAAGTAAATTACGTTTCTAATATTGTTCAACATTTGTCTGAAACAAACAAAGATAACGAAATATGTTCACATATAAATGAGAAGACAGCTTATAAAACAAGCAACTCATCAATCGTGTCTCTCACATCTATTAGAATACGAAATGACCTACGCGCCCCGATATCAGCTGTTGAAAATCAAAATGAACTGATCGCAGATCCATTAGCAATTATTCATACTCAAAATGTAGCCAAAGAAAATATAATTGAAGATCGTACTGAAACAATAACACTGGATGAGCCACAGACGGAACAAAACTATCAAATACGAAACTGGTTAAAAAGTGAAATTAACTACAGAAATGAAACAAATCATTCAATTCCAATTGATAATAAGAATCATATGCCTGCAATGAATGAGTTAATAACTGATACAACTTTTGAAAATGACACCGACATAAAAATGATTCTGAGGGACCCACTTGAAATACATACTCAAAATGTTGCTATGGAAAATACAACTGAAGATCGTACTGATGCAATAACAACACTAGATAAGCCGCAAACGAAACAAAATGATCAAATCCAGAATTTAACCTGGTTAAAAAGTGAAATAAATGACGGAAATGAAACAAGACATTCAATTCCAATTGGTAATAAGAATCATGTGCCTGCAATGAATGATGAAAATATAACTGAAGATCGTACTGAAGCAATATCAACACTAGATGGTTCACAAATGGAACAAAATGGTCAAATTCGGAATTTTAGTGGAATAAAGTACGGAAATGAAACAAATCATTCAATTCCAATTAGTAATGAGAATCATATGTCTGTAATTAATAATTTAATAACTGATACAACTTTCGAAAATGACACCGACTTAAAAGTGATTCTGAGGGACCCACTTGAAATCAATCTATCGGTTGAACTAGGTGCCCCCCAGAAAATTGAATCATCACCTGATAAAACAATATTGTCATCAACTCTTGCACGTCCGAAACGTGAAATAAGTTATGAAACAAGAATTGAGGGAAACTCTGTCGATACTAATACATTGCAAATTCCAAATAACACAAATGTTATAATAGAACCAATTGATAATGTATCATCAAAAGAAACATGCATACCTCTTAACATATCAAATTGTTTCGTATTGTTAGAGAGATGTGATGAATCAGAATTAATAAACATGGTTCTGCCAAATAGTAAAGCAATACCAGATGATCAAAAGAACACCAACATTAAATTGGGTCAATGTACAATTTGTGAGAAAACTTTTAAAAGAAAAGATCAATTAAGACGCCATATGGTAGTTCATGAAAGAAAGAAACCATTTTGTACGGTTTGTAAGAAAAATTTTAGAGGAAATTATGAACTATCACGTCATATGAGTGTGCATGCAAAGAATAGTCAATATTCATGTAATATTTGCGGGGAACATTTTAAACAAAAGTGTCATTTTAGCGTTCATATGCTTAAGCACGCCAGTGTAACTAAGCAATCAAATACCGAAGATAAATCTAGTAATGCAGATCACCAAGATGATGAACACTCGGAAAATGTAGTTCAACAAAATAGCCGCCCAATTCATAGTAACACGCTTGAAAGTGAATTATCGAAAATTCATAATAAGGAAAATTTACAATCAAATACAGATGTTAAAAGTAAGTTAACAAATAATAAACTGCTATCCATAAACATGATCTATCAACACGAACCAGTTAACAATGTAGCCGATCAAAGTGAAAGATCAAATACTGAAGAATATCCAAATGAACGATCAAATACCGAAGAATGTGAAAGTATTCGATCAGAGAATAAGAACAGTCAAAATATACCATCTAACAATTCGGACTTCCAAATGTATGCATTACGAAAACGAACTCCTCGAGCCCAATCACATATTGAAAACAACGATGAAGACTGTCAAAGTGAAACATCAAATAGTGATCAGTGTCAGAGCGCATCATCAAACTATGCACACTCTGAAAGTGAATCATCAAGTGATGACGATTATGAAGTGAATATACCAACTAGTGACCAAGAAACGGAACGATCTATTAACGTGAATGATCAGACTGATTTAGACACTGAAAGTGATGAAAATTATGAAGTGGATATACTAACTATTGACCAAGAAACTATAGGATCTATAAATGTGATAGATCAGACTGATCTGTTTAATCATCATATAAACTCTGAAAGTGAGGTATCACTTAATATGGACCATGTACCCGCAAAAAATGTTTATAAAGTGTGTCAAAGTGAACTATTAAATAGTAAGAACTGTCGAGGTGAATTAGTAAATAATACAGATTTTCAAAATATACCCTTAAACACTGCGATCGGCCGAAATGAACTATTAAATGATGCGAGTTGCCACAATGATCTATCAATAACCGAAGAATGTCAAGATATACTATTACATAGTGAGCAGTATCAAAGTGAACAATTAAGTAACATAGACTCTCAAAATAAACATTCAAACGCAGATAATTGTCAAAGCAATGCATCAAATAATGAGATCTCTCAATGTGAACGTACAAATATTAAAGACTTTGAACCATCAAATAATGAAATGATTCAAAGTAATCGAATAAATAAGGAAGACAATCAAAATGAAGTATTAAATATTATAGATTCCAAAATGAATCTATTAAATACAGAAAATAATCAACGTAACCAATCGAACGTTAAGGATTACGAAATTGGACCACTATCTAAAGAGAACGGTCAAACCGATGGATCAAACACTGCAAACTATGAACATAAGCTAATGAGTAACGAGACCTGTACGAGTGAATTATTAAATGCGAATATAAATAAAACGTGTACAACTTGCGGCAAAAAGTTTAAAAAACCCTGTTTTTTAAAGAAACACATGCAAACGCATACCAATTACCAAAAACGTCACAAATGTCAAGTTTGCGCGCATCCATTCCGTGAAGTCACCGATTTAACAGAACACATGAAAGTACACAATGGAAAAAATCCTTTCACATGCTCATTTTGTGGAATAATATTTTTCTCACCAAAGACTCTAAGAATCCATATGCAATCACATGATGACGATAGACCACACTCATGTACGAAATGTGATCTTAAATTTTCCTGTATATCTTATTTACACGCACATGAAAAGGTGCATATGGATGAAAAAAGACATAAATGTGAAGTCTGCAGTCGTTTATTCCTCAAAGCCTCTTACTTGAGAGATCATACGAAGACACATTTGAGTAAAAAGAAATCATATTCCTGTTCAATTTGTATGAAATCATTCTTGAAGAAAAGTAATTATGATGATCATATGTATATTCACAATAATAAAACAGCATTTCCTTGTCCGATTTGCAACCATTTCTTTAATACTAAAGCACAGGAGGGTTCCAAATTTTGGGGGCCTATAACGCCGGTCCTGTACAGACGATTGGATTTAAAATGCGACGGGAACATCACGGGCATGGAAATTATATGTATACCGAATTTCATCAAAATCGGCCCGGTACCTTCAGACGAGTTGCGGTCACAAACTCAGGTTTACGAAAACAACATGCCTACTCAAATATGTCACGATTGCGTCAACGGCTTAAACCAGACCTACAAATTTGCCATAAAATGCAGGGAATCAGACGAGAAACTGCAGCTATATTTACAAAATAAGAATCAAGAAATTAATATATCCAAACATGAAGTAGGTAACGTTACCAATATTATTCAACATTTGCCTGAAGAAACTCAAAACAATGAAAATGTATATTCACATTTAAATGAGATTGTTTATAAATCAAGCAACTCACCAGTCGAGTCCCTCACATCTATTATAATACGAAATGACCTCGACCCGCTATCAACTGGTAAAAATCAAGATGATCTGAACACAATTATTTCTACTCAAAATGTTGCTAAAGAAAATATAACTGCAGCACTAGATAATCCACAAACGGAAGAAAATGATTTAAACTGGTTAAAAAGTGAAACAAAGCCTTCAATTGTTAATGAGGATCATATGCCTGCAATGAATGATTTCATAACTGATACAACATTCGAAAATGACAGCGACAGAAAAATGATTCTGAGGGATCCACTTGAAATCATTAATATATCGGTGGAACAAGATACTTACCAGAAAATTGAACTATTGTCTGATCAAACATTATCGTCAACTCTAGCAAGTCTGAAATGTGAAGTAAGTAACGAAACTAGAATTGACGAAGATAACCAATCGAACGAAACAGAGGACAGTCAACGTGAGCTAACAAGCATCGAGCCTCGTAAACGTGATTTATTAAACGCTCGTAAAAATATTAAGTGTACAATGTGCGAAAAAAAATATACAAAGCGCTCTTCTTTAGTGGTACATATGAGAACGCATACCAAAATCAAAAAACGTCACAAGTGCCGAGTTTGCGCTCACCCATTTCGTGAAGCCACCGAATTAACAGAACACATGCAAGTGCACACTGGAAAGAATCCATTCACATGTTCATTTTGTGCGAAAATATTTTTCTCACCAAAAACTCTCCGAATCCATATGCAATCCCATGATGACGATAAACCATACTCATGCTCGAAATGTGATCTTAAATTTTCCTGTTCAAGATATGTACAAACACATGAACAAGTGCATATGGATGTTAAAATATATAAATGTAAAGTCTGCAGTCGCTCATTCAACCATGTTTCTACCTTCAGAAATCATATGATGCGGCATTCGAGCGAAAAAAAATCATATACCTGTACAATTTGTATGAAATCATTTTTGAGAAAAACTACTTATAATGATCATACGCATATTCATAACACTAACACAGAGTTTCCTTGTCCGATTTGCAACCATTATTTTAAAACTAAAGCACAGTTTTGCCAGTTTGCGATGCGGATCTTTTCGAGTGATACTCTTCAGAAGGTTGCGAGTGGATTTATGATGCTATTACAAGGACTCGAGGGGCGGTAA
- Protein Sequence
- MSNKNFEEFDFNKVCRTCLSSGGELISIFDCTSTNLCLGEMLTQCTSVKFYVNNMPSQICHDCVRGLYQSYEFAIKCKESDEKLQLYLKNKYNQEIKHEVDYDSNSIQLLPEDNENNEPIDSPTSTGIRNNDSSIETCMPHNLFNSFVLLERCDESELRNLALLNSEAIPKYKRIEENSVNTNSLQIVNNTNPIDNASSKETCIPPNCFVLLERCNESELINMVLPNSKAIPNDQKSTDIKLECTICEIFFTSNDHFKRHMKYVHERKKPTCTICGKFFNSKFDLSRHMIVHVQQSLYSCNICGEHFKEECNFSAHMLKHNTEEQSSNEEHQDDVVLQNKLSNADDCQNDRLIFEPSNIDIKDFLQINIDANSSISDNILLNNVCNTSESDRSNIEECESVRSANIDSQNPSNCKMYGIRKRNLRAQLYVKYNDESCRSETSNSDQCQSALSNYTDFESESSNDEDYEDYQNEYPFVDNCNSNASNNEISQCKRTNIIDCPSEPSTIEYVQCNQIKTEDTQNELLRNIDYNTEDNERNQSNDDIKIEPPCNENGQTEGSNTDNCEREQQSKETHTNTKKRHKCLVCAHPFRKLTDLTEHMKVHNGKNPFTCSFCGKIFFSPQTLRIHMQSHDDDKPYSCTKCDLKFSCKQYLHAHEKVHMDEKRHKCEVCSRLFRKAANMRIHIKIHSDIMSSKNFKEFDFNKVCRTCLTSEAEMISIFDCTSSNVSLGEMLMFCTPVKFYANNMPSQICYDCANGLKQSYKFAIKCRESDEKLQLYLKNKNNQEINVSKHEVNYVSNIVQHLSETNKDNEICSHINEKTAYKTSNSSIVSLTSIRIRNDLRAPISAVENQNELIADPLAIIHTQNVAKENIIEDRTETITLDEPQTEQNYQIRNWLKSEINYRNETNHSIPIDNKNHMPAMNELITDTTFENDTDIKMILRDPLEIHTQNVAMENTTEDRTDAITTLDKPQTKQNDQIQNLTWLKSEINDGNETRHSIPIGNKNHVPAMNDENITEDRTEAISTLDGSQMEQNGQIRNFSGIKYGNETNHSIPISNENHMSVINNLITDTTFENDTDLKVILRDPLEINLSVELGAPQKIESSPDKTILSSTLARPKREISYETRIEGNSVDTNTLQIPNNTNVIIEPIDNVSSKETCIPLNISNCFVLLERCDESELINMVLPNSKAIPDDQKNTNIKLGQCTICEKTFKRKDQLRRHMVVHERKKPFCTVCKKNFRGNYELSRHMSVHAKNSQYSCNICGEHFKQKCHFSVHMLKHASVTKQSNTEDKSSNADHQDDEHSENVVQQNSRPIHSNTLESELSKIHNKENLQSNTDVKSKLTNNKLLSINMIYQHEPVNNVADQSERSNTEEYPNERSNTEECESIRSENKNSQNIPSNNSDFQMYALRKRTPRAQSHIENNDEDCQSETSNSDQCQSASSNYAHSESESSSDDDYEVNIPTSDQETERSINVNDQTDLDTESDENYEVDILTIDQETIGSINVIDQTDLFNHHINSESEVSLNMDHVPAKNVYKVCQSELLNSKNCRGELVNNTDFQNIPLNTAIGRNELLNDASCHNDLSITEECQDILLHSEQYQSEQLSNIDSQNKHSNADNCQSNASNNEISQCERTNIKDFEPSNNEMIQSNRINKEDNQNEVLNIIDSKMNLLNTENNQRNQSNVKDYEIGPLSKENGQTDGSNTANYEHKLMSNETCTSELLNANINKTCTTCGKKFKKPCFLKKHMQTHTNYQKRHKCQVCAHPFREVTDLTEHMKVHNGKNPFTCSFCGIIFFSPKTLRIHMQSHDDDRPHSCTKCDLKFSCISYLHAHEKVHMDEKRHKCEVCSRLFLKASYLRDHTKTHLSKKKSYSCSICMKSFLKKSNYDDHMYIHNNKTAFPCPICNHFFNTKAQEGSKFWGPITPVLYRRLDLKCDGNITGMEIICIPNFIKIGPVPSDELRSQTQVYENNMPTQICHDCVNGLNQTYKFAIKCRESDEKLQLYLQNKNQEINISKHEVGNVTNIIQHLPEETQNNENVYSHLNEIVYKSSNSPVESLTSIIIRNDLDPLSTGKNQDDLNTIISTQNVAKENITAALDNPQTEENDLNWLKSETKPSIVNEDHMPAMNDFITDTTFENDSDRKMILRDPLEIINISVEQDTYQKIELLSDQTLSSTLASLKCEVSNETRIDEDNQSNETEDSQRELTSIEPRKRDLLNARKNIKCTMCEKKYTKRSSLVVHMRTHTKIKKRHKCRVCAHPFREATELTEHMQVHTGKNPFTCSFCAKIFFSPKTLRIHMQSHDDDKPYSCSKCDLKFSCSRYVQTHEQVHMDVKIYKCKVCSRSFNHVSTFRNHMMRHSSEKKSYTCTICMKSFLRKTTYNDHTHIHNTNTEFPCPICNHYFKTKAQFCQFAMRIFSSDTLQKVASGFMMLLQGLEGR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -