Basic Information

Insect: Leistus spinibarbis
Gene Symbol: -
Assembly: GCA_933228875.1
Location: CAKOGB010000079.1:202451-205796[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0013 0.11 13.4 1.7 2 23 156 177 156 177 0.98

2 16 2.4e-05 0.002 18.9 4.8 2 23 184 205 183 205 0.97

3 16 0.0014 0.11 13.4 3.5 1 23 214 236 214 236 0.97

4 16 0.0038 0.32 11.9 1.7 1 23 321 343 321 343 0.97

5 16 0.00012 0.01 16.7 4.2 2 23 350 371 349 371 0.97

6 16 0.0024 0.2 12.6 0.6 3 23 397 418 395 418 0.94

7 16 0.00035 0.029 15.2 8.9 1 23 495 517 495 517 0.96

8 16 0.00095 0.079 13.9 0.4 1 23 523 546 523 546 0.95

9 16 3e-06 0.00025 21.7 0.9 1 23 551 573 551 573 0.98

10 16 3.1e-06 0.00026 21.7 5.2 1 23 585 607 585 607 0.97

11 16 5.8e-07 4.9e-05 24.0 0.4 1 23 614 636 614 636 0.97

12 16 2.6e-05 0.0022 18.8 1.6 3 23 648 668 646 668 0.92

13 16 0.00036 0.03 15.2 4.1 1 23 674 696 674 696 0.99

14 16 1.1e-05 0.00091 20.0 1.8 1 23 702 724 702 724 0.96

15 16 2.9e-07 2.5e-05 24.9 0.3 1 23 730 752 730 752 0.99

16 16 0.00021 0.018 15.9 0.1 1 23 758 782 758 782 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0013	0.11	13.4	1.7	2	23	156	177	156	177	0.98
2	16	2.4e-05	0.002	18.9	4.8	2	23	184	205	183	205	0.97
3	16	0.0014	0.11	13.4	3.5	1	23	214	236	214	236	0.97
4	16	0.0038	0.32	11.9	1.7	1	23	321	343	321	343	0.97
5	16	0.00012	0.01	16.7	4.2	2	23	350	371	349	371	0.97
6	16	0.0024	0.2	12.6	0.6	3	23	397	418	395	418	0.94
7	16	0.00035	0.029	15.2	8.9	1	23	495	517	495	517	0.96
8	16	0.00095	0.079	13.9	0.4	1	23	523	546	523	546	0.95
9	16	3e-06	0.00025	21.7	0.9	1	23	551	573	551	573	0.98
10	16	3.1e-06	0.00026	21.7	5.2	1	23	585	607	585	607	0.97
11	16	5.8e-07	4.9e-05	24.0	0.4	1	23	614	636	614	636	0.97
12	16	2.6e-05	0.0022	18.8	1.6	3	23	648	668	646	668	0.92
13	16	0.00036	0.03	15.2	4.1	1	23	674	696	674	696	0.99
14	16	1.1e-05	0.00091	20.0	1.8	1	23	702	724	702	724	0.96
15	16	2.9e-07	2.5e-05	24.9	0.3	1	23	730	752	730	752	0.99
16	16	0.00021	0.018	15.9	0.1	1	23	758	782	758	782	0.92

Sequence Information

Coding Sequence: ATGATTAACAAGGATAATAATTTGTGTCTGGACAAGATATGTCGCTCCTGTATGCTGGAGAACAAGGAAATGAGATCGGTTTATGAATCCAACACAGATGCAGTGCAACTTGCAGAAATGATAATGGCTTGTGCATCAGTCCAGGTGGCATCTGACGATGGCTTGCCGAATCTGATTTGTCCCAAATGTGAAGAACAATTGAACATTGCTTACCTATTTAAACAACAGTGCGAACGAACTGATACAACATTGCGGGAATACACAAATCATGCATTAACCAGTTCGATCAAAGAAGAATCTGAATCGTTAGATATAGTCGTGAAACCGGATATAGATGTGCTGGAGATATACGATGACGCAGACGACGCTCGGCATCATGACGATACGTTCGGCTCAGGATCAGAAAGTGTACACAGCAGTTATTCGGCGACAGTTGGCAAGAAAAAGAAATCTCCAAAGACGCGCCAGTGCCGCTATTGCAGCAAGATGCTGTCGACGAAAGAGGGCCTTAAATTACATGAAAGACGTCATACAGGTGAGAAATTAAAGACATGCCCCGTTTGCCATACAACGTTCACGAAATCAAATCACCTGATACGACATATGCAGCTGCATAATAAGCCGACGGACGAGTACAAGCACACGTGTCAGGAGTGCGGAATGGGCTTCATGAAGGCGACACACTTGCTGAAACACAAGCGGGAGCACAAGAAAGAAGCCGCTGACTCTGGCATGGGGGAGCCATCAGCACATACTGACGACGGTGACGGGGATGCGGACGGGGACGGGGACGGGGACGGCGATGAGGACGAAGCAGGTGCGCATGTGAAAAACGAAGTGGACAGTGACGATGTAGGCCATGCCGACCATGACCACGATCATGCCCATGCCCATGCCCATGTCCATGACGATGACAACAGGCCCAAGCTGCGCCCCAAGAAGGAGCCCCCGCACGATCATCATCCTTGTAAGGTGTGCAATAAACTTCTTACTACAGTCGCTGGTCTCCACATTCATATGAGGCGTCATACGGGCAAAAATCTCTCCACATGCTATATTTGCATGAAGTCATTCACGAAAACGAGTCATTTGAATCGGCACATGTTGACGCACGGTGTCACACCGGTCAAGAGCGCTGCCGTCCCCAAAGAGAAGAGCACCGAACCAAAGGAGAAAAAGTATTTGGCGTGCGAGTTTTGTGATCGGAAATTCGTGTACCGCAAAAGCTTCCTGTCACACATTCAACTGGAGCACCAAATTTCAGAGGACAGCGATACCCCACTGAGCGAATACGCAACCATTGTTACAAAATCGAAATTATCAGatgagaatggttcaaatggaaacaacaaagatggcacAATTGATAATGGAGACGACAAGACAGTGATGGAAAGCGAAGCTGGCGTCAGTGCGGCTCAGGGAGAACAAGACAACTTTGAGATGATGATGCTGGAGCAGGACGAGGCGAAGAAGGTGCAGCACGTGTGTCACGTGTGCAACCACAAGTtcacgcgcgccaaccatctaacgcgccacatgacgctccaccgcgccgtgctgttgcacaagtgcgaacgctgtgagaaagcgttcatgaccgccgagtacctggccgcgcacgtgcaagagtaccacgtggaccggccgtacgtgtgctccctgtgcaacaagccgttcagtcgtggcgaacatctcatccggcatttgaaggttcacgacaaagatgcgccggccggcaaagacgaccaacataagtgttccatctgcgagaaaacgttttcgcgctcggaccatttggcgcgccacaccaagctgcatctcgctcaggacaagcggcacgtgtgcggcgaatgcggcaaagcatttaaccgtctggataacttgcgtacgcatgcgcgtatccatacaggggtgcgcgatccgcagcggctacacttgtgcatttactgcggcaaggagttcaacaattcgagcaacatgattgtgcacatgcgacggcatacaggcgaacggccgtacaagtgtgcccagtgcggcaaagggttcccgcgctcgcacgacctcaagtgccacgagcgcacccactccggcgagaagccgtacttatgcacactatgcggcaagtcgttcaacaaaagcaacaaactactgcgccatacgcgcgtgcacactggcgaacggccgtacgtctgttcgctgtgcggccgcgcgttcacccaatccaacgatctggcgctgcacatgcggcggcacactggttcgcggccgtacgcgtgcggcatgtgtcccgctcgcttcatccaaagcggccagctgaaggcgcaccgacgctcgcagggccactggctggagacgccgcccgagCTGAAAGGCGCCCACCGGGTCACCCCGGTCACGCCCCTCGTTAATCCGCCGCCGATTAAATTCAAAACGCGTGTCCAACGCATCAAGGAGGAACCGACGATATTGGGCTTGGGGCACACGATCGGCCTTAGTGCGGTGGCAGCGCAAGTGGCGGCAGCGCAAGCGGCGGCGGCGGCGGCGGCGGCTGAAGCGGTAGCCAAACAGCGGCAGCATGATGGTGTGATGGCTGCGGAAAGCATTTCGGGCAGTGGGGCTGGCCCTTTACCGCTACCTCCGCCGTCGTTCGCTGCGTTCATACACAACAAGTCGCCGCAAAACGAACAGCAAGTGCACAACTTCAGTGTGAGTAATCGTAATGCGGTTGTGTTGAGTAGCAGTGGTGTGCACATGAGTGCTGCCGGTGATCAATCGCAAGCGCAATCGCAACAGCAATCACAGAGCGCGACCAGCGGCGCCGGCGGTGCGTCGTTTCACGAGAATGTAGAGCCAAGCACTTCATTCGCAAATAGTTTTACTGTCAGTAGTGAAGGTTACAGCTATCAGTCGTATGGCTAA
Protein Sequence: MINKDNNLCLDKICRSCMLENKEMRSVYESNTDAVQLAEMIMACASVQVASDDGLPNLICPKCEEQLNIAYLFKQQCERTDTTLREYTNHALTSSIKEESESLDIVVKPDIDVLEIYDDADDARHHDDTFGSGSESVHSSYSATVGKKKKSPKTRQCRYCSKMLSTKEGLKLHERRHTGEKLKTCPVCHTTFTKSNHLIRHMQLHNKPTDEYKHTCQECGMGFMKATHLLKHKREHKKEAADSGMGEPSAHTDDGDGDADGDGDGDGDEDEAGAHVKNEVDSDDVGHADHDHDHAHAHAHVHDDDNRPKLRPKKEPPHDHHPCKVCNKLLTTVAGLHIHMRRHTGKNLSTCYICMKSFTKTSHLNRHMLTHGVTPVKSAAVPKEKSTEPKEKKYLACEFCDRKFVYRKSFLSHIQLEHQISEDSDTPLSEYATIVTKSKLSDENGSNGNNKDGTIDNGDDKTVMESEAGVSAAQGEQDNFEMMMLEQDEAKKVQHVCHVCNHKFTRANHLTRHMTLHRAVLLHKCERCEKAFMTAEYLAAHVQEYHVDRPYVCSLCNKPFSRGEHLIRHLKVHDKDAPAGKDDQHKCSICEKTFSRSDHLARHTKLHLAQDKRHVCGECGKAFNRLDNLRTHARIHTGVRDPQRLHLCIYCGKEFNNSSNMIVHMRRHTGERPYKCAQCGKGFPRSHDLKCHERTHSGEKPYLCTLCGKSFNKSNKLLRHTRVHTGERPYVCSLCGRAFTQSNDLALHMRRHTGSRPYACGMCPARFIQSGQLKAHRRSQGHWLETPPELKGAHRVTPVTPLVNPPPIKFKTRVQRIKEEPTILGLGHTIGLSAVAAQVAAAQAAAAAAAAEAVAKQRQHDGVMAAESISGSGAGPLPLPPPSFAAFIHNKSPQNEQQVHNFSVSNRNAVVLSSSGVHMSAAGDQSQAQSQQQSQSATSGAGGASFHENVEPSTSFANSFTVSSEGYSYQSYG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -