Basic Information

Insect: Leistus spinibarbis
Gene Symbol: -
Assembly: GCA_933228875.1
Location: CAKOGB010000146.1:208925-216339[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 1.6e-06 0.00014 22.5 1.7 1 23 326 348 326 348 0.97

2 22 1.4e-05 0.0012 19.6 0.3 1 23 353 375 353 375 0.98

3 22 1.7e-05 0.0014 19.3 2.1 2 23 378 399 377 399 0.96

4 22 0.0016 0.13 13.2 0.2 2 23 406 428 405 428 0.94

5 22 0.0024 0.2 12.6 1.6 2 23 439 461 438 461 0.93

6 22 0.0014 0.12 13.3 3.0 1 23 493 514 493 514 0.99

7 22 0.00037 0.031 15.1 5.2 1 23 520 542 520 542 0.97

8 22 0.12 10 7.2 0.4 1 23 560 582 560 582 0.97

9 22 4.7e-05 0.0039 18.0 0.1 2 23 588 609 587 609 0.97

10 22 0.00013 0.011 16.5 1.3 2 19 616 633 615 637 0.93

11 22 0.0001 0.0087 16.9 0.7 2 23 644 666 643 666 0.96

12 22 7e-05 0.0059 17.4 1.7 2 23 854 876 853 876 0.96

13 22 5.5e-05 0.0046 17.7 1.6 2 23 906 928 905 928 0.96

14 22 0.023 1.9 9.5 3.6 2 23 934 955 934 956 0.94

15 22 3.9 3.3e+02 2.5 0.8 11 23 1302 1314 1302 1314 0.91

16 22 0.00024 0.02 15.7 0.1 1 23 1325 1347 1325 1347 0.98

17 22 9.5e-05 0.008 17.0 2.7 1 23 1353 1375 1353 1375 0.98

18 22 2.1e-05 0.0018 19.0 2.5 1 23 1409 1431 1409 1431 0.97

19 22 0.0062 0.52 11.3 0.6 2 23 1438 1459 1437 1459 0.97

20 22 7.9e-05 0.0066 17.2 1.0 1 23 1464 1486 1464 1486 0.98

21 22 4.2e-05 0.0035 18.1 2.9 1 23 1491 1513 1491 1513 0.97

22 22 5.3e-05 0.0045 17.8 0.4 1 23 1518 1541 1518 1541 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	1.6e-06	0.00014	22.5	1.7	1	23	326	348	326	348	0.97
2	22	1.4e-05	0.0012	19.6	0.3	1	23	353	375	353	375	0.98
3	22	1.7e-05	0.0014	19.3	2.1	2	23	378	399	377	399	0.96
4	22	0.0016	0.13	13.2	0.2	2	23	406	428	405	428	0.94
5	22	0.0024	0.2	12.6	1.6	2	23	439	461	438	461	0.93
6	22	0.0014	0.12	13.3	3.0	1	23	493	514	493	514	0.99
7	22	0.00037	0.031	15.1	5.2	1	23	520	542	520	542	0.97
8	22	0.12	10	7.2	0.4	1	23	560	582	560	582	0.97
9	22	4.7e-05	0.0039	18.0	0.1	2	23	588	609	587	609	0.97
10	22	0.00013	0.011	16.5	1.3	2	19	616	633	615	637	0.93
11	22	0.0001	0.0087	16.9	0.7	2	23	644	666	643	666	0.96
12	22	7e-05	0.0059	17.4	1.7	2	23	854	876	853	876	0.96
13	22	5.5e-05	0.0046	17.7	1.6	2	23	906	928	905	928	0.96
14	22	0.023	1.9	9.5	3.6	2	23	934	955	934	956	0.94
15	22	3.9	3.3e+02	2.5	0.8	11	23	1302	1314	1302	1314	0.91
16	22	0.00024	0.02	15.7	0.1	1	23	1325	1347	1325	1347	0.98
17	22	9.5e-05	0.008	17.0	2.7	1	23	1353	1375	1353	1375	0.98
18	22	2.1e-05	0.0018	19.0	2.5	1	23	1409	1431	1409	1431	0.97
19	22	0.0062	0.52	11.3	0.6	2	23	1438	1459	1437	1459	0.97
20	22	7.9e-05	0.0066	17.2	1.0	1	23	1464	1486	1464	1486	0.98
21	22	4.2e-05	0.0035	18.1	2.9	1	23	1491	1513	1491	1513	0.97
22	22	5.3e-05	0.0045	17.8	0.4	1	23	1518	1541	1518	1541	0.98

Sequence Information

Coding Sequence: ATGTTCAATTTAAGTGATATTGAGTTAACTAAATTGTGTAGAACATGTTTATCAATTGGAGAAATGAAGTCACTGTTCGAGAAAAGTGCAACTGAACCAGATTTAGCTGAAATGTTAATGACATGTACACCAGTAGAGTATTACGCCAACAATGGTCTACCGGAACAAGTGTGTCAGGATTGTTTTAATGAAATAAGTCGATCTTACAAATTTGCGATAAAATGCCGCCAAACCGATGACAAACTGCAGGTATATTTACAAAACCTTGTAAAATTAAAAACTTCACTTATTTGCCATACTTCATCATCTAAACCAATAAAACCGGATATAAAAAACAAATCGGATAATCCACCAAATAGTAATTCAGAAACTGATATTAATAATCAAAGCGCAGGTTTAAACCTGCCCAAGTTAAATATTGATAATGTGTATTCGCTATCTAACGCATTATCAACCTCTGAAATACAAAAGGAGCTAAACCAAGAGCTGGATATTTGTAAACATGAAATTGATTTAGAGGAAATGAGTAATATTGAAAACGTTAATTTGCCATCAGAGGAAAATGATTTGTTGCTAACAGATGTTAGATCTGAGGTTGAGTCTAATCTAGTAGATGTTAGCTGGTTAAAAACAGAGATAATTGATGACGATGTTTTAATAAATGAAATAAAAATTGAAATTAAAATTGAACCGGATGATAGTATTGCCTCAACTATAGATCCACTTGATTATTGTTGCTCGCCGGACTTCGATCAGAACAATGACATAAAAACTGAGGAAGTAATATCTGATTTCCGGGCCAAGCCTCTAATACCATTTACGCATTCAAATCCTGTGGTGGTGTTAGAGCGATTAAATGAAAATAGTTTATTAGCAAGTCCCCAATGTGATGATTCGCGGGAAGAAACTGAATTAAACAGTTCGGGATCTTCTGTGATCACGCGTCATTTAGCCGACCGCGTGAAACATCGAGCTCATCCATGCCCGATGTGTGAGAAATCATTTTTCCGCCCATATGAATTAAAACGTCATATTAAAAATCATAATCGAGAGATTTACGCGTGTAAGATTTGCAAACGGCAATTTAATGATAAAGCCAATTTGGTGTGGCACGCGCGGTCCCACCCGCAAGTGTGTCCGATTTGCAATAAAACATATCGTAATTACAATCATTTACAACGGCACAAATTGATTCATACGAAACAAGAGTACGTGTCATGTCAATATTGCAACAAAACGTATAGAACAATACGAGCGTTAGAGTTACATGTGCTAGTTGAGCATAATGAGAAGGACAATGAAATGGTTCGGGTATCTTGCCAATTTTGCAACAAAAAGTTTGCGCGTGCCCACGTCTTAAAACAGCATATTTCACTGATGCACACCGACCCAATTGATGCGAACTTGTCTGAATCAACGTTTGATGACATATTAGATTTAAAACAGGATAGACAGATGTCCAACAGTTATAAGAAATATGAATGCAATATTTGCAAGAAATATTTTTCGAAATATTACATAAAGAACCATATGCTTACGCATGCAAACGATAAAGTGCATACTTGCCCGATTTGCAAGGAAACATTTACGAAATTCTATAAACTAAAGCGTCATTACAGCTCGCATAGAATCAAAAAGGTAGTAAAAAGGGAATTAGGCAAGACTGAAGAAAAACAATATTCATGTAGAGTTTGTGTATTGTATTATAATACAATAACAGATTTAAATGATCATATGCTTCAACATACTGATAAAATATCGAAATGTTTGATATGCGATAAGGAGTTTATTGACAGTATACTGTTAATGAAACATATGTTGATACACCAGAATGATACAAATTTGTCTTGTACCATTTGCAAACGAACTTTTAGAACTAATTATCACTTACGAGTGCATGAACCAGTGCACGACGCTCCAAAACCACTCCCATGTGGCATTTGTTCCAAAGTATACCCGCACAACCGCTCGTTGCGTGACCATCAACGTAAGATCCACGGTTACAGACGTGCGAATCGCGACCAACAAAAACCCGATAATGCCCGCCAAAGTGAGCATCACACACCAAATGTAGCATCGAATAGCGATGAAGCGTCTGACTTACGAAAACGTCCGAATCGCGTCAATCAAACACCCGATACCCAAATTATAGAATCGAATGCCGATGAAGCGTATGAATTACGAAAACGACCGAATCGCGTCAATCAAACACCCGATACCCAAATTATAGAATCGAATGCCGATGAAGCGTATGAATTACGAAAACGTCCGAATCGCGTCAATCAAACACCCGATACCCAAATTATAGAATCGAATGCCGATGAAGCGTATGAATTACGAAAACGTCCGAATCGCGTCAATCAAACACCCGATACCCAAATTATAGAATCGAATGCCGATGAAACGTATGAATTACGAAAACGAAGTCCCGTTAAAACATCATATATTGATGACGACCCAAATGACACAGATTGTGACAGTGAATCATCAATCGATCAAATTGCACCGTTAGCAATAGAAAATGGTGGCAAACCATCTAAAAGTAAATCTATGCCCATTCGATGCAGTATTTGCAAGAAAACGTTTAAGGCAAATCAGTATTTAAGACTTCACATGAGGTATTCCCATTGTGACCGTGTATCATCAATCGATCGAATTACACCGTTAGTTAAAGAAAATGGCGGTATACCATCTACAAGTACATCTATGCCCATTCGATGTGGTATTTGCAAGAAAACGTTTAAGGCAAATCAGTATTTAAGACAACATATGAGGTATACCCATTTAGGGGAAAAACCTACTTGTTTGACGTGCCAGGCAGTTTTCAAAAGCGTCTATTTTTTAAAACGCCATCGACGCCAACACCATTCTAACAACCAGTTAACAAATACAAATAACGCATTAGATCAAAGTGAAGCGTCTAAAAAAAGTGAACCGAAGGATTTGGATAATCTAGAATTAAATAATGAGAACAGCCAAAATACACATTCAAGTGATACATTCAGCACTAAAGAATCAACAGAGTCGGAAAACAACCAACGTATAAACAATGATTCAAAATGGAGACGTGAACTAGCCATTACTGAAGCATTTATAAGTGTACTATCAAAGCCAAACATTGAAAACTACCAATCTGTGAATAAGTACAGTCGAGATGAAATTCCAAATAATGATTCAAATAGTACTGAAAACTACCACTCTGATACTGAAAACTATCGATATAGAATACCAATTAGTAATACAAACTATCAACAAGGACAATCTAGCTCAGATTACCAAAGTGAACTATCAAAACCTGAACCTCGCCGATTTAATAATGAAAACTATCGAAATGAAATTTCAAATATTGATTTTGAATGTCGCAATGGACAAAATCACGGATTTGATAGTGAGAACTATCGAAATGAACTCAGAAGTATTGATGCTGAATATCGGAATGCAGAATGCAGTACTGAACTATTAAATCCACAAAACTATCAATCTGATGAGGATTGTGAAAATGAGCTGTCAATGAATGGTACCGAATATGTGCGTAATACTGACAGTGAACTATCAATGCCCGGGGAATATCAGAAACTGTTAAAGTCGATGGAGTATCAGAATCAGACTGAAGATTGCGATAGTGACATTTCAAATGATCAAAGTGATCGGTGTAGTGCTGAAGATGACGACGGTCAAAGTGACATTATAAATGTTGAAAATAGTAGAGATGGTGATGAATCAAAGGTTAAGGATAATCAGAATCAGGGTATAGATTTCTATGAACCAGCGAGTAATGAAGATTATAAAAAATATGGATTACGAAAACGTGTATCGCAAATACAGTCGTATACTGAAGTAAGTGATGAAGAGTTGGAGGAGTGCAGAGATAGAAAGAGGAGAAAATTAAATGTGGAAATAATGTCAAATAATGCTAGTTTAAAACGTCATTTGAATAGTCATCGTACTAAATTTAAATCAGCAGCAATACGTTACAGTTGTGAAGTATGTGAGCATCCGTTTCGAAGAGTCGCTGATTTAGAAGCTCACCAGAGTGTGCATTTAGGGCCTCAACCGTTTACGTGTACATTTTGTGATGTGCGATTTGTGCGTCTATCCGAGTTAAAACTTCATATGCATTCGCATGATGATGACAGACAGTACGCATGTGCGTTTTGTGCGCGTAGGTATAAAGCGAAAGCAATATTAAGGCGGCATGAAGAGTGCCATAACCGTTCGTATAACTATGAATGTGAAGTATGCAACAAACAGTTTTGCAATAAAAGCCGCTTACAAACACACATGGGCATTCATACCAGAAAACAATCAATGTCATGTTCTATCTGCGAGGAACAATTCCCGAGTCCGTACACCTTACAGTGCCACATGAATATCCATAATGGACGCATGTACACTTGCGTGATATGTAAACATGAATTTGCCACAAAAGCAAACCTTAGCTCGCATATGATTAATCATTCTGGTTTAACGTTTGATTGTACGATTTGCTTTAAGAATTTTAAAACGCCTAAGTACTTAAAGAGCCACTTAAAATCCCATTCCGCCAAAATATTTAAATGTACATTATGTGATGAAGCGTTTACAATGGAACAAGCTTTACTAACACATATGCGAAAAATGCATTGA
Protein Sequence: MFNLSDIELTKLCRTCLSIGEMKSLFEKSATEPDLAEMLMTCTPVEYYANNGLPEQVCQDCFNEISRSYKFAIKCRQTDDKLQVYLQNLVKLKTSLICHTSSSKPIKPDIKNKSDNPPNSNSETDINNQSAGLNLPKLNIDNVYSLSNALSTSEIQKELNQELDICKHEIDLEEMSNIENVNLPSEENDLLLTDVRSEVESNLVDVSWLKTEIIDDDVLINEIKIEIKIEPDDSIASTIDPLDYCCSPDFDQNNDIKTEEVISDFRAKPLIPFTHSNPVVVLERLNENSLLASPQCDDSREETELNSSGSSVITRHLADRVKHRAHPCPMCEKSFFRPYELKRHIKNHNREIYACKICKRQFNDKANLVWHARSHPQVCPICNKTYRNYNHLQRHKLIHTKQEYVSCQYCNKTYRTIRALELHVLVEHNEKDNEMVRVSCQFCNKKFARAHVLKQHISLMHTDPIDANLSESTFDDILDLKQDRQMSNSYKKYECNICKKYFSKYYIKNHMLTHANDKVHTCPICKETFTKFYKLKRHYSSHRIKKVVKRELGKTEEKQYSCRVCVLYYNTITDLNDHMLQHTDKISKCLICDKEFIDSILLMKHMLIHQNDTNLSCTICKRTFRTNYHLRVHEPVHDAPKPLPCGICSKVYPHNRSLRDHQRKIHGYRRANRDQQKPDNARQSEHHTPNVASNSDEASDLRKRPNRVNQTPDTQIIESNADEAYELRKRPNRVNQTPDTQIIESNADEAYELRKRPNRVNQTPDTQIIESNADEAYELRKRPNRVNQTPDTQIIESNADETYELRKRSPVKTSYIDDDPNDTDCDSESSIDQIAPLAIENGGKPSKSKSMPIRCSICKKTFKANQYLRLHMRYSHCDRVSSIDRITPLVKENGGIPSTSTSMPIRCGICKKTFKANQYLRQHMRYTHLGEKPTCLTCQAVFKSVYFLKRHRRQHHSNNQLTNTNNALDQSEASKKSEPKDLDNLELNNENSQNTHSSDTFSTKESTESENNQRINNDSKWRRELAITEAFISVLSKPNIENYQSVNKYSRDEIPNNDSNSTENYHSDTENYRYRIPISNTNYQQGQSSSDYQSELSKPEPRRFNNENYRNEISNIDFECRNGQNHGFDSENYRNELRSIDAEYRNAECSTELLNPQNYQSDEDCENELSMNGTEYVRNTDSELSMPGEYQKLLKSMEYQNQTEDCDSDISNDQSDRCSAEDDDGQSDIINVENSRDGDESKVKDNQNQGIDFYEPASNEDYKKYGLRKRVSQIQSYTEVSDEELEECRDRKRRKLNVEIMSNNASLKRHLNSHRTKFKSAAIRYSCEVCEHPFRRVADLEAHQSVHLGPQPFTCTFCDVRFVRLSELKLHMHSHDDDRQYACAFCARRYKAKAILRRHEECHNRSYNYECEVCNKQFCNKSRLQTHMGIHTRKQSMSCSICEEQFPSPYTLQCHMNIHNGRMYTCVICKHEFATKANLSSHMINHSGLTFDCTICFKNFKTPKYLKSHLKSHSAKIFKCTLCDEAFTMEQALLTHMRKMH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -