Lspi012892.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leistus spinibarbis
Gene Symbol
-
Assembly
GCA_933228875.1
Location
CAKOGB010000307.1:20108-27624[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.0065 0.54 11.2 0.1 1 23 420 442 420 442 0.98
2 22 3.3e-06 0.00027 21.6 2.5 1 23 448 470 448 470 0.98
3 22 0.0023 0.19 12.6 2.9 1 23 552 574 552 574 0.97
4 22 5.3e-05 0.0045 17.8 1.8 1 23 580 602 580 602 0.98
5 22 3.4e-05 0.0029 18.4 2.0 1 23 608 630 608 630 0.97
6 22 0.0011 0.089 13.7 7.8 1 23 636 658 636 658 0.99
7 22 1.3e-05 0.0011 19.7 1.8 1 23 665 687 665 687 0.98
8 22 1.3e-06 0.00011 22.9 1.2 1 23 693 715 693 715 0.98
9 22 2.2e-06 0.00019 22.1 1.0 1 23 721 743 721 743 0.98
10 22 0.00067 0.056 14.3 4.1 1 23 749 771 749 771 0.98
11 22 0.003 0.25 12.3 0.7 1 17 774 790 774 791 0.94
12 22 0.00049 0.041 14.8 2.3 1 23 1005 1027 1005 1027 0.99
13 22 2.4 2e+02 3.1 0.4 11 23 1036 1048 1029 1048 0.87
14 22 1e-06 8.5e-05 23.2 2.2 1 23 1346 1368 1346 1368 0.98
15 22 8.2e-06 0.00069 20.3 4.5 1 23 1375 1397 1375 1397 0.97
16 22 1.4e-05 0.0012 19.6 0.2 1 23 1403 1425 1403 1425 0.98
17 22 3.5e-06 0.00029 21.5 2.3 1 23 1431 1453 1431 1453 0.98
18 22 1.6e-06 0.00014 22.6 0.5 1 23 1459 1481 1459 1481 0.99
19 22 1.7e-05 0.0015 19.3 1.1 1 23 1487 1509 1487 1509 0.97
20 22 2.9e-06 0.00024 21.7 0.8 1 23 1515 1537 1515 1537 0.99
21 22 7.1e-05 0.0059 17.4 4.3 1 23 1543 1565 1543 1565 0.99
22 22 1.8e-05 0.0015 19.3 1.4 1 23 1571 1593 1571 1593 0.96

Sequence Information

Coding Sequence
ATGTTACGGAATCCAAACGTCTTCAAACCTTATTTTTTCTTATCCTATAATCTATCGATGTTTACCAGCTGTGAGGTTACGTTACGTTATTGCTGTGGAGAAAAAGGTAGTAAGTTAGCTATCCGGATATGGCACGGGTATGCGGCGGAGAGTGCACACCAAGATATAACGTTGGTGGCGGTCGGATACCTGGATATGACGCGGATATACGGAGGAGAATATGCTAAGAAATTCCCATTAAATCAGTTATTGTCTGTCAAAAAGTTACTGGGAGCGAGTTGCTGGGAACGGGTTGGTCGGGTGCGAGTTGGCCGGGAGCGAGTTACTGGGATCCAGTTGCGCGGGAGCGAGTTACTGGGAGCCAGTTGCGCGGGAGCGAGTTACCGGGAGCGAGTTACTGGGAGCCAGTTGCGCGGGAGCGACTTGGCATGGGATCCAGTTGGTGGGAGCGAGTTGCGCGGAAGCGAGTTGGTCGGGAGCCAGTTGTCCGGGGGCGAGTTGGTGGGGAGTGAGTTACTGGGAGCCAGTTGTGCGGAAGCGAGTTGGCATGGGAGCCAGTTGTCCGGGTACCAGTTGAGCGAAAGCGAGTTGGTGGGAATATCTTACAACTACTTCTGTCAGTTTAAAATGTCGATTTTAAAAGAAATAGAATTTAATAAAGTGTGCAGAACATGTTTGTCATCATCCGAAGATATGAAATCATTGTATGCGACCGATTCCGGCTTAACACATGTATGCTGTGCAGAAATGTTAATGTCTTTCACACCATTAAAATTGTCATTAAATGATGGTTTTCCAACCCAAATTTGCAGTATTTGCATTAGCGAGCTAAACCACTTCCATACGTTTCAATTAAAATGTTTACAATCTGAGAACACATTACGAAATTGTAAAGACAAAATTGTCCATACGGAAAAGACATGTAATTTCGAGGAGGTGATAATAAAAAAAGAGTTGCCCATATATACAGACATTATTAACGAATTCAAAGAAAACTCAATTGATCAAAGTTGTGCAACAAGCAAATCACTACAAGATCCATTAACAATTGCCGAAACTCAAAAGGAATCAAAAGGCCAAGAATTAGACTTGATAAAACATGAATTTATTGACATTGAGATTGAAAAGGAAGACGTTATAAAAACAGCCGTTAATAAAGGTACGGCGAAAATTCCAGAAACGAATGTCGACTTCCTGTCTACAACTCGTGTCAAGTCGTTGGTTGAAATTTACAAATTTGCGATTGGAGAAAAGCCATATACATGTACAGTATGTGGCAGTATCTATGCAGATGAGAAATCTTTAGCGCTACATAAAATAACGCACTTGAAAGAGAAGCCATATCCATGTACGAAGTGTAGTAAATCATACACACGAAACACAAGTTTGTTGCGTCACTTACGATCGCATAATGATGAAAGTTCAAGTATTGAAATCGGCCAAAGTTGTGCAACAACAACATCGCTACAAGATCCATTAACAATTGCCGAAATTAAAAACGATTTGGGCCAAGAATTAGACATAAAGCATGAATTCATTGACGTCAAGATTGAAAATGAACACGACATAAACAGTAGCTCTAACAGTCCGCTAGTTCATCTATTAGAGGAAACTTCAACACATAGTTCATTGAATGAAacaagtgaaaggccatatgcatgtacaatatgtgatagaggcttcaaaaataaaaggtatttaaattgtcatttagatacgcatagtggaaagaagccatatacgtgtacggtgtgtaataattcatttacaagaaagctcagtttgaaatatcatatgttaattcatactggagaaaaaccatatgcatgtacattctgtgataaatgtttcgctctgaagggtcaattaacagtacatttgcgcaatcatactggggagaagccatatacgtgtactatttgcaacagttcgtttcatcaaaaatgcacattaactaaacatttacgaacgcatactggtggcaaaaagaaatattcgtgtagatattgtaataaggcgtttgaaagctggcacctactaaatgtacatttgagtacgcacgccggagagaagctatatccgtgtagcgagtgtaacaaattatttacaacaaagagctatttaaaaagtcatatgctaattcacactggagagaaacgatatgcgtgtgctttttgtgttaagagtttcacgcaaaagagtcaattaacaattcatttgcgaacgcacactggagagaggccgtatacgtgtgccatttgcaaccattcgttcaagcacacggggacattaacgacacatttacaattgcattcgaaatattcgtgtactttttgtgataagagttttgctagatcgtatctgttgaagATATCTTACAACTGCTTCTGTCAGTTTAAAATGTCGAATTTAAAAGAAATAGAATTTAATAAAGTGTGTAGAACATGTTTGTCATCTTCCGAAGATATGAAATCATTGTATGCGACCGATTCTGGTTTAACGTATGTGTGTTTTGCGGATATGTTGATGTCTTTCACACCATTAAAATTGTCAAATAATGATGGGTTTCCAACCCAAATTTGTTGTATTTGCATTAGCGAGCTAAGCCAGTTTCATACATTTCAATTAAAATGTATACAATCAGAGAACATATTACAAAATTGCAAAGAGAACATTGTCCATACGGAGGAGACAAATGATTCTGAGCAGTTGTTAATAAAGATGGAGTTGCCCACCTATACAGACAATATAAACTCAACTGTTCAAAGTTATGCAACAACCAAATCATTACAAGATCCATTAACAATTTCCACAGGCCAAAAAGAAACAAGCCAAGAATTAGACTTGATAAAACCTGAATTTGTTAATATTAAGATTGAAATGGAAGATGTTATAAACACACCCGTTACTCAAGAACCGGCTAAATTTCCAGAAATTCATGTCAAGTCCCTGTCTACAACTCGTGTCAAATCATTGAAAGAAATGAATAAATTAGCGATTGGACAAAAGCTATATACATGTACAGTATGCGACAGTATGTTTGCAGATGCGAAATGTTTAATGACTCATAAGAGAACGCACATCTGCGAGAAGCCATATTCGGGGACTCAAAACATACATTTGTTTCGTCACACACGATCGCATAATGAAAAAAGTTCAAGTGGCAGCGACAGTTCACTTGGTTCTGATTTTGAAAACAAACAAAGTTGTGCAGCCACAACATCGCTACAAGATCCATTAACAATTGCCGAAGTCAATAAAGAATTGAGCCAACAATTAGACTTGATAAAGCATGAATTAATTGACGTCAAGATTGACAATAAACACGATATAAACATTAAGTCCAATAGTTCACTAGTGAATCTATCAGAAGAAACTACAACACATAGTTTATTGAATGAAACAAAAAGTATGAAATCATTGTATGAGACCGATTCCGGCTTAACACATGTATGCTGTGCAGAAATGTTAATGTCTTTCACACCATTAAAATTGTCATTAAATGACGGTTTTCCAACCCAAATTTGTTGTATTTGCATTAGCGAGCTAAACCACTTCCATACCTTCCAATCAAAATGTATGCAATCAGAGAACGTATTACGAAATTGCAAAGATAAAATAATTCATACGGAAAAAACAAATAATTTCGCGGAGGTGTTAATAAAACGAGAATTACCCGTATATTCAGACAATATAAACGATTTCGAAGAAAAGTCCAGTAACGCAAGCGACAGTTCATATTGTTCTGATACAACAACAAAATCGCTACAAGATCCATTAACAATTGCCGAAACCCAAAAAGATATAAACCAAGAATTGGACTTAATAAAACAGGAATTTGTTGACATAAAGATTGAAAAGGAAGACGATACAAACACACCTGTTAATCAAGAAACAGCTAAAATGCCAGAAATTGCTGTCGAATCACCAGTTTGTGTTGTTAAGTCGTTGGATGAAATGAACAAATTAGTAATTGTAGAGAAAAAGCCATCAAAAGCGTCTcatatgaaaaaacacgcaggagagaaatcgttatattcgtgtacaaagtgtagtaaatcgttcactcgaaacataaatttattgcgccacatacaatcgcataatgaagaaacaattgtacaccattgtacaatctgcgacaaatcgtttaaaaccaacgaattattaactgtacatgttcgaaaacatagcggagaaaagccatatgcgtgtaatatatgtggcaattcgtataatcggcgtaacgcgttaacaatacatatacgatcgcatactggagagaagccatttgcttgtacagtgtgtcagtattcattccgtaagaagcaacagttaacggaccacatgcgtacgcacacaggagagaaaccatatacgtgtacagtatgcgagcggccgtttagtcttaaagtgaacttagctaaacacatgagaatgcatacgggggaaaaatcgtttgcttgtactgtttgtgatcgcttttattatcaaaaggaactgttaacaattcatatgcgaaagcatacgggagagaaaccatatacgtgtaccatttgtggtgtttcgtttaatcaaaagggcactttaacggatcattataaaatgcatagtggagaaaaaccatattcgtgtacagtatgtagtaattcgtttaggaaaaagcaacatttaactgatcatatacggacgcatacgggtgagaagccctatttatgtactatttgcggtaattctttcactttaaagaaaaccttaacagtgcatatgaggaaacatacgagagagaatgcatcttcggcaatataA
Protein Sequence
MLRNPNVFKPYFFLSYNLSMFTSCEVTLRYCCGEKGSKLAIRIWHGYAAESAHQDITLVAVGYLDMTRIYGGEYAKKFPLNQLLSVKKLLGASCWERVGRVRVGRERVTGIQLRGSELLGASCAGASYRERVTGSQLRGSDLAWDPVGGSELRGSELVGSQLSGGELVGSELLGASCAEASWHGSQLSGYQLSESELVGISYNYFCQFKMSILKEIEFNKVCRTCLSSSEDMKSLYATDSGLTHVCCAEMLMSFTPLKLSLNDGFPTQICSICISELNHFHTFQLKCLQSENTLRNCKDKIVHTEKTCNFEEVIIKKELPIYTDIINEFKENSIDQSCATSKSLQDPLTIAETQKESKGQELDLIKHEFIDIEIEKEDVIKTAVNKGTAKIPETNVDFLSTTRVKSLVEIYKFAIGEKPYTCTVCGSIYADEKSLALHKITHLKEKPYPCTKCSKSYTRNTSLLRHLRSHNDESSSIEIGQSCATTTSLQDPLTIAEIKNDLGQELDIKHEFIDVKIENEHDINSSSNSPLVHLLEETSTHSSLNETSERPYACTICDRGFKNKRYLNCHLDTHSGKKPYTCTVCNNSFTRKLSLKYHMLIHTGEKPYACTFCDKCFALKGQLTVHLRNHTGEKPYTCTICNSSFHQKCTLTKHLRTHTGGKKKYSCRYCNKAFESWHLLNVHLSTHAGEKLYPCSECNKLFTTKSYLKSHMLIHTGEKRYACAFCVKSFTQKSQLTIHLRTHTGERPYTCAICNHSFKHTGTLTTHLQLHSKYSCTFCDKSFARSYLLKISYNCFCQFKMSNLKEIEFNKVCRTCLSSSEDMKSLYATDSGLTYVCFADMLMSFTPLKLSNNDGFPTQICCICISELSQFHTFQLKCIQSENILQNCKENIVHTEETNDSEQLLIKMELPTYTDNINSTVQSYATTKSLQDPLTISTGQKETSQELDLIKPEFVNIKIEMEDVINTPVTQEPAKFPEIHVKSLSTTRVKSLKEMNKLAIGQKLYTCTVCDSMFADAKCLMTHKRTHICEKPYSGTQNIHLFRHTRSHNEKSSSGSDSSLGSDFENKQSCAATTSLQDPLTIAEVNKELSQQLDLIKHELIDVKIDNKHDINIKSNSSLVNLSEETTTHSLLNETKSMKSLYETDSGLTHVCCAEMLMSFTPLKLSLNDGFPTQICCICISELNHFHTFQSKCMQSENVLRNCKDKIIHTEKTNNFAEVLIKRELPVYSDNINDFEEKSSNASDSSYCSDTTTKSLQDPLTIAETQKDINQELDLIKQEFVDIKIEKEDDTNTPVNQETAKMPEIAVESPVCVVKSLDEMNKLVIVEKKPSKASHMKKHAGEKSLYSCTKCSKSFTRNINLLRHIQSHNEETIVHHCTICDKSFKTNELLTVHVRKHSGEKPYACNICGNSYNRRNALTIHIRSHTGEKPFACTVCQYSFRKKQQLTDHMRTHTGEKPYTCTVCERPFSLKVNLAKHMRMHTGEKSFACTVCDRFYYQKELLTIHMRKHTGEKPYTCTICGVSFNQKGTLTDHYKMHSGEKPYSCTVCSNSFRKKQHLTDHIRTHTGEKPYLCTICGNSFTLKKTLTVHMRKHTRENASSAI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-