Lspi002196.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leistus spinibarbis
Gene Symbol
ZNF236
Assembly
GCA_933228875.1
Location
CAKOGB010000035.1:751408-761455[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 3.2e-05 0.0027 18.5 3.1 1 23 143 165 143 165 0.98
2 25 0.0014 0.12 13.3 0.3 1 23 171 193 171 193 0.98
3 25 4.2e-07 3.5e-05 24.4 0.5 2 23 199 220 199 220 0.97
4 25 0.0022 0.18 12.7 0.3 1 23 226 248 226 248 0.97
5 25 0.0005 0.042 14.7 0.7 2 23 260 281 259 281 0.95
6 25 0.00059 0.05 14.5 4.4 1 23 308 330 308 330 0.98
7 25 6.1e-07 5.1e-05 23.9 0.6 1 23 336 358 336 358 0.98
8 25 4.3e-05 0.0036 18.1 0.6 1 23 364 387 364 387 0.96
9 25 0.0018 0.15 12.9 1.3 1 23 397 420 397 420 0.97
10 25 2.7e-06 0.00022 21.9 1.2 1 23 503 525 503 525 0.97
11 25 9e-06 0.00076 20.2 1.1 1 23 531 553 531 553 0.99
12 25 2.3e-06 0.00019 22.1 1.8 2 23 560 581 559 581 0.97
13 25 0.00086 0.072 14.0 1.5 1 23 587 609 587 609 0.98
14 25 0.0011 0.095 13.6 4.1 1 23 661 683 661 683 0.98
15 25 0.00067 0.056 14.3 2.3 1 23 689 711 689 711 0.99
16 25 3.5e-05 0.003 18.3 0.8 1 23 717 739 717 739 0.97
17 25 0.12 9.7 7.3 3.8 1 23 745 767 745 767 0.95
18 25 0.0023 0.19 12.6 3.7 3 23 1065 1085 1063 1085 0.96
19 25 2.3e-07 1.9e-05 25.2 1.9 2 23 1140 1161 1139 1161 0.98
20 25 5.8e-06 0.00048 20.8 0.8 1 23 1167 1189 1167 1189 0.99
21 25 0.00012 0.0099 16.7 0.1 1 23 1195 1217 1195 1217 0.97
22 25 0.035 3 8.9 6.7 1 23 1223 1245 1223 1245 0.98
23 25 8e-05 0.0067 17.2 0.4 3 23 1387 1407 1386 1407 0.97
24 25 2.7e-05 0.0023 18.7 4.6 1 23 1413 1435 1413 1435 0.96
25 25 3.4e-06 0.00028 21.6 0.7 1 23 1441 1464 1441 1464 0.97

Sequence Information

Coding Sequence
ATGAGCAACAATGAAACGTTTCCATTGTTACAAAACAATACAAATGAAACGGTTACGTTAATCGCTTTGCCCCTTCAAATATTTCAACAAGGAACGCAGCAACAGAACGTGATTGGAAATCGGCAAATATTGTTTAAATCACTACCTGATGGATCGATTATTATCGATACGAACCAGTTTTATAATGAAACTGCTCCAATTGACTGTCCAGAAATGGAGCAAAATCCTGAAAAACCAACCGATTTGATTGGAAAAGCGATTGCGGCGATCGAAGATAAACATGAAGAATCTATGAATACTGAGACAATTCCTAAAAATAAACAAAGAGTACGGTATTTGAACAATAAAACAAGGCAAAATAGTCGAAATTCGACACGGAGCCGAAAAGATGGGAATAAACCGGAAATTACCGAAAAAACTGGTCCATTTAAATGCAAATTTTGCGATAAAGAATTTCGGAAGTGGAATTTATTAAATAGACATGAAAAAAATCATATGAACGAGAGCAAATTTAAATGTCCTACTTGTACAGCATCGTTTAATATTCTTtcgaattttttattacacttggctACACATAACACAAGCGACCCCACATGTCCAGAATGTGGGAAAAAATTTACAAGAAATGCCAGTTTAAAAGCACATTTAATGTACCATGAAAAAGAAGAAACATTCTACTGTGAAGAATGCGATATGTCTTTCCAAAATGAGATGGAAATGGAAACACATTTAAAAGGACATGGAAAAATACGAAAAGTGGACGGAGATTCTCTACAGTGTAGATATTGTCAATTGACATTCGACGTGCAGTCGGAATTGAAGAAACATGTCAGCGAGCATAATAAAGTAAGGATGAAAAGTCTTTTACAAGTGCCTAGACGTAAAATACAACGAAAAGTCGTGCCGATCGAACGCAAACACCAGTGCAAAATATGTTTAAAAGCTTTTCAAAAACATAGCCAAATCGAACGGCACATGCGCGTTCACAGCGGCGAGAAACCGTATGAGTGTAAAGAATGCGATAGGGGTTTTAGTCAAAAAGGATCATTGCAGATCCATATGACCCGACACACTGGAATTAAACCACACAAGTGTGCTTTATGTCCAGCGAAATTTAGCCAAAAAGGAAATCTGCGGGCGCATATCGCAAAAACGCACTCGGTGCCCGCTGGCGGCGCGAACGTTTTCTCTTGTTCAGAGTGCGCATGCGTATTCACTCGTTTAGGTAGCCTAAACGGTCACATGACCCGCAACCACCCGAAACAAAAGGAAAGCGATATAAAAGCGGTAATGTCCCAATTAGCCGCAATGCAAAACCACATGACTATCGCCGACGATATTTTGCAACAAGCAATGGCTCGGTCGGATTTACCCCAGTTGCAAAATGTGGACGATAAGCCTGATTGCCCGATTGCGACGTATGTGACCCTCGCAGATTTAGGAATTGATGGGACAATGCGCAGATATATAATTAAATTGAGGATCGCAGGGGATATTCGATGGCATATGTGCTCGTTTTGCCCCAAGGAATTCAAAAAACCGTCGGATTTGGTGCGACATATTAGGGTTCATACACGGGAAAAGCCGTATAAATGTAAAGTATGTTCGCGTTCATTTGCGGTAAAATCTACGTTAACTAGTCACGTAAAAATTCATAGAAAAGTGAAAAAAATACAATGTAAACATTGCCCGAAATATTTTAGTTCTTGGAGCAGTTTAAATGTACATGCAAGGAAGCACACAGGTACTAAACCATACAAATGTTCGGTTTGTGCAAAGACATTTCGCACCACTTTACTATTACAGCAACATTTCCAAATTCATTTAACCAGCGCTAAAGACACTTTATACTCGAAAGATCCAAACAGCGAAATAATTATGCAACAACCTATTTATATTAGCAGTAAAGGTCTACAATCAGTTGGCGTTCCGTTACGAAAACGGCCATTAGTCGAAGCAGGCGCCAAAAATCGCCCCTATACTTGTTTAATTTGCAACGCAGGTTTTCGTAAACTAAGCCATTTGAAACAACACCATATCCGACACACGGGCGAACGCCCATTTCGTTGTCACTTATGTTTGCGCAGTTTTTCATCAACCGGCGTCTTAAAATCGCATATTTTAACCCACAGCGGCGCAAAACCGTACACTTGCGTCTTATGCGACAAAAACTTCGCAACCAACGGAAGTCTACGCCGCCATTTTGAATCGCACAGTACAGTGCGGCCATTTTTATGCCCCTACTGTTACAAAGACTTTAAAACGGTACTCAGTTGCCGCAAACATATGAAAATCCACAAATTAGAACTCACCCTACAATTGCAAGCGAGTAAAGATTGTGGATTTACAACACCAGATTTGGTGCAACCGAAACCAAACGAATTACCGTTTCCGCCCGATTTAACCGATCCGTTAAACGAACCGTTCATTTTGGTTAATCATGATTTGATTAACAATGACGAACTGGTTGATGATCCAGTTGAAGCGGAAATGGTTACGCAAACTTTACGCGCTGACAAAACGGGAACGGTTGTACTTCCGGTTATTGCGAATCAAGAGAATTTAACGCAAGAAAATATGCAGGAGATTGAAGATACGTTGAATAGTCAAATGTTGAATATAATCGGGGATGAGAATTATATTAATTCGCCGTATTTAAAGAAGATTAGTGCGGATGAACCGATTGCCAGTACGGATGAACTAGTTAGTACGTTAACTGAAAATAGTGGGAAAACGATTGATGATAACGCGTATTTGTACCAACATGTGATTGTGAATTTAAATTCGGAAGCGGAGCAAATGTTCGATAATGTTGGGATTGATAATATTTTGTCGCAAGTTAAATTACAGAATGATTCGTTATTCTTAACCGATTTAAACTCAATAAATATAAACGAATCCAACAACATATTATCGTATCAAATCGCAGAACAAACCGATTTACAACAAAATCAAATGCTATTACAAATCGAACCACCAATTGACCAAACAATCAATATAGACGAATCAATTAATTTAGAGGAATCGATAAATTTAGAGCCAAATCTACAAATAAAATTACAAGCGATGGGAGACTTTTTAAATGCGCAACCCGAGCAAAATATTCTAGCGGAATCGGCGCAATTCCTGACACAAACTCAAACTCTAGAAAAAGAACAAGAAGAAGAAATCGGAACAGATTCTATGATATGTAATTTGTGTAAATTAAATTTCAAAAATAAAAGCGATTTAAAATTACATCGTTGTTTGCATTTTGTCGATGTAAATGTGAATCCGAGAAACGAGAACGAATTGGCTGAATCGTTTACTTTGCCGGCGGCGGAAGTCGTttttgatttcggcaattcggttgatactgatcaagttgagGAATCCGTCGATGTGTCCCCGAATAATGTACCAGTTTACCGAAACCAGTGCACTTTTTGCCCGAAAACATTCCGCAAACCGTCCGATTTGCAACGCCATTTAAGAACGCATACCGGGGAACGTCCGTTCAAATGTAATGAATGCGCGAAAAGTTTTTCGCTAAAATCGACGTTGGAGTCGCACGTTCGCGTTCATCAAGACCGAAAAAGTTTCGCCTGTAATGTTTGTGGTTCGTTATTCGCGTCAAAGGGAAGTTTGAACGTACATATGCGACTCCATACAGGTGCTAAACCGTATAAATGCTGTTTATGCCATTTACGTTTCCGTACGTCGGGGCACCGTAAGGCCCATTTAGCTGTACATTATAAAGAAGCTGCAAAAACCGGTAAATTACCGCATCAAATCTCAACGCGCAAAGCAAAAATGTCTGTACTTATGGACGGAGTCCAAAGCCTTATCGGCGACTTAAACCCGAAAGACCTCGACGATAAGGACCCAGATGGGCAACTAGAAGAGTTACCATTAACCGAAAACCATGTTAAATCGTACGAAAACATTGTACTAAACACTCAAGATTCACAATTAATGCAATTCGAAGTCCAAACTAACGAACAGGGACACATTTTAAACATAAAACCTGCGTCAAATATAGTCATTGTTGATGAATCAATTAAAAATCAATTAATGCCGCAAGTTGAGTTCGATGATAAAACGAAAAAAGATATTGAGTTTTTTATTAGTGAGAAATACATGAAACAAAAGAATGATTCGCAAAAGAAGAAGATTTGTGATGTGTGCCAAAAAGAGTTTGCGTCCAATTATCAGTTGGTGCGCCATAAAAAAATACATAATAATGAGAGAGAACATGCGTGTACGCATTGTACGCGAACGTTCACGCAGAAAAGTTCGTTGATTTCGCATCTTAATATTCATTCGGGTAAAAGACCGTTTGCGTGTCCGTATTGTTCGAATACGTTTAGTCAAAGTGGGAATTTGAAGACGCACATTAAAAGAATACACGGTTTAGTTACGGACGCAACAGTAAATGAAGAAATTAGTTCTGATTTATTGAACAATAGTTAA
Protein Sequence
MSNNETFPLLQNNTNETVTLIALPLQIFQQGTQQQNVIGNRQILFKSLPDGSIIIDTNQFYNETAPIDCPEMEQNPEKPTDLIGKAIAAIEDKHEESMNTETIPKNKQRVRYLNNKTRQNSRNSTRSRKDGNKPEITEKTGPFKCKFCDKEFRKWNLLNRHEKNHMNESKFKCPTCTASFNILSNFLLHLATHNTSDPTCPECGKKFTRNASLKAHLMYHEKEETFYCEECDMSFQNEMEMETHLKGHGKIRKVDGDSLQCRYCQLTFDVQSELKKHVSEHNKVRMKSLLQVPRRKIQRKVVPIERKHQCKICLKAFQKHSQIERHMRVHSGEKPYECKECDRGFSQKGSLQIHMTRHTGIKPHKCALCPAKFSQKGNLRAHIAKTHSVPAGGANVFSCSECACVFTRLGSLNGHMTRNHPKQKESDIKAVMSQLAAMQNHMTIADDILQQAMARSDLPQLQNVDDKPDCPIATYVTLADLGIDGTMRRYIIKLRIAGDIRWHMCSFCPKEFKKPSDLVRHIRVHTREKPYKCKVCSRSFAVKSTLTSHVKIHRKVKKIQCKHCPKYFSSWSSLNVHARKHTGTKPYKCSVCAKTFRTTLLLQQHFQIHLTSAKDTLYSKDPNSEIIMQQPIYISSKGLQSVGVPLRKRPLVEAGAKNRPYTCLICNAGFRKLSHLKQHHIRHTGERPFRCHLCLRSFSSTGVLKSHILTHSGAKPYTCVLCDKNFATNGSLRRHFESHSTVRPFLCPYCYKDFKTVLSCRKHMKIHKLELTLQLQASKDCGFTTPDLVQPKPNELPFPPDLTDPLNEPFILVNHDLINNDELVDDPVEAEMVTQTLRADKTGTVVLPVIANQENLTQENMQEIEDTLNSQMLNIIGDENYINSPYLKKISADEPIASTDELVSTLTENSGKTIDDNAYLYQHVIVNLNSEAEQMFDNVGIDNILSQVKLQNDSLFLTDLNSININESNNILSYQIAEQTDLQQNQMLLQIEPPIDQTINIDESINLEESINLEPNLQIKLQAMGDFLNAQPEQNILAESAQFLTQTQTLEKEQEEEIGTDSMICNLCKLNFKNKSDLKLHRCLHFVDVNVNPRNENELAESFTLPAAEVVFDFGNSVDTDQVEESVDVSPNNVPVYRNQCTFCPKTFRKPSDLQRHLRTHTGERPFKCNECAKSFSLKSTLESHVRVHQDRKSFACNVCGSLFASKGSLNVHMRLHTGAKPYKCCLCHLRFRTSGHRKAHLAVHYKEAAKTGKLPHQISTRKAKMSVLMDGVQSLIGDLNPKDLDDKDPDGQLEELPLTENHVKSYENIVLNTQDSQLMQFEVQTNEQGHILNIKPASNIVIVDESIKNQLMPQVEFDDKTKKDIEFFISEKYMKQKNDSQKKKICDVCQKEFASNYQLVRHKKIHNNEREHACTHCTRTFTQKSSLISHLNIHSGKRPFACPYCSNTFSQSGNLKTHIKRIHGLVTDATVNEEISSDLLNNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-