Lko_08197-RA
Basic Information
- Insect
- Laupala kohalensis
- Gene Symbol
- Pias3
- Assembly
- GCA_002313205.1
- Location
- NNCF01126833.1:166310-167860[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-25 1.9e-21 75.2 5.6 1 50 350 399 350 399 0.97
Sequence Information
- Coding Sequence
- ATGGCCGAAGCTGAAGCACTGAAGAGCATGGTGATGAGTTTTCGTGTGTCAGAGTTGCAAATGTTATTAGGTTTTGCTGGTCGCAACAAGTCAGGCAGGAAAACCGAACTTCAAGCTCGTGCGGTGGAGCTGTTGCGTTTACGTTCCACTCCTGTGGAAATGAAAATTAAGGATCTTTACAAAACAATTCATCAAGCGCATGCGACCGGAGCACCAATGCAGCAATCGGGCCCTTCGAAGGATAGTGCAGTGCACAGTAGCGCACTgcagcaacagcaacaacaacaacaacaagctTCTCAGAGAAGTAATGTTTATCCTATTTCGAGTTATGAGCCCAATAGGGCTTTACCACCTCCCACCGCTGGTATGTATTCTTCCAGTATTTATCACCATCCATCATATCAAGCCAAAGCATCTCCTCCTGTTCCTTATAATAGTTATCCTGTACATCCAGATGTTAAACTCAAGAGGCTACCATTCTTCGATATGCTGGGTGAACTGTTGAAACCTTCAACTTTGGTACCACAGGGTTCACAAAGTGTTCAAGAAGGGGGCTTTGTGTTCCATTTGACTCCACAGCAAGCAACAGACATTGGTATGTCTAGAGAGCTGAGACCTGgtttaaaaatggaatatttcatCCAGGTACAGATGAGGTTTTGTTTAATTGAAACTTCATGTGAACAAGAAGACTGTTATCCTTCGGGCATTGCTGTGAAAGTCAATGGTAAAATTTGTCCCCTACCCAACCCCATTCCGACCAATAAGCCCGGTGTTGAACCTAAGAGGCCACCTCGCCCTGTAAACATCACTCCAATGGTGCGACTAAGTCCAACTGTTCCGAACCATGTTAATGTAACATGGAATGGTGAATATGGAAAAGCTTACGCGATAGCAATTTATTTGGTTCGGAAATTGTCTTCATCTGAGTTACTTCAGAGATTGAAGTCAAAGGGTGTTAGACCTGCTGATTATACCCGTGGATTAATTAAGGAAAAACTTCAGGAAGATGCAGATTGTGAAATTGCTACTACATCTCTGAAAGTTTCATTGCTCTGTCCATTGGGAAAAATGCGTATGACTACCCCATGTCGGGCTTCTACTTGTTATCATTTACAGTGTTTTGATGCATCTTTGTACCTACAAATGAATGAGAGAAAGCCAACGTGGATGTGTCCAGTTTGTGATAAACCTGCTCTATTTGATAATCTTGTCATTGATGGATATTTTCAGCAGGTATTAGAATCTGGAAAGCTCAAAGATTGTAATGAAATTCAGCTTCATGAAGATGGTTCTTGGTCATCTctgataataaaaaaggaaagtacTGAAGAATTGTCTCCTGCTACTGACAAATGTGTTAAAATAGAAGTTGACGATATAGTTGTGATCCCTGAATCTAAAACAGAAAGTAATGTTGATGAGGACAGTAATCCATCTCAAACTCCAGCACCTAAAAAGGAACCACAGTTTATAGATCTAACTTTTAGTGACTCTGATGATGATGGTTCTGATAGTGTTAAGGAAGTGAGTCTTGTGAAGACATAA
- Protein Sequence
- MAEAEALKSMVMSFRVSELQMLLGFAGRNKSGRKTELQARAVELLRLRSTPVEMKIKDLYKTIHQAHATGAPMQQSGPSKDSAVHSSALQQQQQQQQQASQRSNVYPISSYEPNRALPPPTAGMYSSSIYHHPSYQAKASPPVPYNSYPVHPDVKLKRLPFFDMLGELLKPSTLVPQGSQSVQEGGFVFHLTPQQATDIGMSRELRPGLKMEYFIQVQMRFCLIETSCEQEDCYPSGIAVKVNGKICPLPNPIPTNKPGVEPKRPPRPVNITPMVRLSPTVPNHVNVTWNGEYGKAYAIAIYLVRKLSSSELLQRLKSKGVRPADYTRGLIKEKLQEDADCEIATTSLKVSLLCPLGKMRMTTPCRASTCYHLQCFDASLYLQMNERKPTWMCPVCDKPALFDNLVIDGYFQQVLESGKLKDCNEIQLHEDGSWSSLIIKKESTEELSPATDKCVKIEVDDIVVIPESKTESNVDEDSNPSQTPAPKKEPQFIDLTFSDSDDDGSDSVKEVSLVKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00759771;
- 90% Identity
- -
- 80% Identity
- -