Lko_07719-RA
Basic Information
- Insect
- Laupala kohalensis
- Gene Symbol
- ZMIZ1
- Assembly
- GCA_002313205.1
- Location
- NNCF01126869.1:152021-158969[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.051 3.3e+02 0.7 0.9 4 24 145 165 142 170 0.88 2 2 2.3e-26 1.5e-22 78.7 4.4 1 50 226 275 226 275 0.98
Sequence Information
- Coding Sequence
- ATGAGCTACCAGCACAGTCCCATCCCAGGCAATCCCACGCCGCCGCTTACTCCCGCCAGCAGCATGCCGCCGTATATCAGTCCAAATCCCGATGTGAAGCCCAACTTTTCGGAACTCAAGCCACCTCTGCCAATACAGAaagatgaTGAATTACGTTTGACATTCCCTGTTCGCGATGGCATCATCTTACCGCCTTTCCGCTTGGAGCACAATTTGGCAGTGAGCAATCATGTCTTCCAGCTCAAACCCACTGTTCATCAGACACTCATGTGGAGGTCTGACCTGGAACTTCAGCTGAAATGTTTTCATCATGAAGACAGGCTAATGAACACAAACTGGCCAGCTAGTGTTCAAGTATCAGTCAATGCAACTCCCTTAAGTATTGATAGAGGGGAAAACAAAACCTCTCACAAACCTCTCTACCTTAAAGAAGTCTGTCAGCCTGGTCGAAATACCATTCAAATTACAGTATCGGCTTGCTGCTGTTCTCATCTTTTTGTCCTACAATTAGTACATAGGCCAAGTGTCAGAAGCGTACTTCAAGGTTTACTGAGGAAAAGACTGCTCACAGCAGATCATTGCATTGCTAAAATCAAGAGGAATTTTAGCAATACAGCATCTTCTGGAGGTGGCCTGGGAACTGACAGGGATGGTGTAGAGCAAACAGCTCTCAAGGTGTCATTGAAGTGTCCCATTACGTTCAAGAGGATCACTCTCCCGGCCAGAGGCCATGACTGCAAGCACATACAGTGTTTTGACCTAGAATCCTACCTTCAGCTGAATTGTGAAAGAGGGTCTTGGAGGTGTCCTGTTTGCAAtaaacCAGCTCAGTTAGAAGGACTCGAGGTGGACCAATATATGTGGGGTATTTTGAACACACTCAACAATTCAGAAGTTGAGGAAGTCACAATAGATTCCTCTGCCAATTGGAAGCCTGCGAAGAGTCTCCAGGGCATCAAGacGGAAGAGGATAATGATTCTTGTGGGGCTAAACGAATGAACAAGGCTATGTCCCCTGGAAGTATGACTCTTCCAACAATGAATAACTGGGATATGAATCAAGCAATGTCACCTTACATTCCTCCAGACATGAATAgTATTGCAAGTGGTTCCATGATGAATAGTGGTCCTCCTCCGTACAATGCTGCTAGTATGAACAGGGGCAACACGTACGACTTTGGTGCTGGTTCTAACCCTGGCAGTAATGAATATGCTGGTGGAGGGGGTCCATTATCTCACTTAAGTGAATCAGTCAATTCCTTGGATCCCCTCAATGCTATGGAGAAAACATTGAATGAGCAGATGCCTCATACTCCGCATACACCCCACACCCCTCACACACCTCACACTCCTGGAGGTACTCCTAGTGCTCACACACCTGGAGGTGGCAACAGTGGACCTCCTAGTGTTCCTCCAGCTACCACAACTACCGATGGTGTAGTGGGTACTACCACAAGCACTGGTAACACCAGCTCGAGTGGGAGTGGTAATGGTAGTCACACTGTCACAACCACTGCTGGAGGAGGTGCAACTAGCAATGCAACTACGGAGACACCTGATATTCCATCTGACCTCAACTTCGATCCTGCGGCTGTCATTGACGGAGAAGGCCAAGGGCAGGAGGGTCTCAatcTTTTACCTGATAACGTTGTTGATCCAATGGAACTCTTATCTTACTTGGATCCACCTGATCTTGCCACACCTCCATCAAGCGGAGCAAGCAGTAATGGTAACAACGGCACTCCAGGGAATACTACCAGTGATGATATCCTTGCACTTTTCGAATGA
- Protein Sequence
- MSYQHSPIPGNPTPPLTPASSMPPYISPNPDVKPNFSELKPPLPIQKDDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVHQTLMWRSDLELQLKCFHHEDRLMNTNWPASVQVSVNATPLSIDRGENKTSHKPLYLKEVCQPGRNTIQITVSACCCSHLFVLQLVHRPSVRSVLQGLLRKRLLTADHCIAKIKRNFSNTASSGGGLGTDRDGVEQTALKVSLKCPITFKRITLPARGHDCKHIQCFDLESYLQLNCERGSWRCPVCNKPAQLEGLEVDQYMWGILNTLNNSEVEEVTIDSSANWKPAKSLQGIKTEEDNDSCGAKRMNKAMSPGSMTLPTMNNWDMNQAMSPYIPPDMNSIASGSMMNSGPPPYNAASMNRGNTYDFGAGSNPGSNEYAGGGGPLSHLSESVNSLDPLNAMEKTLNEQMPHTPHTPHTPHTPHTPGGTPSAHTPGGGNSGPPSVPPATTTTDGVVGTTTSTGNTSSSGSGNGSHTVTTTAGGGATSNATTETPDIPSDLNFDPAAVIDGEGQGQEGLNLLPDNVVDPMELLSYLDPPDLATPPSSGASSNGNNGTPGNTTSDDILALFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01478591; iTF_00202191;
- 90% Identity
- -
- 80% Identity
- -