Lko_27366-RA


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Laupala kohalensis
Gene Symbol
RERE
Assembly
GCA_002313205.1
Location
NNCF01130263.1:130556-200332[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.1e-08 5.4e-05 22.3 2.5 1 35 282 316 282 317 0.91

Sequence Information

Coding Sequence
ATGCCATTGCGCGTCGAAAGTAGTCAGGCGAATTGTGAACCTGTAACTAATGAAGAATGGCTTCAACTCAAGGGGAAATTAGAGTTGGTCCTTCTCATCagaaaaattGCGCGTCTTCCTGATTACCGGTCAGGCCTATCTTCAGCAGAAGTTGCCTTATCATCCCCAGATGCAGACTTGAACCATGTGAGAGAAGATTTAAGATGGATACCAGCCATGACTCTGGATACAGATCTCCTTATGTACCTAAGAGCGGCGAGATCTATGGCAGCTTTTGCTGGCATGTGCGATGGGGGGTCTCCAGATGATGGGTGTATTGCTGCAAGCCGTGATGATACCACAATAAATGCTCTGGATATGTTACATGATGCTGGCTATGATCCTGCTAAAGCACTGCAGGCACTCGTGAAATGTCCTGTTCCCAAAGGCATTGATAAAAAATGGTCTGAAGAAGAAACGAAGCGGTTTGTCAAGGGATTGCGGCAATTTGGCAAGAATTTTTTCAGAATACGGAAAGATTTGCTACCTCATAAAGACACTTCAGAACTAGTGGAGTTCTATTATTTGTGGAAGAAAACTCCTGGTGCTAATAATAATCGCCCTCATAGAAGGAACAGACGTCAAGGATCTCTACGTCGTATTAGAAATACTCGGAACACTCGGGGAGGAAATAATCAAGCAAAGGAAATGGATGCCAGCTCTCCAGTGAGCACTTCCGCAGGTTCTACGACATCATCGAGGCCATCACCAAATTCGAAAGATCAAGCTGAAGGAAGTTCCGGTAGTGAAGAAGAAAATTCTGAAGATGAAAATTCAGATTCTAGAGACAATTCATCTTTGCGATGTCAGCATTGCTTCTCCACTAattCAAGAGACTGGCAGCAGTCTGGGAAAGATCGTTCACCTCTTTGCTCTGAGTGCCGTGCTTACAGTAAAAAATATGGAGAGCTGCCACCACTTATCAACAATCCGAATGTGGTCAACAGTGTCCTGACTCCTGGACGAGGGGAAGCCCCCTACTTGTTCCGACCGGTTCAGAACTTGGAAAATTCCGAAGATTTCTCTGGCCGGATGCGTACACGCACTCGTTCTAAAGAACAGACTGCCGGGAACCGCCCGCAGCATGGAAACGGGACGGACACTCCCGAGAGTGAGATGGACAAAAAGTTGAGCAAGTCCCCCGCTAGTAATGCGTGCTCTCCCAGTGACAAGAACAAAAAGAAGTCCAAGTCTGAGACGCCCACAAAGGGAAGGAAAAGAGGTCAAATGGATGTGGAGAATGAAGATGAGAAGGACATGGCACTCTTCAAAAGGAGAAGAAATGATCGAGCAGAGAGCCCAGCTGAGAGTTTGACTACGGATAGTGGATCAATGGTTGATGACGGAGACACCAATGAACAAGATAATGAATCATCTGAAAATGCGGCTAGTTGTGTTGTTGGTTCTGCTACGGAGAGTTCCGGTAATAATGTGTTCCAGAGCGAATTGTCTCTGCCTATTGATAAAGTAGAATCTGTGGGAAGTTCAGTGACTTCATCGCTGATAACAAATGTCTCTTTGTCTTCGTCATCAAGTCTTCATCAGCCACAGTttactcctcctcctccacctcctccgcCTCTAGTACAGAATCTGCAGTCGTCAGTGCAGATAGCTCTATCTCCCCAGATGTTGTCTCGACCGTCTCTGCCTCCTCCTTCAGGGTCTATACCATTGCATCCTGTGAATGCTGGTGTTGTTCCATCTGGCGTTGTCGGTTCTGTATCTAATTCTAATGTTTGTTCTACAGTTTCATCTCCTGCTGCTGTTTCTTCAATTATTGGCTCTGGTGGAGGTAATTGTGATGGCATGAGCATCAGTGGTGATAATGGTAATTTGGTTGCAACGGGAACTGTGACAAATAGTTCCATTTTGAATGCGACCATTAATACCACCCTCACTTCGAATACTGCTGTTAATATTTCCAACGGGGCGAATACTACTTCTGCTGCAATGAACTCTTATCCTTGTGGCACTGCTGTTGCTACAGTTCCTACACCTACTACGAGTGCTATCTCTAATATTTCTGCTGCTCAAAGTAACTcgaaatttaatgcaaatattccTTTGTGCTTTCCTACTGGTTCTGCTGCTAGTGCATTCTCTTCTTCTCTGATACCATCAGCTGCGACTGCTGTTTCTTCTGGTGGTAGCCTTCCCACCTCTGTTGTTGATGTTGACTCTCCTACTAATGGGGTCAATGTTTCTGAATCGACTCTCCCCTCTGCTGGATCTACTTCTGTTGCTAATGCTGCTTCCGTTATTACGACAACAGCTTCGAATGCTGCTGTGTCTACCATTACCACTATTGCCCCTAGTGTTGCTGGAACTACCTCTGGTTACCTTGCTGCTGTTACGTGTGCATCTACTAGAACATCTCTGAACCCCTCTGCCATGGCCGAAACCATTTCAAACACACTTTGTACTTCTGCAACTGATAATGTTGGTGGAGTTGATTCTCTTGGAGCCAATAGTGTCATTAGTGCTACGTCTGGGTCTGTCTTGTGTGCATTTGAATCCTCGGATACCTGCCCTCCAAGTACTACCTATGTGACTCCAACAGCAAATACAGACGCTGTGTCCTCCATTTCCCTTTTGAATCCGAACGTACCTCTGGCTCCTGCTCCAGTAAAATTGGGTCCAGCCATGACATCCCAGCTTCCATATGTACCAGGAGAGATGGTTCTTGGAGTGAGAAATGCTCCACTCAGTTTGAAAACTCAAGGTAGTGAATGCAGCCATGAGCCACATGTCAGGTGTGGACAAGGAGCACCCTGTGCAAATAGTTCTGGTCTTGAAGGCATTAGAGTTGCAGATATTGCTGTGAtagacaaaatgaataaagatgTGATCAGTTCCGATGAAATGAAGGTTGGGTTTGACAGGGACATTGTTAAGCTCTCTAATACTCTCTCATTTTCTCATTGTGCAGTGAAACATGAAGGCTTAAAATTAGAGAAACTGGAAAAGGAAGGCGAATTTCATTGTagtaatgaagataatttttataaggCCAGAAGAGAGGTTCGAATCAGTAAGACAGAATTTGACAAAAAGGACCAaagtattatttcttgttttaaaggAGTTGAAGATATTTCCACAGGAATGAGTAGAAACCCTCACATTAAAGAAGAAATGGACTCCAGTAATGATGGTATGATGAATGTATCATTATCTGGTAATTTACCGCTGAAAGATTCTATGTCACCTGTTAGCTCTTGCCCAACTGTGATGTCTGCACCATTTTCTAATTCTTCTGCTGGAGGAAAGTCTGGTAGCAATAATGTGATGTCGAAGAACTTCCAGAAGGTAACTCCCAGTATTAAATTAGAGCCAGGATTGGGTTGCGAAGAACAAACTCAGCATTCCAATCTTGCTGAGGAGAGTGGAGATATGAATCCCAGTGACTTACCAAATCTCCCATCTGCAATGGCACGTGTGACTTCTAGTGCAAGTGAGAGTTCAAGTGTGGTAGATGTTTCAAGTTCTTTAGCTGCTGGGAACTCTTCACCACGCCAGGGAACATCCAATTCTGCTATTATACGTCAGACTGTTTCAGATGATTTATCCCTGGGTTCATCTCTAGACAAAGAGTCATATCCACCCGGTAACTATGAAGAAGATGGTCATGATAAATTGTCTCATTTACAAAACCCATTGAGCACTTCTGAACCTGGTTCTCAACATAATGTATCGCAAGGGAATCCCAATCAATCAAGTGTTGTATCCCAAGGTTTCAACTTTTTGCATGCTTCCTCATACCATAGCCCTCAAAGATTTGGAAGTTCGAATgaggaaaatgtgaagaaaattttaacttccaaCAATATGTCAGTGGGAAGtgctgaaataaatcaaaatgaaccTCAAAACCTGAAGATCAAGCAGGAAGTAATTACTCAATCAGATCAAGTTTCTTCTGATCCTCTTCAGTCGCTAAAGGAAGTGAAAATTCCAGGTTATTCTGGTTCCAATCTCTCTTTAGCTGGAAACAGTGTGAATATCTCCCAAAGTGCTTCTGGATTTGGTGTTGATATTCAAAGGTCTCCATCAGGTCCTGAACCATTACCATTTCTGGGACCATCTGTGGAGAACATTAAGAAGGAACCAGATAGCTTTGTTGCAAACTCTGACTCAAATGTTGCGCCACCTGCAATCCCTGCCAGTGCCTTAAAAACATCAGCTAAATTACAACCTAATATAGCTGATAGTGGAAATAGTGGAATGCCTTCATTACGTTCATCGCCTCTGGCTCGTGCAATACCCGAGGCTCCTTTGCCTACACCCATATCATCCACTCACGTGTCTGTTCCTCATAGTGCTGTAAGTCTCATATCTCCATCAAGACTCACTCCTACTTCGCTTCCTAGTGCTCCATCTGGAATTCCGAATCCTGTTCTCCACCCTGCTCAACAGTCTTCGCCTATCGGCCATTCTTCGCCCGGTCATCCTCACCCCACTCCTCACCCTCATCCTTCCCCCCATCCGCATTCTTCTCCATTCATTGGACCTCCTAGCACTCACCCTGTTCTGCATCACCACCCTCACACTCTGATCCATCATTCCCTATTTGCTGCTGCAGCGCAAGCCGCTGCTGTGCATCATAATCCATACCATCCTCCTCACCCTTATGCTGCTTATGGCTATCCTTTCCCTTACCACTATGGGCATCTTCCTCAGCACCATCCACTTCCCCCGCACCACTCTCCACCGGCATCTGTTGTTGCTGCGGTGTCTGCAGCATCTGCTCTACCTCAACGTTCTACGCACGAATCAGTGAAGGTTGAAAGACCGCCGATTGAATGTCCCACTTCCTTGAATTCCTCTAGTAACACTAGCCATTCAAGCTCATCTCGTCGTGAGATTCTTGCTAACGATGACATTGTGCCCTACGCCAACCAACCTAGTGAACGGCACCATGCTCAAGAAATAGTGTCACCGTTTGGCCATCATCAGTCTCATTTATCGCTACATTCAATTCATGCAGAGAAGCCAGGACATTCAACCTCCCAACCTTCTAGCTTACCTTTGCAGCCATCAATTTCAGCCGCCGCATCAACTTCGCACAAAGCAAACACTCCCGGTAAATGTGTATCTGCTGCTAACCGATCCAGCCCGACATGTCACAATGCACCGATCATGTCTACAGTTCCACCTACTTCTACCTCGGTAACATTAGCTCCCAGTAATTTGCAACATTCCCATGGACATCATCATCAACTCTTGCATCATTCGCCTTCCATACCTGGAGGAACCGGTGGGGGTTGTACGGAATCCTCCACTACAGCAAACTCTTTACTCAATCACTCAGCTCATAATGTATCTTCCAACCCACGAGCGCATCATCCGAATCCAGGACACCACTCTTCTCTTAGTTACCATGCCAAGCACAACAATCATCCTGTTCTGATGGTGCAGCCACCTGCCCTTAACCACCAAGGCATTGGCTTAGGATTGACTCCTTCAGTGCCTGCGTCATCTTTGGAAGCTCTTAGATATTCTGCCAATAATACTCTAGGTCCCCATCAACTTCCAAGTCGTCATCTTAGTCAAGGTTTCAGTGATGATATGAAAATTGAACCTGCACCAGAAGTAACAGAAACACAGCCTGAAGAGGAGATCCCAAGCCCTTCGCATATCCCACGAGGACCCAGTCCAGAACCAAAGATTGAAGACACTGATTTCTTGCGGCATTGGAACCGTGGAGATTTTAATTCGTGTGCCAGAACTGATCTAACGTTTAAGCCAGTCCCAGATTCAAAACTGGCCCGCAAGAGGGAGGAACGTCTTCGCAAGCAAGCTGAAAGGGAACGGGAGGAACGAGAGAAAGCTGCTTCACAATCTCACAGTcATAAGCTGGCTGCTGCCGAGAAAGCAGAAGCAAGCAAGCCACCTTCTCGGGGGCCCATTGAAACAATTACATCCCCTTATGATCGGTTCACTCCTCGTCAAGGTTACGATACTCCTGCCCTACGCCAGCTCAGGTTGGAATTGGAGCagatagagagagagaagagagaaagagataTCCGTGAACTTAGAGAGAGGGAGTTAAATGATAGATTGAAAGATGAATTGATAAAAAGTGCTGGTACAGGACCGAGAATGGCGAGTTCTCTAGATGCTCATTGTTTGGATTTACAGCGCAGATACGCCGGTCTGGGCCCCAGCGGGCCGGCCCACCAGTTCGGCCTGTACACGTCGCCCGCCGCGCCGGGCCAAACCGCCCTCAACCAGCTGGAGCGCGAGCGCTTGGAGAGATTGGGTATCCCCACCGGTCCCGCAGGGCCGCTCGGGCCGGCAGCTGTGGGGCCTTCAGGCCCCCATTCCGCGCATGCGCATCCGCATGCGGCAGCTCACGCCAGTTCGGTGGCTGCCGCTCAGGCGGCGCAGGCTCAGTTGGAAGCTGCGGAGCGACTGGCTCTGGCCACGGACCCCATGGTGCGGCTGCAGATGGCTGGTATCTCGCCCGAGTACCATGCTCATACGCATGCCCATACGCACGCCCATTCCCACACGCACCTGCACCTGCACCCGGGGCAGCAGGCGGCGCAAGCCCAGGCCGCTCAGCAAGCTGCAGCGCAgcaggaggcggcggcggcggtgggcgcCGGCTCGCCGGCCTTCCCTCTCGCAGTCGCTTGGCAGCGCTGCTTCACTCAGATTCCAAATTATGGGACCAGTCGTTCGGACTGGAGTTCTCGACTCCCCCCATCTCTACTCGCTTTACCTGTTGCATCATCTGCTGGGGCTACATATCCTCGACCAAGTCTTATACCAGGTAGAGAACCATCTCTCGCTCTACACCACCCTCCTGAGCTGCTGGGGAGAAACCCAGGCTACGCTGATCAACTGGCACATCAGttatCAGCTCAAGCAGCTCACGAACAGCTTCAACGCCAAATAATGATGGAGAGGGAGAGGTTTCCACATCCTCATGCCTCCTTAGTGGCTCAGCATGAAGAATACTTGCGCCAACAACGCGAGAGAGAAATGAAAGTGCGAGCGTTGGAAGAAGCAGCGAGGGGATCTCGCCCTTAg
Protein Sequence
MPLRVESSQANCEPVTNEEWLQLKGKLELVLLIRKIARLPDYRSGLSSAEVALSSPDADLNHVREDLRWIPAMTLDTDLLMYLRAARSMAAFAGMCDGGSPDDGCIAASRDDTTINALDMLHDAGYDPAKALQALVKCPVPKGIDKKWSEEETKRFVKGLRQFGKNFFRIRKDLLPHKDTSELVEFYYLWKKTPGANNNRPHRRNRRQGSLRRIRNTRNTRGGNNQAKEMDASSPVSTSAGSTTSSRPSPNSKDQAEGSSGSEEENSEDENSDSRDNSSLRCQHCFSTNSRDWQQSGKDRSPLCSECRAYSKKYGELPPLINNPNVVNSVLTPGRGEAPYLFRPVQNLENSEDFSGRMRTRTRSKEQTAGNRPQHGNGTDTPESEMDKKLSKSPASNACSPSDKNKKKSKSETPTKGRKRGQMDVENEDEKDMALFKRRRNDRAESPAESLTTDSGSMVDDGDTNEQDNESSENAASCVVGSATESSGNNVFQSELSLPIDKVESVGSSVTSSLITNVSLSSSSSLHQPQFTPPPPPPPPLVQNLQSSVQIALSPQMLSRPSLPPPSGSIPLHPVNAGVVPSGVVGSVSNSNVCSTVSSPAAVSSIIGSGGGNCDGMSISGDNGNLVATGTVTNSSILNATINTTLTSNTAVNISNGANTTSAAMNSYPCGTAVATVPTPTTSAISNISAAQSNSKFNANIPLCFPTGSAASAFSSSLIPSAATAVSSGGSLPTSVVDVDSPTNGVNVSESTLPSAGSTSVANAASVITTTASNAAVSTITTIAPSVAGTTSGYLAAVTCASTRTSLNPSAMAETISNTLCTSATDNVGGVDSLGANSVISATSGSVLCAFESSDTCPPSTTYVTPTANTDAVSSISLLNPNVPLAPAPVKLGPAMTSQLPYVPGEMVLGVRNAPLSLKTQGSECSHEPHVRCGQGAPCANSSGLEGIRVADIAVIDKMNKDVISSDEMKVGFDRDIVKLSNTLSFSHCAVKHEGLKLEKLEKEGEFHCSNEDNFYKARREVRISKTEFDKKDQSIISCFKGVEDISTGMSRNPHIKEEMDSSNDGMMNVSLSGNLPLKDSMSPVSSCPTVMSAPFSNSSAGGKSGSNNVMSKNFQKVTPSIKLEPGLGCEEQTQHSNLAEESGDMNPSDLPNLPSAMARVTSSASESSSVVDVSSSLAAGNSSPRQGTSNSAIIRQTVSDDLSLGSSLDKESYPPGNYEEDGHDKLSHLQNPLSTSEPGSQHNVSQGNPNQSSVVSQGFNFLHASSYHSPQRFGSSNEENVKKILTSNNMSVGSAEINQNEPQNLKIKQEVITQSDQVSSDPLQSLKEVKIPGYSGSNLSLAGNSVNISQSASGFGVDIQRSPSGPEPLPFLGPSVENIKKEPDSFVANSDSNVAPPAIPASALKTSAKLQPNIADSGNSGMPSLRSSPLARAIPEAPLPTPISSTHVSVPHSAVSLISPSRLTPTSLPSAPSGIPNPVLHPAQQSSPIGHSSPGHPHPTPHPHPSPHPHSSPFIGPPSTHPVLHHHPHTLIHHSLFAAAAQAAAVHHNPYHPPHPYAAYGYPFPYHYGHLPQHHPLPPHHSPPASVVAAVSAASALPQRSTHESVKVERPPIECPTSLNSSSNTSHSSSSRREILANDDIVPYANQPSERHHAQEIVSPFGHHQSHLSLHSIHAEKPGHSTSQPSSLPLQPSISAAASTSHKANTPGKCVSAANRSSPTCHNAPIMSTVPPTSTSVTLAPSNLQHSHGHHHQLLHHSPSIPGGTGGGCTESSTTANSLLNHSAHNVSSNPRAHHPNPGHHSSLSYHAKHNNHPVLMVQPPALNHQGIGLGLTPSVPASSLEALRYSANNTLGPHQLPSRHLSQGFSDDMKIEPAPEVTETQPEEEIPSPSHIPRGPSPEPKIEDTDFLRHWNRGDFNSCARTDLTFKPVPDSKLARKREERLRKQAEREREEREKAASQSHSHKLAAAEKAEASKPPSRGPIETITSPYDRFTPRQGYDTPALRQLRLELEQIEREKRERDIRELRERELNDRLKDELIKSAGTGPRMASSLDAHCLDLQRRYAGLGPSGPAHQFGLYTSPAAPGQTALNQLERERLERLGIPTGPAGPLGPAAVGPSGPHSAHAHPHAAAHASSVAAAQAAQAQLEAAERLALATDPMVRLQMAGISPEYHAHTHAHTHAHSHTHLHLHPGQQAAQAQAAQQAAAQQEAAAAVGAGSPAFPLAVAWQRCFTQIPNYGTSRSDWSSRLPPSLLALPVASSAGATYPRPSLIPGREPSLALHHPPELLGRNPGYADQLAHQLSAQAAHEQLQRQIMMERERFPHPHASLVAQHEEYLRQQREREMKVRALEEAARGSRP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00872217;
90% Identity
iTF_00872217;
80% Identity
iTF_00872217;