Lko_05415-RA
Basic Information
- Insect
- Laupala kohalensis
- Gene Symbol
- pnr_2
- Assembly
- GCA_002313205.1
- Location
- NNCF01126653.1:1369982-1392539[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-18 8.7e-15 53.6 4.4 1 35 464 497 464 498 0.98
Sequence Information
- Coding Sequence
- ATGAGGAGACAAGAAGAAGCAAAGATATTGGACACAACGGGACCAGATATCTTAGTAAGTGAAGTGGAAGCGGTCATACAGCAAATGAAGGAAGGGAAAGCAGCTGGATCAGATGGCATACAAGAAGAATTCCTCAAACTGctctatgaagaaaaaaaaGCGTTCTCCTCGGGATTGGATCTTACCTGCAGTGATATGATGTATTCCTGTTTTTCGACAATGACTGTTGTTGGCGACAAAAAAGTGTCAGAGCGTGACCTTCTACCCCCTTCAATCTGTCATCGATGTGTTTATAAATTGGATGTGTTATATGACTTCAGAGAAGTATCAAGGAAGTCTgatgttattttaaaacagtatttatcTTACACAGAACATTTGTCGTCAATAACTAAAGAACACTCTAAGAGAACATGTCCTATGCTGGAAGATCTCGGTGGAAAGAATAGTGAAAATGGTTCTTGTAGTGAGCAGGAGTCTATTCCTTCTCCCCATGGTGAAAAAATCTTGCCAGATCCAGAAGCTGGTGCACTAGAATTGAGAATCAAGAAAGAACCTACTGAAGAgtcagaaatagaaaatgaagaacctaagaataaaataataaatggggAACCAGTGACAGATTATAGTAAAAGAGACAAAGCAGAGGAAGATTCAGCAGATAAATTGCCTTCAAGCAGCCAATCTGAACAATGTTTGGATATGTCAATGGATACACAAAATGTGCGTGTGAAAATGGAATGTAATGAAGAGATGCCTACTAGTCCACAACAAGATCGTGATGAGAGTTCTGCTTCAGATGCACATTTAGAAAACGAGGATAACATTCAGTGGACTtgcagtTCTAAGCAATCTGCAGCTGATGCATGTAATCCATCCAGTGGCGTTGGAGAAGCTAGCAACCTTCTGAGAACCCTCATATCTTGTAGGAAGATCAACATAAATCCTTCTGAGACTACTTCCAGCCATATTTCCTCCTTGCAACATTCACTCAAATCTCGAAGTAAATTATATCTTAATATGGACAGTCCATCTCCAGTTGGTTCAACGGTTTCTGAAATGGATGGTCCACATTCAATAGTTTTGGGTAACCGAACGAATTTGCCTGTTGCTGAAGACAATGTTTCTCCCCTCTCAATGGTGGTCAAATCTGTGGACAGAATGAGAGTGGGAAGTATCCCATCTGTTTCTTCTGTGAAACAAGATAGTAATAGAAGAAAGCAAAGTTTTCCTTCCAAAGCTGATGCATCATCTGGACGACAAAGTCCTGTTGGATCTCAAGTTTCGGGTGAAACTTACTTGCCTGACTTTACTGGAAACAATCCCTGGTGTAATCTATCAGCTGTGAAATCCGGAAGGcTTGCAGCACGACGTATAGATCTAGCTTGTACAAATTGTGGTACAATGACAACTACAATTTGGCGTCGAAATCCAGAAGGAGAGATGGTTTGCAATGCATGTGGACTGTACTATAAACTTCACGGTGTCAATAGACCTGTAACTATGCGTCGGGACACAATTCATACCCGACGACGCAGACCAAAGGGCGATAAGGAAAAGGGCAGCAGTCGACACAAAAGTAaATCTAGTAATGTTAGCAACACAAGTGGAGAAAATCCAGAAGAGATGCTGGCTGCGTGGCGGAAACAAATACAATCTCATTTAATTCTAGCCACTCAAGCAACACACCCTGAAGCTCGTGAACCTTCTCCCCCTCCTGGATTTTTAATTGCACCTGCAACAGATTCTCCATATCCTGAAGTTCATGTGAAATCTGAACCAGTGGATTCAGAAGATGATGATGAGAATCTTACTGATTTACCTCTCAATCTTGTTGCAACCTCTCTTTCTGAACCA
- Protein Sequence
- MRRQEEAKILDTTGPDILVSEVEAVIQQMKEGKAAGSDGIQEEFLKLLYEEKKAFSSGLDLTCSDMMYSCFSTMTVVGDKKVSERDLLPPSICHRCVYKLDVLYDFREVSRKSDVILKQYLSYTEHLSSITKEHSKRTCPMLEDLGGKNSENGSCSEQESIPSPHGEKILPDPEAGALELRIKKEPTEESEIENEEPKNKIINGEPVTDYSKRDKAEEDSADKLPSSSQSEQCLDMSMDTQNVRVKMECNEEMPTSPQQDRDESSASDAHLENEDNIQWTCSSKQSAADACNPSSGVGEASNLLRTLISCRKININPSETTSSHISSLQHSLKSRSKLYLNMDSPSPVGSTVSEMDGPHSIVLGNRTNLPVAEDNVSPLSMVVKSVDRMRVGSIPSVSSVKQDSNRRKQSFPSKADASSGRQSPVGSQVSGETYLPDFTGNNPWCNLSAVKSGRLAARRIDLACTNCGTMTTTIWRRNPEGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGDKEKGSSRHKSKSSNVSNTSGENPEEMLAAWRKQIQSHLILATQATHPEAREPSPPPGFLIAPATDSPYPEVHVKSEPVDSEDDDENLTDLPLNLVATSLSEP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -