Lko_14496-RA
Basic Information
- Insect
- Laupala kohalensis
- Gene Symbol
- gata4
- Assembly
- GCA_002313205.1
- Location
- NNCF01129947.1:575851-582927[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5 1.3e+04 -6.7 3.9 21 27 2 8 2 9 0.77 2 3 1.3e-18 3.5e-15 54.9 3.2 1 34 21 53 21 55 0.97 3 3 1.1e-19 2.9e-16 58.3 3.2 1 35 75 108 75 109 0.98
Sequence Information
- Coding Sequence
- ATGACGCTGTGTTGTGGGTGTGGTGCAGTCGATGCGGACTACTACAGCGAGGGCCGCGAGTGCGTCAACTGTGGCGCCATCTCGACGCCGCTGTGGCGCCGCGACGGCACGGGCCACTACCTGTGCAACGCGTGCGGCCTCTACCACAAGATGAACGGCATGAACCGGCCGCTGAGCAAGCCATCTCGCAGAATGAACTCAGCTCGTAGAGCTGGAATGCAATGTTCAAATTGCCAGACATCCACAACTTCTTTGTGGAGAAGAAATGCAATGGGAGAACCTGTCTGCAATGCATGTGGACTTTACTTCAAATTACATGGAGTTAACAGACCACTTGCCATGAAGAAAGATAGTATTCAGACACGAAAACGAAAACCTAAAAGTGGAACCAATGGTGGATCAAAAGCTGATTCTGGTGGTGGTACAAATGTCACTTGTGCTCTTTCAATGCCCATAAGTTCTGGATCTAGTCCTTTGGGTCCACCACCTCCCAAGAGGGTGAAGTTGGAACACACAGACAACAGCTATCAAGATTGTCACAACAGCTCAGGTGTTGGTGTTCTTGGAAGTTCTGCAGGTTTAGGAACTCACAATGGACATGCATATCCTCCTTCACTCTATGCTCCACCATCATACAGCCATATGTTAGGTACTACAGCACCGCCTGTGAATTCCTCAGCATACTATGAATTGCTCCAACCTCATAATCATCACCATCAACACCATCAGAATGTGCAAGCTACAGGACACCACTCTCCAAAGGTATAA
- Protein Sequence
- MTLCCGCGAVDADYYSEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLSKPSRRMNSARRAGMQCSNCQTSTTSLWRRNAMGEPVCNACGLYFKLHGVNRPLAMKKDSIQTRKRKPKSGTNGGSKADSGGGTNVTCALSMPISSGSSPLGPPPPKRVKLEHTDNSYQDCHNSSGVGVLGSSAGLGTHNGHAYPPSLYAPPSYSHMLGTTAPPVNSSAYYELLQPHNHHHQHHQNVQATGHHSPKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -