Basic Information

Insect: Laupala kohalensis
Gene Symbol: ZNF341_1
Assembly: GCA_002313205.1
Location: NNCF01125934.1:619093-637399[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.91 43 4.4 5.7 1 23 54 76 54 76 0.89

2 10 1.8e-05 0.00086 19.2 0.6 1 23 474 496 474 496 0.99

3 10 0.013 0.61 10.2 3.5 1 23 502 526 502 526 0.96

4 10 0.0025 0.12 12.5 3.2 1 23 532 554 532 554 0.98

5 10 0.021 0.99 9.6 1.5 1 23 568 592 568 592 0.90

6 10 0.0039 0.18 11.9 2.4 1 20 594 613 594 616 0.92

7 10 6e-06 0.00028 20.7 0.2 1 23 622 644 622 644 0.97

8 10 0.00011 0.0053 16.7 1.8 1 23 650 672 650 672 0.97

9 10 0.00015 0.0069 16.4 0.9 1 23 678 705 678 705 0.97

10 10 0.065 3 8.0 8.0 1 23 711 733 711 734 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.91	43	4.4	5.7	1	23	54	76	54	76	0.89
2	10	1.8e-05	0.00086	19.2	0.6	1	23	474	496	474	496	0.99
3	10	0.013	0.61	10.2	3.5	1	23	502	526	502	526	0.96
4	10	0.0025	0.12	12.5	3.2	1	23	532	554	532	554	0.98
5	10	0.021	0.99	9.6	1.5	1	23	568	592	568	592	0.90
6	10	0.0039	0.18	11.9	2.4	1	20	594	613	594	616	0.92
7	10	6e-06	0.00028	20.7	0.2	1	23	622	644	622	644	0.97
8	10	0.00011	0.0053	16.7	1.8	1	23	650	672	650	672	0.97
9	10	0.00015	0.0069	16.4	0.9	1	23	678	705	678	705	0.97
10	10	0.065	3	8.0	8.0	1	23	711	733	711	734	0.95

Sequence Information

Coding Sequence: ATGGCTCATATGCTTTTTGATGCATTGAATGGAGTACAATTAGATAATCATACAGTACAAACAATCTTGGAAACAACCACATTATCTCATGATGTATCTTCTGGTGTTAAATTGCTGACTGGACCACCAACTACAATAACCTTAGATGAGGAGGATGTTTTCCAATGTGGCAAATGCAAAAAACAGTTCACATCATTTGCTTTATTTATGTGTCACAAAAAAGAACATTCTACAGGTGATTTACTTAATGATGGTGCTGATGCATGTCAAGACCCAGGGCCTACTGACTCGAGCAGTTTCCAACAGCTGCAAGTACAACATCTGGATAGTTCAatcaatacaaatgaattatgCCAACCTATTATTCTTAGTGAAGCTGATATCCTTTCATTTAGCATTGATGATGACAATGCTCTTAGTCTCAATTCTTCAACACAGGTCAGGACAAGGTGTACTCCAGAATTTGATGAaaATTCCTTACCCAACGTCCAAGATGAAAGGTCATTTTTGGCATCTAATAACAATGGACCTGTAAAAGGAATGCAAGATCCATCTGCTATACCAAGTGCTTTTAGTTCAAGTCTTACATCTCGACCTGTCATTTTAACAGAAGAGCCATCACAGAATTCATTCACATCTGCATTACACAATATTCAGTCCATCCCTGGTGGTAAGAGTATTACCTCCACTGCATCTTCTAGTAAGGACCTTTctcagaatattaatattctggCCACATTTCCAGAAAGTAACCCAAAAGGTTGTAAGGTTTTGCTACCGAGTAGTGAATACATTGATGGAAGTGTGGAGAATGGCACTTTACTTTTGGAATGTGACAAAGTTTCTGAGAAAATCCTCCAGTATACTGGATCAATAGAGGCTGATGGAACAGTTTTACTTGATTATGCAGAAGGAAATCCAAAAAAGATGTGCAAGGTTTTGTTGGCCAATGGTGAATACACAGAGACGAGCATTGAATATATAGATGGTACAAATGGTATCTGTGAATTCTCAGGAATGCCTGACAGTGTGCGAGAAGGCAGTGATGATGTTGTGGCTGTGAGTTTACTGGATGTTATTGAGTCTCCTGTAGCTTTAGAACTCTCCAAAGCAATAAATGATGCAGTTGATAATGAGCAACTTACAATTGGAGAAGAAAATATTCCCATTAGTCTCCCAGATACCAGCAATTCTGTTGTAAGGGGAATTGAACATGTCTCTTCTGAAAAAACAGGAGAAAGCAATAATCGATCTCAAAACATGAAGAGTGCAAAGGTACTTGTTTGGCCTGTTGGTCTATCTAGAACATTACCAAAAGAACCTGTTCAACGGGTGGAGAAAACAGTAAGCAACAATGAACAGCAGAACAATGGAAATACCTGTGATGAAAATAGAAGTGTCATAGTTGTAGATAGGTCATATGTTTGCCAGTATTGTGATTCAGCATTTCCGTCTTACTTTGAACTCAAGGCCCATATGAAGAAACATTCCCATCAGAAAGTTTATAAATGTGTTCAACATAATTGTCAGAAGACATTTGAAGATTTAGATCTTTTTTTGAAACATACCAAGCAGCACACTAATGATGTCCAATATTGTTGTCatgtatgtttgaaaaatttcagcactttaGCTGATTTGGGTATACACCAATACACTCATGATGGAAAAGATAGAACCAGTGCTAAAAATCCTAGGTATTACTTGTGTGTGAAGTGCAAAAGCAAATTTACCTCATCAAAAGCTTTAGATCAACATATGTCAACAACGAATCATCATTTCCCATGTACCCATTGTGGCAAGGTGTTTGCTTGTGAGAGATACTTACGTCGTCATTTACCTGTGCATGGCGCTCCAGCTTCATTTGTTTGTTCTATTTGTGGTAAGGGCTTCCGAACTGAGCAGTACCTGAATATTCATCGTATCATTCACAGCGGAGAGAGACCTCATACTTGCATGCATTGTCCTGCTGCATTCAATCGTAAAGATAAGTTAGCACGTCATTTGTTAATCCATGACTCTGTAAAAAAGTTCAAATGCCCTTTCAATAACTATTTAGGATGTTCTAGGGAATTTAACAGGCAAGATAAGCTCAAGCTTCACATCCTTACTCACAGTGCTGTAAAACCCTTCCACTGCtggaaatgcaataaaatatttcacaaacagAATCTTCTTCGGGACCATGAAAAAAGTCATCACCCTGCAGACATTCCTTTCTCGTGTGCCCACTGTGGTTTGTCCAAAATTGTCACTTTGGAAATTGAGCCTTCAAAGGCTGGTAGGGTAAGAAAATTAAGGAAGATTCGAAGTAAACGAACCTCAGTATCTACAATTGACACCAGTGACAAGCCAGCCAACACCACGGAAGAAATTCAGCGTACAGTTTGCCAAGAGCCTAAGTTGGGCTCAGAGAACATAGCAGATAGCGATAGTGTACCTACCATCGAAATAATTGTAATGCCTATGCACATGAATCGTAGGAgtggaaatgaagaaaataaaaatgtataccaTGTTATGTTCCCTGCATCTTCCAATGGTGAAGAAGTGCCAGCCAAATCTCTTCAAAGTAGCTTAATTAATTCTTTGACTAATTCCTCCAAATGTGTACCTGAAGGGCACAAGGACCACGTTCTAACAACTTGCATTGAGGGAATGGATGATCTATTTTCATAG
Protein Sequence: MAHMLFDALNGVQLDNHTVQTILETTTLSHDVSSGVKLLTGPPTTITLDEEDVFQCGKCKKQFTSFALFMCHKKEHSTGDLLNDGADACQDPGPTDSSSFQQLQVQHLDSSINTNELCQPIILSEADILSFSIDDDNALSLNSSTQVRTRCTPEFDENSLPNVQDERSFLASNNNGPVKGMQDPSAIPSAFSSSLTSRPVILTEEPSQNSFTSALHNIQSIPGGKSITSTASSSKDLSQNINILATFPESNPKGCKVLLPSSEYIDGSVENGTLLLECDKVSEKILQYTGSIEADGTVLLDYAEGNPKKMCKVLLANGEYTETSIEYIDGTNGICEFSGMPDSVREGSDDVVAVSLLDVIESPVALELSKAINDAVDNEQLTIGEENIPISLPDTSNSVVRGIEHVSSEKTGESNNRSQNMKSAKVLVWPVGLSRTLPKEPVQRVEKTVSNNEQQNNGNTCDENRSVIVVDRSYVCQYCDSAFPSYFELKAHMKKHSHQKVYKCVQHNCQKTFEDLDLFLKHTKQHTNDVQYCCHVCLKNFSTLADLGIHQYTHDGKDRTSAKNPRYYLCVKCKSKFTSSKALDQHMSTTNHHFPCTHCGKVFACERYLRRHLPVHGAPASFVCSICGKGFRTEQYLNIHRIIHSGERPHTCMHCPAAFNRKDKLARHLLIHDSVKKFKCPFNNYLGCSREFNRQDKLKLHILTHSAVKPFHCWKCNKIFHKQNLLRDHEKSHHPADIPFSCAHCGLSKIVTLEIEPSKAGRVRKLRKIRSKRTSVSTIDTSDKPANTTEEIQRTVCQEPKLGSENIADSDSVPTIEIIVMPMHMNRRSGNEENKNVYHVMFPASSNGEEVPAKSLQSSLINSLTNSSKCVPEGHKDHVLTTCIEGMDDLFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -