Basic Information

Insect: Laupala kohalensis
Gene Symbol: ZNF236
Assembly: GCA_002313205.1
Location: NNCF01127836.1:481835-517476[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.7e-05 0.0008 19.3 2.7 1 23 213 235 213 235 0.97

2 15 6.1e-05 0.0029 17.6 0.1 1 23 241 263 241 263 0.97

3 15 2.2e-06 0.0001 22.1 0.4 2 23 269 290 268 290 0.96

4 15 0.016 0.77 9.9 0.1 3 23 298 318 296 318 0.94

5 15 9e-05 0.0042 17.0 3.5 3 23 333 353 331 353 0.96

6 15 0.53 25 5.2 0.1 8 23 472 487 471 487 0.93

7 15 0.0053 0.25 11.5 1.6 1 23 493 515 493 515 0.96

8 15 0.00033 0.015 15.3 6.8 3 23 523 543 522 543 0.99

9 15 8.6e-05 0.004 17.1 8.4 1 23 910 932 910 932 0.99

10 15 0.0032 0.15 12.1 1.3 1 23 938 960 938 960 0.97

11 15 0.0078 0.37 10.9 1.4 1 23 966 988 966 988 0.95

12 15 0.00016 0.0073 16.3 2.5 1 23 1091 1113 1091 1113 0.97

13 15 2.6e-07 1.2e-05 25.0 1.8 1 23 1371 1393 1371 1393 0.96

14 15 9.2e-05 0.0043 17.0 3.3 1 23 1399 1421 1399 1421 0.98

15 15 5.1e-08 2.4e-06 27.2 1.8 1 23 1427 1450 1427 1450 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.7e-05	0.0008	19.3	2.7	1	23	213	235	213	235	0.97
2	15	6.1e-05	0.0029	17.6	0.1	1	23	241	263	241	263	0.97
3	15	2.2e-06	0.0001	22.1	0.4	2	23	269	290	268	290	0.96
4	15	0.016	0.77	9.9	0.1	3	23	298	318	296	318	0.94
5	15	9e-05	0.0042	17.0	3.5	3	23	333	353	331	353	0.96
6	15	0.53	25	5.2	0.1	8	23	472	487	471	487	0.93
7	15	0.0053	0.25	11.5	1.6	1	23	493	515	493	515	0.96
8	15	0.00033	0.015	15.3	6.8	3	23	523	543	522	543	0.99
9	15	8.6e-05	0.004	17.1	8.4	1	23	910	932	910	932	0.99
10	15	0.0032	0.15	12.1	1.3	1	23	938	960	938	960	0.97
11	15	0.0078	0.37	10.9	1.4	1	23	966	988	966	988	0.95
12	15	0.00016	0.0073	16.3	2.5	1	23	1091	1113	1091	1113	0.97
13	15	2.6e-07	1.2e-05	25.0	1.8	1	23	1371	1393	1371	1393	0.96
14	15	9.2e-05	0.0043	17.0	3.3	1	23	1399	1421	1399	1421	0.98
15	15	5.1e-08	2.4e-06	27.2	1.8	1	23	1427	1450	1427	1450	0.98

Sequence Information

Coding Sequence: atggaaacaCAAGGTTCTGGTGAAATGGTTGCCAATTCTTCAGTGACACTtgtcaataacaatattattgagaATTCAGACCTTGTGTTTTCAAGTGAAGTCTTGAGCCAATCCGATGGGAGACTAGAGGATGGAACGACATACATTACAGTacctttacattttttacaaaatccaGCCATTCCTGAAACAAGCAcaattcatgataattttctcttaaaaactGCTGGAGGAAATGCTATTTTAATTGATGCTAGTCAGtttgCATTATTAACTGGAGAAACTAGTCAGTATGTTCTAAATGGTGCAGACCTCTCTGAAGAACAAACTAATCAAATTGTACTTCCTGATGAAATATTGACAAAAGACAAAATAGTTCCACGAAATGAAATTCTCTCAGAAATGGGTATTGGCATTGATTTGAATAACTTAGGAACTACTGATGATATTTTATCTGTACATATTGAAGAGGGATCTCACGTGCAATCCTCAGGGAATACGAATGTAACTTTAAATTTAGCAAATGTGATCTCAAATCAGTTTTCTACATTGGTACCTGAGTGTAGGTATAAAAGAGGTCCTGGACGACCTAGGAGAGAAGAGGTGGAAGTTGATCCTCCTATTGGAAAAGGTCCTTTTTGTTGTGAAATATGTGGCAAGGAATTTGCAAAGTGGTCACAGATGAAGAAACACACAAAACTGCATTCCGATGACAAACCTTTTGCTTGTCCAAAATGTTCTGCATCTTTTAATGTTGAGtcaaattTAACTCTTCATATGGTTACACATGACTCTGAGAATCTTACATGCCCTGAATGTAAGAAAAAGTTTTCTCGTCTGGCTAGTTTGAAAGCTCATATTATGTTACACGAAAAAGAAGAAAGTCTCTTTTGTCCTGAGTGTGCTGAAGAATTTAGTACTCAGGTTCAGTTGGATGTCCATTCCAAGGAACATCAAGAAGAGGACACCAAAGTTCCCAtgccaaaaataattaattgtagacATTGCCATCAGGCCTTCACGAGAGCTAGTCTGCTCAGGGAGCACATGAAAGAACACTATAAGgTACCCTCAGGTCATTCTGTGAGACCTGGGTTTGTTACTGTAAATCTCGAGTCTATAATGACGAGTCTTCCTAATGGAGAAAATAAGACTCGAAATGCTGAAGTGGATTCAGATATTTTACAGCAAGCTTTGGTTAATAGTGGGTTGTCTGGAAAATCACAAGATCCAAATTCAGATTCTTTGAAGGGAAATCCTAACATAACTAGAAATGGTGTCTCAATTTTTCCATCAAATCCCATATCTGCTAATTCTTTAGATGAGCAATCTGAAGGAAGTTTAAAACCTTCCAAAGGCAAGAGTTCTACAACTTTTGTGGCTCTGGCTGAAAAGGCTTTAGATGGAAGTGTAAGGTGCTTCTTTTCCAATGCTGTTTTGAAGGCTCATATTAGGACACATGATGGAATTAAAATGCATATGTGTGTTGTATGCAACAACCTGTTTTCCACTCAGAGGAGTTTGAAGAGACATGCTGCAACACACAGTGATCAAAGAAGTGTGTTATGCCCCTACTGTCATAAaactttcaaaactaaaattaactGCCGGAAACATATGAGGATACATCGACAAGAATTAGCTTTAcagGCTGCTCAGCAGAAAAATAAAGAAGCTTTATCAAATGGACCGGGAGTGCCTATGAATACTTCATTTACCTCAGTACTACCTGAAGATTATCCTCAAGCATTTACTGACCAAACATTCTCACTGCCAAGGACTCAACAGAATCAAATAGGCACTGACTTCAGTCAGAATACGACTATAGTTCAATCTTTAACTAGTGATTTGTCTGCACCTTCTGATCTCCACTCTGTTCAAGATGTGATTACCCATACTCTAAATGCTGATGGGTCTGGGACAATAACTTTACCTGCTGGACAGCATACACTTACTCaggaAAACATCAACGAAATTGAGAGGACATTGAATGCACGAATATTTGGTCCTTCAGAAAATCCTGTAGTTAATTCTAATGACAATTCTGCTGGTTTGGGTATTACATCTTCTAGCAGTGTCCCTAATGGAGAAGCGGGGCATTGTAACAATCTTCATGCCAATGGTGAAAATATTCTTCCTGATAATACTAGTGACATAGAATCCACTACTACTGATGACTTGTCTCGCACATTTACTGCTGCTGCAGTTGAATCTACGCAGACTCAACAAACCATGATTCCAGAGTTTGTTCTATGTGAAGGTCAAAGTGGAAATAAGACTTCCAAGTCAGATACTAATGGCTTATTTGCTGCTTCATTTGGAACACAGTCATTTGACAACtgtgttttttcttctgtttccttgcagGCTGATCTGGAATCTTTGGCTCAAAATTCTTCTATTACTTCAAACATTAATCCTATAATACCATCATCTAATGACAATGCTGCAGAAGCCTCCATAACAGAAGCTGTAAATGGAGATTTACAGGGAGGTGCCACCATAAGACTGACTACGGGagaaattttatctaaaatttctaGTTCAGAATTAATTAGGGATGATGGTCAAGAAATTATGAATCCCAATGAGGAAAATGGGCAAGTTATCAATAGAGAGAAGGCTGAAGGTCAAGAGGAAGGAGTACATGAGTTTGAAGAAGTGGCAGATGAGCAAGCTGAAGAAACTCTTGTACATGTCAGTCGGGGACGAGGTAGTAGAAGACCTTTCAAATGTGATGTATGCAAGCagtcttttaaaaaaagttgtcaTTTGAAATCTCACATGCGCTCACATACTGGGGACAAATCCTATATTTGTACTTACTGCAATGTAAAATGTGGTTCATCAAATGCTTTAAAGGCCCACTTGAAACTGCATGCAGGGGAGAGAGATTTCTTGTGTCCAATCTGTCAGAGCCGATTTACTACTAATGATACTTTGACATGTCACATGGCCATTCACAGTGACATaagGCCATTCAAGTGTAGTGTGTGCTTTGCACAATTTCGCACAGATACTAGTTTTAGCCAGGTACGAAAACACATCAGACTTCATGAGCTGGGTGAGAAAAAAGAAGTAGCAGAACCTCGAGGAGGGAGAAGAAGAATTGCAGTAATTCAATTAACACCAGAAGAAACACAAGTGCTTGCTCAACAATCACTTGATAGTGCCTCTACTGTGTCTGAGAAAGTTCTTATCTCTTCAGCTGCTGAAAAGGATAGAATTAGTGAATTGAAGtgtCATTTGTCTCAAATTAGAGCAAAACCTTTCAAGTGTCCTAAATGTGACATGAGATTTCGCACTTCTGGTCACCGTAAGGCTCATCTGGTATCTCATATGAAGGAGATGATTAGTAACAAATCAAGCCACTCACATGGTGGGAAATCAGGATCAAGAAGGCGCAAATTGCTCTCTGCAGCTTTGAGTCAAGTTCCTACTGCTGACTCTGGCTCAGCACTCCAAGTTGCTGAATCCCAGCTCAATTCCATGTCCCAGATAACGTTGGATGCCAATACTTTGGGGAATTTATTACCTTTGTCATCATCTGATCCTCTGAATTCGAGCTCTTTATTGACTAACAACTCTGATAACAGTGCTGTAGTAAACAATTTGCAGTTCCAGATTGCAGATGGTTTTCAGATAACTGGTATTGATTCCTCTGGAACTCTGTTGACTCAGTCATTACAGTTGGATGAAAATCTTCTACATCAACTCCAGCAAACctcaaatataattatacagaCTTCTGTGCCTGATTTACCTGAAAGTGCTTCAGATAATGTAGTGAATAACCCCTCTACGATAGAAACAATGCCTTCAATACAGTACGAAGTTCACACTGATGAAAGTggtcatattataaatattactcctACTAATCATATTAATTCTGGAAATGTCATCTTCAATGTTGGAAATGAATTAGGAATGCAAGTAATTGACAATACAGACTCAGCCTTAACTTTGACAGAACAACCTATTCCCTCCAAGTATCGTGTAACTGACAGTCTTAAAGGAGGCAGATCATTAATTGCTTTGAATGAGTGccttgaaaagaaagaagaatcagAAGAAGATGTAGTTGTAGAAGATGACTTTCTCGTCTTTCATGACTGTGAAGTGTGTGGTAAGCGTTTTTCAAAACCTAGTCAGTTGCAGCGACATACTCGTATACATACCGGTGAGAGGCCATTTGAATGTCATTTGTGTTTGAAACGTTTTAACCAGAAGAATGCGTTGAATACTCATATTAAAAGCCATACTGGAGAACGACCATATCCTTGTCCACACTGTGATTATTCCTTCACTCAGAAGGGTAACCTTAAGACACACTTGCGGAGAGCACACAGATTTAGTTCTTTGGAGTTAGTGAAACCTAACTCACCATCAAAGTCTGTTTTAAAGATGAAGCAACCTACCTTAACTGTGTGCAACACAGAAATGGGGAATGCTTTGGAACATGTTGTGTGtgatttttttcctcaaataaGGAATACAGGTCTTAGTGATTCAGATCCCGTTAATAAACTGTGctaa
Protein Sequence: METQGSGEMVANSSVTLVNNNIIENSDLVFSSEVLSQSDGRLEDGTTYITVPLHFLQNPAIPETSTIHDNFLLKTAGGNAILIDASQFALLTGETSQYVLNGADLSEEQTNQIVLPDEILTKDKIVPRNEILSEMGIGIDLNNLGTTDDILSVHIEEGSHVQSSGNTNVTLNLANVISNQFSTLVPECRYKRGPGRPRREEVEVDPPIGKGPFCCEICGKEFAKWSQMKKHTKLHSDDKPFACPKCSASFNVESNLTLHMVTHDSENLTCPECKKKFSRLASLKAHIMLHEKEESLFCPECAEEFSTQVQLDVHSKEHQEEDTKVPMPKIINCRHCHQAFTRASLLREHMKEHYKVPSGHSVRPGFVTVNLESIMTSLPNGENKTRNAEVDSDILQQALVNSGLSGKSQDPNSDSLKGNPNITRNGVSIFPSNPISANSLDEQSEGSLKPSKGKSSTTFVALAEKALDGSVRCFFSNAVLKAHIRTHDGIKMHMCVVCNNLFSTQRSLKRHAATHSDQRSVLCPYCHKTFKTKINCRKHMRIHRQELALQAAQQKNKEALSNGPGVPMNTSFTSVLPEDYPQAFTDQTFSLPRTQQNQIGTDFSQNTTIVQSLTSDLSAPSDLHSVQDVITHTLNADGSGTITLPAGQHTLTQENINEIERTLNARIFGPSENPVVNSNDNSAGLGITSSSSVPNGEAGHCNNLHANGENILPDNTSDIESTTTDDLSRTFTAAAVESTQTQQTMIPEFVLCEGQSGNKTSKSDTNGLFAASFGTQSFDNCVFSSVSLQADLESLAQNSSITSNINPIIPSSNDNAAEASITEAVNGDLQGGATIRLTTGEILSKISSSELIRDDGQEIMNPNEENGQVINREKAEGQEEGVHEFEEVADEQAEETLVHVSRGRGSRRPFKCDVCKQSFKKSCHLKSHMRSHTGDKSYICTYCNVKCGSSNALKAHLKLHAGERDFLCPICQSRFTTNDTLTCHMAIHSDIRPFKCSVCFAQFRTDTSFSQVRKHIRLHELGEKKEVAEPRGGRRRIAVIQLTPEETQVLAQQSLDSASTVSEKVLISSAAEKDRISELKCHLSQIRAKPFKCPKCDMRFRTSGHRKAHLVSHMKEMISNKSSHSHGGKSGSRRRKLLSAALSQVPTADSGSALQVAESQLNSMSQITLDANTLGNLLPLSSSDPLNSSSLLTNNSDNSAVVNNLQFQIADGFQITGIDSSGTLLTQSLQLDENLLHQLQQTSNIIIQTSVPDLPESASDNVVNNPSTIETMPSIQYEVHTDESGHIINITPTNHINSGNVIFNVGNELGMQVIDNTDSALTLTEQPIPSKYRVTDSLKGGRSLIALNECLEKKEESEEDVVVEDDFLVFHDCEVCGKRFSKPSQLQRHTRIHTGERPFECHLCLKRFNQKNALNTHIKSHTGERPYPCPHCDYSFTQKGNLKTHLRRAHRFSSLELVKPNSPSKSVLKMKQPTLTVCNTEMGNALEHVVCDFFPQIRNTGLSDSDPVNKLC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -