Lko_05650-RA


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Laupala kohalensis
Gene Symbol
ZBTB41
Assembly
GCA_002313205.1
Location
NNCF01126728.1:912848-970236[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 34 7.2e-06 0.00034 20.5 0.4 1 23 239 261 239 261 0.97
2 34 2.2e-05 0.001 18.9 3.6 1 23 267 289 267 289 0.99
3 34 0.0031 0.15 12.2 2.2 1 23 295 317 295 317 0.98
4 34 0.00026 0.012 15.6 5.0 1 23 404 426 404 426 0.97
5 34 1.1e-06 5.4e-05 23.0 0.5 1 23 432 454 432 454 0.98
6 34 6.3e-06 0.0003 20.7 1.8 1 23 460 482 460 482 0.98
7 34 0.00013 0.0063 16.5 10.7 1 23 488 510 488 511 0.96
8 34 0.0041 0.19 11.8 0.5 1 23 582 604 582 604 0.92
9 34 8.4e-05 0.004 17.1 2.1 1 23 610 632 610 632 0.95
10 34 0.00099 0.047 13.7 1.6 1 23 638 661 638 661 0.96
11 34 3.6e-06 0.00017 21.4 0.5 1 23 667 689 667 689 0.98
12 34 0.0044 0.21 11.7 1.7 1 23 768 790 768 790 0.99
13 34 1.1e-05 0.00052 19.9 3.6 1 23 796 818 796 818 0.98
14 34 2e-06 9.2e-05 22.3 1.2 1 23 824 846 824 846 0.98
15 34 0.068 3.2 8.0 2.8 1 23 961 983 961 983 0.97
16 34 0.00011 0.0054 16.7 0.8 1 23 989 1011 989 1011 0.99
17 34 1.4e-05 0.00065 19.6 3.3 1 23 1017 1039 1017 1039 0.98
18 34 0.0034 0.16 12.1 7.0 1 23 1142 1164 1142 1164 0.99
19 34 0.0057 0.27 11.3 0.5 1 14 1170 1183 1170 1184 0.92
20 34 0.00019 0.009 16.0 3.9 1 23 1213 1235 1213 1235 0.98
21 34 0.047 2.2 8.5 0.2 1 23 1241 1263 1241 1263 0.95
22 34 0.00016 0.0077 16.2 4.4 1 23 1269 1291 1269 1291 0.97
23 34 1.7e-06 8e-05 22.5 3.4 1 23 1297 1319 1297 1319 0.99
24 34 0.00013 0.0061 16.5 0.9 1 23 1325 1347 1325 1347 0.98
25 34 0.00082 0.039 14.0 1.1 1 23 1402 1424 1402 1424 0.98
26 34 9.8e-06 0.00046 20.1 2.6 1 21 1430 1450 1430 1451 0.96
27 34 0.00067 0.031 14.3 0.4 1 23 1503 1525 1503 1525 0.98
28 34 1.9e-05 0.00091 19.1 0.3 3 23 1533 1553 1532 1553 0.99
29 34 1.4e-05 0.00067 19.5 4.5 1 23 1559 1581 1559 1581 0.99
30 34 8.7e-07 4.1e-05 23.4 1.1 1 23 1587 1609 1587 1609 0.99
31 34 5.8e-07 2.7e-05 23.9 4.1 1 23 1615 1638 1615 1638 0.98
32 34 4.4e-05 0.0021 18.0 4.6 2 23 1723 1744 1723 1744 0.98
33 34 0.00019 0.0089 16.0 1.5 1 23 1750 1772 1750 1772 0.98
34 34 0.001 0.048 13.7 4.6 1 23 1778 1801 1778 1801 0.96

Sequence Information

Coding Sequence
ATGACTATCAATGACACATTAAGAATGGCCAatctggaaaacctggaaaagatAGGGAAATTTGTACGAAGCCTGGgaaatggGGAACCAGATCTTATTGAAGGCTTGAATTTCTTCCTTCCTATTGTGATTGaggAAGTTCGTGCTCTCGCCCATAAACCGGAACTTACAAACATTTACCATAACCGTTCTGTCCGCCAGGGTCCGCTGCAGTCACCGAGCCGTTGTCTTTTAGTGCGCACAGCTACGCGGGAGCGCGATCAGATGGTTTGTGGACGCGACGGCTCCGCCGAGACGTCGTGGTCACCGCGACCGCGCCGCGCGATGATGACAACAACTCGTGCCCCTCGCCTCATCCGGCGCCGGTCCGCTGTCCCGTGTGTAACAAACATATTTCAAACTACACATGCGCCTGCACACGGGGCAAAAGCTGCATCGGTGCACGCTGTGTCCAGCCACGTTCCTCTCAGCCTGTCACCTCACGGAGCACATCCGTGTACATACGGGAGAGCGACCGTTTCAATGCTACCTGTGCCCCAAGACGTGCAGCAAGAAAAGCAACTTGCGTGCACACATCAGGAACACTCACAAACTCCTGCCGCTCGCCGCCCCATCTTCAATGAATCGCCCTCCATGTCGAGGTGGAAGAGACGCTCCAATACCACAGGTCCCAAGTTCACTGAACCACACTCATTTAATCCGACACGCAATATGCACGAGTGTTGGCAGTGTCGGAAGGTGTTCCCCACACCATCGGAGCTGAAGATCCACGTTCGGGTCCATACGGGAGAGAGACCGTTCCGCTGCCACCTGTGCTCTTCCGCGTTCTCTCAGAAGGGCACCCTGCAGCGTCATCTACGCACTCATACCGGCGAGAAACCCTTTCGCTGCCCTGCGTGCGGAGGACACTTCACGCGACGCACGGCGCTTGCAACGCACAGATGCGTTCACCGGACAGTGTCTCGTACAGACATGTCGCTGCTCAAATCGACGTTGCCTCAGCGGACTCCGTGGCACGTAGTAACGAATCCGGATTTCGAGGAGGACCACGCGGAACCTCCGGAAAGCGAGGACGAAGCACCCTGCGACTTATCTAGCGCCAAAGAGTCGTCGTCACCGCCACTGCCATCCCAACCTCGCGCATCGGCGTCCGCGGTGAGCAGTTGGTCGACGGCGCGACGGCGTCGCCATCGACCGTCCACAAAGGGACACGTATGCCTCACCTGCCACAAGCAGTTCATGTATCCCACGCAGCTGACTCGCCACATCCGAACTCATACAGGGGAGAAACCTTTCTCCTGCGAAGTGTGCCAGTTGACGTTCACAGAGTCAGGCAATCTTCAGAAACACATGCGCGTTCACACGGACGAGCGACCCTTCCAGTGTCCGTACTGCCTGAAGACTTTTCGCCAAAAAGCGCATCTGCAAGGCCACGTGATAACTCATACGGGCGAGAGACCCTACGTGTGCAAGGACTGTGGTCGTTCCTTCAGTCACACGCGTAACTTACGTCATCACCGTCATACGCATCATCCTCCGGTTAGTGAGCGTGAGCACTCCAGAGAGGTGCTGCACCCAGACCGACCGAAGAGTCAACGCTGTTCTCAATCGAAGCGATTCAATAGTAGCTTGCTCTACGGGTCATGTCGAGAAGAAGAGATTTTGGAGTTGCGTTTCGCAGCTGAAAGTGGCTCAGATGCAAGTTTACTCGAAGACCTAAATATTCTCAATAGTCGACGGACATTCGAATGTGTAGTGTGCAGAAGATTTTTTTATAGTAAGGAAGGTTTGAGAAGACATGCAGTTTTGCACGAAGACGTGAAACCTCACGCTTGTGCGTTTTGTCCGCTAACTTTCAAACACTCGGGAAATTTAAAGAAACACATCTTAATTCATACCGGGGAGCGTCCGTATCAGTGCGAGTTTTGTCCTCAAAAATTCACTCAAGTCAACTCTCTACAGTATCACACGAGGGCTAAACACACTGGCGAACGTCCGTTCAAATGTGAACAATGTGGGCATTCATTTATTCGCGCTGCCGCCCTAAGACGACATCTGGAGGTGCATCTTAAACGTTCcttgaaaaatatgaacaaatgcACTACTGAAGTCCGCGATAATGGCCGGTTTTTACACTCGTCCCTTTTGTCTTCAGGCAACATCTTTCGTGTGACGCCGCCGACAACGTACCTTGGAGGTATTGAAGTGGTCGAAGAAACTCCAATCGTTGGAGAACCGATCGGAATGCTTGATGATTGCGACTTCAGTGCGGCTGAGGTGACTTGTGGACTTGTAAAACGCTTCCAGTGTCCCAGATGCTTCAGACAGACCAAGTCCCGAGCCGCGCTCCGTGACCATTTCCGCATGCACACCGGCGAGAAGCCGTTTTGCTGTCCGGTGTGCTCGAAGAGGTTCTCCTTCCGAGGAAACCTTCAGAGGCACGAGCGGATGCACACCAATGAGAAACCCTATGAGTGCTCAGTCTGTACGAAAAGGTTCAGGTCGTCGTCTACTCTGCAAGATCACATGACAGTACATACTGGCTTGAAACCACACGTCTGTAAACTCTCTTTGGATGATATtgcagcagcagtagcagctcATGTGAGTGACGGCGAAATGTCTGTTGAAGATAGGGACACATGTCCGAAAGAGCAAATTATAGCCAAGACTAGCTGCCACAGTATTGAACTATGCCTTTGCTGTGTGCGCTTAGGCCGTGCCATCTGGAACGCAGGGATACGCAGGGGCGGCTGGACCGGCGGAGACTATGCCAACACTAATACCGCATTCCAGACGCAAAGCACCCGCGGAAGGAAAAGCAGTTCAAGAGGAAGAATAACAGTTCGCACAGTGTTGAATAACGACGGAGCGAAAGGATTCCAGTGCTGTGaatgcgaaaaaatatttttttcgaagcAAGGAGCTCAGAGGCACTTTCTTATTCACACAGGGGAAAGACCGTATCGTTGCGAGTTTTGTTGGAAGGGTTTTATTAACGGAAATGATCTTAAAAAGCATCGACGAATACACACTGGCGAACGGCCATACCCGTGTACTGTGTGCTCAAAGAGTTTCAAACGGCGGACGCACATGAACCGACATTTATTGATTCACGCTAATGACACTCGGAACTTTTCGGAGTTTGCTTCTTTTAACTTCgctgttataatattgtattgtatcgCGGGGCTTCGATTACGTCCTTCTCCCGTAGAACCCTTGAAGTACGTGTCGCCTCCTGTGTTTTATACGCACCTCACCTTTTCTTCAGGACCAACCGTGTTGCAACGGCCGTGTGAGGATCGCCTCGTCCTTCAGGCAGCACCATCGATCATTGACATGGTTCCCAGTGCCGGAGAGGATCGCAGCGCTTCCTGTTCGGAGAGGAACCCGTCGCAACTGGTTGATCCTACCAAGAGATTCCAGTGTCCTGTGTGCCCCAAGGGCTTTCACTTCTATTGCCATTTCCGGTTACACATGCGCGTTCACACCGGCGAGAGACCATTTCGTTGTAATATTTGCCACAAAATGTTCAGGCAGAGCTCTGCCGACAGTATGTCACACAATCTCATCCCGGGTGACCGAGTGACTGACAGCTACGACGCAAGAGGCAGATCACTACACGTGAAGAAATTCCAGTGTCCAGAATGCCATAAGTTGTTTAAGTTTGAATACGATTTTCGGAGgcacttactttctcataaagGAGAAATACCCTATACTTGCATTCTTTGTGGCGAAAGGTTTATGGAAACCAgtaaattgataaaacatttagCCATTCATACTGGCGAAAGGCGTTTTGCATGTCTAATATGCAAGAAACGATTTGCTCATAATCATTCCTTGAAAGATCATATCAAATCCCATACAGGGGAAAAGCCATACCAATGTTCGTATTGTGCAAAAAGATTCAATCGGTCGTATAGCTTGAGCAGGCATCTCCGAACTCACACACGGGAGAGTTCGTTTTCTTGTCTACTTTGCCCAATGGTGTTTACGGAAAATGATCATTTGATGAATCACGTAAAGACGCACAATATCTGGGTGGGTCAAGAAGTAGAGAGCGGATCCAGCCTTAGTGCCATGACACCCactcaaataaattatcaattctcGAGCTCCATTAATGATACTGATCCAAATACCGTGATCTCGCAAAATAAGTTGCAGAAACCCAAGCAGAGTGCCAAAAAACCTTATTCTTGTTCTGTTTGCCCCGCCCGATTTTGTTATCCCAAAGATTTGGTTTCCCATTTTCGTATTCATACTGGTGAGAAACCATTCGAGTGTCAGATGTGCGGACAAAGATTCAGAAGGCaacatcatttaaaaatgcaTATGCAGATCTTGACTTCCTCCTTTAACTCAGGCCTTTTTTCTTCAGGCTCCAGCAGCGGCTCTGCTGTACAATGGTCCAGGTACGAAAAAGGGCAAGAAAGGCGTGACGAGACTGGCGCTGCTGTCACGAACAGGGAGCAAGAGTTCCAAGTGATCAAAGGATACCAGTGTCCGGAATGCCCTCGCTCGTTCCTCTCCGAAGACGCCTTTCGGAAACATAAGATATCGCACGCCGTCGACAGACCACACGGCTGTCCTCACTGTCCGGCCAAGTTCGCGGTGGCAAGCAACTTGAACCAGCATCTTCGGACGCACACGGGAGAGCGTCCTTACGAATGCATGTACTGCAAGAAGCGATTCGCTCACAACAAGACCCTCAAGGATCATATTCGTACTCATACGGGCGAGCGACCGTATCAGTGTGTGTATTGCAAGAAGGGCTTCTCACAATCGGTTAATCTGAGAACTCACATTCTTACTCACACGGGTGAACTTCCATTTGAGTGTAACTTCTGTGATAAGTCATTCCGACAGAGAGCTCATTTGCAAAATCATTTGCGCACTACTCATCCTCATGAATATCAGTATTTAATTATCAGAGGTGTAAATAACTTTAGAGTCATTTCTCTGCCATCTGCTGAATCCATCTCTATTCAGTCCATTCTGTTTGCTTCAGGCAGCGGCATCGTCATTCGACCATGGCTGATTCCTGCGGGAGGAAACGCAGTAGATCAAACGGCTCCTCTTGAGTACTTCATGAAGAGAGAAGAGCACTTCCAGACATTAGCCGGAGGCAGTCTATCTCGTCCATCCAAGGAAGCACAATGTCCCAAATGCAAGAAGTACTTTAGACACAAATATGTCTTAACCCGACACATGCTGACGCATTCTGGAGAGAAACCACATCAATGCCCGCATTGTCCTTTAAAATTCACATTCGCAGGAAATATGGTGAAGCATCTCCTAGTGCACACGGGTGAACGACCGTATCGTTGCGACATATGTTTCCGATCGTTCAGACAAAGACCTCATTTGACATACCATGTGCAACATGTGCATGCGCCTAGAGATCCCCTAAATGTTAAACCACGATAA
Protein Sequence
MTINDTLRMANLENLEKIGKFVRSLGNGEPDLIEGLNFFLPIVIEEVRALAHKPELTNIYHNRSVRQGPLQSPSRCLLVRTATRERDQMVCGRDGSAETSWSPRPRRAMMTTTRAPRLIRRRSAVPCVTNIFQTTHAPAHGAKAASVHAVSSHVPLSLSPHGAHPCTYGRATVSMLPVPQDVQQEKQLACTHQEHSQTPAARRPIFNESPSMSRWKRRSNTTGPKFTEPHSFNPTRNMHECWQCRKVFPTPSELKIHVRVHTGERPFRCHLCSSAFSQKGTLQRHLRTHTGEKPFRCPACGGHFTRRTALATHRCVHRTVSRTDMSLLKSTLPQRTPWHVVTNPDFEEDHAEPPESEDEAPCDLSSAKESSSPPLPSQPRASASAVSSWSTARRRRHRPSTKGHVCLTCHKQFMYPTQLTRHIRTHTGEKPFSCEVCQLTFTESGNLQKHMRVHTDERPFQCPYCLKTFRQKAHLQGHVITHTGERPYVCKDCGRSFSHTRNLRHHRHTHHPPVSEREHSREVLHPDRPKSQRCSQSKRFNSSLLYGSCREEEILELRFAAESGSDASLLEDLNILNSRRTFECVVCRRFFYSKEGLRRHAVLHEDVKPHACAFCPLTFKHSGNLKKHILIHTGERPYQCEFCPQKFTQVNSLQYHTRAKHTGERPFKCEQCGHSFIRAAALRRHLEVHLKRSLKNMNKCTTEVRDNGRFLHSSLLSSGNIFRVTPPTTYLGGIEVVEETPIVGEPIGMLDDCDFSAAEVTCGLVKRFQCPRCFRQTKSRAALRDHFRMHTGEKPFCCPVCSKRFSFRGNLQRHERMHTNEKPYECSVCTKRFRSSSTLQDHMTVHTGLKPHVCKLSLDDIAAAVAAHVSDGEMSVEDRDTCPKEQIIAKTSCHSIELCLCCVRLGRAIWNAGIRRGGWTGGDYANTNTAFQTQSTRGRKSSSRGRITVRTVLNNDGAKGFQCCECEKIFFSKQGAQRHFLIHTGERPYRCEFCWKGFINGNDLKKHRRIHTGERPYPCTVCSKSFKRRTHMNRHLLIHANDTRNFSEFASFNFAVIILYCIAGLRLRPSPVEPLKYVSPPVFYTHLTFSSGPTVLQRPCEDRLVLQAAPSIIDMVPSAGEDRSASCSERNPSQLVDPTKRFQCPVCPKGFHFYCHFRLHMRVHTGERPFRCNICHKMFRQSSADSMSHNLIPGDRVTDSYDARGRSLHVKKFQCPECHKLFKFEYDFRRHLLSHKGEIPYTCILCGERFMETSKLIKHLAIHTGERRFACLICKKRFAHNHSLKDHIKSHTGEKPYQCSYCAKRFNRSYSLSRHLRTHTRESSFSCLLCPMVFTENDHLMNHVKTHNIWVGQEVESGSSLSAMTPTQINYQFSSSINDTDPNTVISQNKLQKPKQSAKKPYSCSVCPARFCYPKDLVSHFRIHTGEKPFECQMCGQRFRRQHHLKMHMQILTSSFNSGLFSSGSSSGSAVQWSRYEKGQERRDETGAAVTNREQEFQVIKGYQCPECPRSFLSEDAFRKHKISHAVDRPHGCPHCPAKFAVASNLNQHLRTHTGERPYECMYCKKRFAHNKTLKDHIRTHTGERPYQCVYCKKGFSQSVNLRTHILTHTGELPFECNFCDKSFRQRAHLQNHLRTTHPHEYQYLIIRGVNNFRVISLPSAESISIQSILFASGSGIVIRPWLIPAGGNAVDQTAPLEYFMKREEHFQTLAGGSLSRPSKEAQCPKCKKYFRHKYVLTRHMLTHSGEKPHQCPHCPLKFTFAGNMVKHLLVHTGERPYRCDICFRSFRQRPHLTYHVQHVHAPRDPLNVKPR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-