Lko_17897-RA
Basic Information
- Insect
- Laupala kohalensis
- Gene Symbol
- -
- Assembly
- GCA_002313205.1
- Location
- NNCF01128142.1:187419-199164[+]
Transcription Factor Domain
- TF Family
- NCU-G1
- Domain
- NCU-G1 domain
- PFAM
- PF15065
- TF Group
- Unclassified Structure
- Description
- NCU-G1 is a set of highly conserved nuclear proteins rich in proline with a molecular weight of approximately 44 kDa. Especially high levels are detected in human prostate, liver and kidney. NCU-G1 is a dual-function family capable of functioning as a transcription factor as well as a nuclear receptor co-activator by stimulating the transcriptional activity of peroxisome proliferator-activated receptor-alpha (PPAR-alpha) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-18 3.2e-14 52.2 0.0 2 74 43 110 42 112 0.93 2 2 9e-50 1.2e-45 155.6 0.0 137 307 107 287 103 290 0.86
Sequence Information
- Coding Sequence
- ATGATCCGCATTAGTGTCGTTTCGCTTTTCCTATTGTTTTCTGTTAAGGCGGAAGATTGGAGCAGGCAGATATTATCAGAGTTTAATCCAGGATGCCCGGATAATATATGTAATGGTACCATTAGTGTTGTTTATTCTCAAGCTAATGGGCCTAATGATACATTACATTACTTATGGGATCTCTCAAAAAAACCAAGCCTACTGCTTGCCCTCACTGCTCTTTCCACTAACCTGAGTATTGAATGGGGAAGATACGGGGAATCTTGTGCtcttaatttttctgaaaaaccaTCATACATATTTGGAGTGATTATAAACACTGTTACAGGATTTGGCTATTCTGATCACAGTAGCGTTTTACCTCATCTCCTGCATACACCCAACTCTACACAAGTAGATTTTGTGATAGATGGTTTATCAACTGAACCATCGTTTAGCAACTCCCGTTTTGCAGTGGAGCTGGTTCTTGTTGGATCTGATCAACCTGCCTCTAGTGTCcagattttggaaagaaaatgtttggACGACGAACATGCTCCAGGCGTGTTCagagcaAACTTTTGGCTCttggtGGATTTGGAGTCTCCAAGAAGTGCTCAAATGGCTGAAGGGGGCTACTTAGAATGGAGACCAGTCGCTTATATCTCACGTGTCCGTGAGTTATCGAACTCAACTGAAACTTTTATATACACTGCTCACAATGTATCCCACCCAGAAGAGTTGCTCAAAGGAAGTTTGATTCAGTCTGCGTTTTGTGTGAACGATTCAGTGTCAGTTGCACCTCTTGTGCAGGCGACAGCAGTTTCATTCGGCCTCAAGGAAGACGGCTTCTACCACAAAACAAAGTACACTGCGTGgtgCATTGGTCATGCCAAATGA
- Protein Sequence
- MIRISVVSLFLLFSVKAEDWSRQILSEFNPGCPDNICNGTISVVYSQANGPNDTLHYLWDLSKKPSLLLALTALSTNLSIEWGRYGESCALNFSEKPSYIFGVIINTVTGFGYSDHSSVLPHLLHTPNSTQVDFVIDGLSTEPSFSNSRFAVELVLVGSDQPASSVQILERKCLDDEHAPGVFRANFWLLVDLESPRSAQMAEGGYLEWRPVAYISRVRELSNSTETFIYTAHNVSHPEELLKGSLIQSAFCVNDSVSVAPLVQATAVSFGLKEDGFYHKTKYTAWCIGHAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -