Lko_01734-RA
Basic Information
- Insect
- Laupala kohalensis
- Gene Symbol
- Iswi
- Assembly
- GCA_002313205.1
- Location
- NNCF01126434.1:1963258-1966377[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-05 0.008 15.8 0.0 3 41 810 849 809 849 0.95 2 2 0.0048 3.5 7.4 0.0 3 21 912 931 910 934 0.90
Sequence Information
- Coding Sequence
- ATGTCCAAACCAGAAGAACCAGTGGATGGTGCTGAACCAGATGGAGAGACTGGAGAAAATTCGAACTCCTCATCTGCCGATACTGTGTCATCAAGAGACAAAGCGGAGGACTATGAAACGAAAGTCGTTTCTGATCGAAGTAAAAGATTTGAGTATCTTTTAAAACAAACAGagatatttactcattttatgtCTAATAGCCAAAACAAGACTCCCTCCAGTCCACTTAAAGCGAGACCAGGTCGTCCAAGAAAGATACAAAGTCAGCCAGAACAACCTCCCAGTATCAAAGGTGAACCAGTTGACCACCGTCACAGGAAGACAGaacaagaagaagatgaagagtTGCTTGCTGAAAGTAATACTAATCAGAAAACCATTATATCTTTTGACCAATCCCCTCCTTAcataaaaaatggagaaatgcGTGATTACCAAGTTCGTGGTTTAAATTGGATGATTTCActttatgaaaatggtattagtGGCATCTTAGCAGATGAAATGGGTTTAGGCAAAACTCTACAAACTATTTCTCTCTTAGGGTATATGAAACACTACCGCAACATTCCAGGACCACATATTGTGATAGTTCCAAAATCAACTTTAGCTAATTGGATGACCGAGTTTGAAAAGTGGTGTCCATCTCTTCATGCTGTTTGTTTAATTGGAGACCAGGAAACGAGAAATGCTTTTATCCGAGACACTTTAATGCCTGGAAAGTGGGATGTTTGTATTACATCTTATGAAATGGTTATTAAAGAGAAAAGTGTTTTCAAGAAATTCAATTGGAGATACATGGTAATTGATGAAGCtcacagaataaaaaatgaaaaatcaaaattgtcTGAGATAGTTAGAGAGTTTAAAACTACGAATCGACTTTTGTTAACTGGCACTcccttacaaaataatttacatgagtTGTGGTCGCTTCTGAACTTTTTACTTCCTGAAGTGTTTACATCATCAGAAGATTTTGATTCATGGTTTAACACTAACAGTTTCTTGGGTGACAATTCACTTGTTGAACGATTACACGCTGTTTtgagaccatttcttcttcgacGTTTAAAGTCAGAAGTAGAGAAAAGATTGAAACCTAAAAAGGAAGTCAAAGTGTATGTTGGTCTAAGTAAAATGCAAAGAGAGTGGTATACAAAAGTTTTGATGAAAGACATTGACATTGTTAATGGAGCAggcaaaattgagaaaatgagaCTTCAGAATATTCTTATGCAGCTTCGAAAGTGTACGAATCATCCATATCTCTTTGATGGGGCCGAACCTGGTCCACCGTATACTACTGACGAACATTTAGTTTACAACTGTGGTAAAATGGTGATTTTGGATAAACTTTTGCCACGTCTTCAGGAACAAGATTCGAGGGTTCTCATTTTCAGTCAAATGACCCGGATGTTAGATATCCTTGAAGATTATTGTCATTGGAAAGCATATAATTATTGCCGACTTGATGGTCAGACTCCTCATGAAGACCGGCAacgtcaaataaatgaatacaacGCTCCAGGCAGTGAGAAGTTCATATTTATGTTGTCAACAAGAGCTGGTGGTTTAGGAATCAATTTAGCTACTGCtgatgttgttattatttatgactCTGATTGGAATCCACAAATGGATTTGCAGGCGATGGACCGAGCTCACAGAATAGGTCAACAAAAGCAAGTAAAAGTTTTTcgttttattactgaaaatacaGTTGAAGAGAAGATTGTAGAACGTGCAGAAGTTAAACTCCGACTAGATAAATTGGTTATTCAACAAGGTCGCTTGGTGGATAATAAGCAAAACCAgttaaataaagatgaaatgtTGAATATGATTCGACATGGAGCAAACCATGTTTTTGCATCTAAAGACTCTGAAATAACCGAAGAAGATATTGATACCATCTTGATGAAGGGAGAAACAAAAACAGAGAATCTGAAACATAAGTTGGAAAATTTAGGTGAATCATCATTACGTAACTTTACTTTAGACACTGGTGCCACAGATTCTGTTTATCAGTTTGAAGGTGAAGACTATAGAGAAAAGCAAAAAGTTTTAGGGGTTGGTAGTTGGATAGAACCTCCCAAAAGAGAAAGGAAAGCTAATTATGCTGTAGATGCATACTTCAAAGAAGCCTTGCGAGTTGCTGAGCCTAAAGCTCCTAAAGCTCCACGACCTCCTAAACAACCTATTGTTCaagattttcagttttttccaCCTCGATTATTTGAGTTGCTAGATCAAGAGATATATTATTTCCGTAAAACTGTAGGATATAAGGTCCCTAAAAATCCAGAATTGGGTTCAGATGCCTCTCGTATTCAAAAAGAAGAACAGCGTAAAATTGACGATGCTCAGCCTTTGAGTGAAGAGGAAATTACGGAGAAAGAACAATTGTTAACGCAAGGATTCACCAATTGGACAAAACGTGATTTCAATCAATTCATTAAAGCTAATGAGAAGTATGGACGAGATGACATTGAAAATATTGCTAAGGATGTTGAGGGAAAGACTCCGGACGAAGTAATGGAATACAGCACAGTATTTTGGGAGAGATGTCATGAATTGCAAGATATTGATAGAATAATGGCACAGATTGATAGAGGAGAAGCTAAAATACAAAGACGGGCTAGTATTAAAAAAGCACTGGATGCCAAAATGGCGATGTATAGAGCACCATTTCATCAACTTCGCATTGCGTATGGGACAAATAAAGGAAAGAACTACACAGAAGAGGAAGACAGATTCCTTGTTTGTATGTTACACAAATTAGGTTTCGATAAGGAAAATGTATATGAAGAGCTCCGAGCATCAGTACGATCTTCCCCTCAGTTCCGATTTGATTGGTTTCTAAAATCTCGAAAAGCTATGGAACTGCAACGTCGTTGTAATACTCTCATTACATTAATTGAAAGAGAGAATCAAGAattagaggaaaaagaaagagcAGAAAAGAAGAAACGGGGTCCCCGAGGAAGTACAAATACATCTGGAGGAGTACCTGGTGCAAATACTGGCGGTggcaaaaatgttcaaaaacgaAAAAGTGAGAACATGTTGCTTGATAATAAAGTTtcttggaaaaagaaaaaaaacagtgaaaaatgA
- Protein Sequence
- MSKPEEPVDGAEPDGETGENSNSSSADTVSSRDKAEDYETKVVSDRSKRFEYLLKQTEIFTHFMSNSQNKTPSSPLKARPGRPRKIQSQPEQPPSIKGEPVDHRHRKTEQEEDEELLAESNTNQKTIISFDQSPPYIKNGEMRDYQVRGLNWMISLYENGISGILADEMGLGKTLQTISLLGYMKHYRNIPGPHIVIVPKSTLANWMTEFEKWCPSLHAVCLIGDQETRNAFIRDTLMPGKWDVCITSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPEVFTSSEDFDSWFNTNSFLGDNSLVERLHAVLRPFLLRRLKSEVEKRLKPKKEVKVYVGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLPRLQEQDSRVLIFSQMTRMLDILEDYCHWKAYNYCRLDGQTPHEDRQRQINEYNAPGSEKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVKVFRFITENTVEEKIVERAEVKLRLDKLVIQQGRLVDNKQNQLNKDEMLNMIRHGANHVFASKDSEITEEDIDTILMKGETKTENLKHKLENLGESSLRNFTLDTGATDSVYQFEGEDYREKQKVLGVGSWIEPPKRERKANYAVDAYFKEALRVAEPKAPKAPRPPKQPIVQDFQFFPPRLFELLDQEIYYFRKTVGYKVPKNPELGSDASRIQKEEQRKIDDAQPLSEEEITEKEQLLTQGFTNWTKRDFNQFIKANEKYGRDDIENIAKDVEGKTPDEVMEYSTVFWERCHELQDIDRIMAQIDRGEAKIQRRASIKKALDAKMAMYRAPFHQLRIAYGTNKGKNYTEEEDRFLVCMLHKLGFDKENVYEELRASVRSSPQFRFDWFLKSRKAMELQRRCNTLITLIERENQELEEKERAEKKKRGPRGSTNTSGGVPGANTGGGKNVQKRKSENMLLDNKVSWKKKKNSEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01510566;
- 90% Identity
- -
- 80% Identity
- -