Lko_33902-RA
Basic Information
- Insect
- Laupala kohalensis
- Gene Symbol
- -
- Assembly
- GCA_002313205.1
- Location
- NNCF01133829.1:70395-81124[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-09 7.5e-07 28.7 0.0 3 43 883 926 881 929 0.90
Sequence Information
- Coding Sequence
- ATGTCTCAATCTGATGCAAGTGATACAACAATTGATATAATAGATTCTGAAAATGATGCTAAAAGTGAACCTATACAAAATGCTCAAGTAAACATTGTGCATATTGAACCTTTGAATACAGAAACAAGTGTTATAGAAATTCCTGGTCAGGTACCTATGAATAGCACCGACGTagataaatcaattttgtattcattacCCTCAACTGGTGTGCATCACCTTGAAGATGTTAATAACTCCAGTTCAGGTGATGGCTTGGATATTGTTGAGGAGACTTTGAAAGTAGATGGAGATTTGACCAAAAAGGATGATTTGCTATGTGATGGAAAGTTAAAGACTAAACCTGTATCTTTGGTATGCGAGCCTGACATTGTGTGCTGTAAAGAATCTGATGATGATGGTCATCAAAAACTAACTGTAAAGAGTATTCAAAAACTAGCAACTACTTCAAAATTAGGAGTTGGTAAATCTTCAAAAACTGGAAAGcGGAAGAAAGATGAGCAAAGGGtcttgaagaaaggaaaaatgacTGGACAGTCTCCTCCAAAAGTTGCCAAAAAGAAACCTAAATCTGTCAGAGATCTGGAGAAAACTTTAAATTGTTTGCTATCAGATAGTGAACAAGTGAAAGATGAAAAAGCTTAtgCATTTGCCCAAGCCTATTTCATCAAAGTCACAGAAACACTTCTTGGGAAGGATGATGCAACTTACTCCAAATTCATGAAAACCATGAATAACTTTGGAGTGACTATTTTCGAAGCTACAGAACTTTTCAGGAGAGTGACTGAAATCTTTGAACATTATCCTGAATTAGGTGAAGAGTTTTTGGCATTTCTTCTTCCTGAGCAAGCGATGGAATGTGGGAAGTTTATGGAGTATATCATTCTGACAAAAATGAGAAGTTTCTGTCGGAAATTGGAGGTGTATTACTCAAAGCAACCTTCTCATCTGCACAAAATATATTCGAGTTTGGCTGCATTAGCTTCCAACAATGAAGCTACAGTGGACGATTTGCGAAATACAATTCTACCACTTCTGAAAAATAACTCACTTCTAGTCAATATGTTTCTTGAGTTAATGCCTACTGAAGCCCCTCACGCCAGtacATTGACTGATTACGAGTGCATGGACTTCAAAAGGGTGAATCTTCAAAACCCTAGTTCTGAAGACTGGTTCGAGACCATTGAAGTACCCGCTCCTGTTGAAGATAATATGTATGGTGGTGATGATTGCATATGTTCTTGTCATTTACCATCAGAGGACAACAAAAGGCAAACGAAGCATTGCGTGTCATGTGGAACTAAGTTTATCCACGGACGAGTGTATATACGTTCAGGAGGAATGCTTCATCCTGCTAAAATAACTTTCAATGAAATGAGATCTAAAGTTATTGATAGGCTTTCTATCAAAAATGTCAAACCAAGACAGAAAATTGGTAAAAACCAAACCCTTGCAACAGGCAACAAAAGAACTTCTGCCAAAAGTGAGAGCCCATCAACGTCTCCTCCGAAAACTGCAGCTAAAGCATCTTCGTCCAAGACATCCAAAAAGGGAAGCAAAGGAAAGACTATAATGGATCATCAAAAGGAAGTTGCTAGAGCCCTCGGTTCTAAGGGCTCGCATAAACGGAAAGCTGGCAAGGATCAGAATATTCCTAAACCACCTCGCAAAAGACTGAAAGCATTATCAAGTCTTGAGAATGATCCATGTGATCAGTTAGGTGAGTCTGGTCCATCGTCTTGCAAGAAAAATCTTTTGGGGGTTGGAAAAGCATTTGATGCAAAGTCTTCTAAGATAGATCTTGACTTTAAAGACGAGATCGATCCCCTTATGGATGTAAATGATACGGGTTTGCAGAACTCTGAGAGTCTCCTTTCTGTTACGTATTCTGATGCGTCTGCTGTTGGAGGTAAGATGTCTAAAGAAGAATTAGTGTCCTTCAAAGAGATATCTGAAAATGGAGCTCCAgagaacacacacaaaaactcgGAGGATTCTAGCGACTTGGGAGGGAGTGCTGGTTGTAAAACAGAGAAGGTTTCTGAAGAAGACGGTAATATTTCATCTAATACAGATTCTTGTAAAAAATCTCAAGTAGTTTCTTCACGTGTAGTTAAAAAAGAGACTAACACAGAAAACGATGTCAATGATCAAAAAGGCAGTAAAGTATCTGGCGATAAAGATGGGGAAATCCAATGTTTAAATAGAATAGTAAATGATAGTTCTGATGAAGAAGATCAAAATAACGGTTTAGACTGTGAGGATTATTTGGATGGGTGTTTTGAATGTCCGGAAACTGTGTACACCAGCGATGATAGTCCCGATCGTTCCTCAAAATTGGCGCAAAAATACAGACGAGAAAGTATTTCTTGTAGTGAAACTGAAGACAATGCATTTGAGAAGATTGAAACTACCGATGACAATATTACCTCTGAGGATGAAAGAAATATCTTGGATGAAGAGGATAGCCATTCAGATTCCTCCATAGAATCAAACAACAAAGAAAGCTCACAGATGGATGTCGATGACTTTACTGATGACTCTGACAGCTGCCCTAGTTCTCCTACGTCTGATATTGATGTTGATTCCGAAAGTGACCCAGTTTGTGACAAATCCGAATTTATTTCACTCGAAGATAGAGGTTGTTCTTGGACGAGAGacgaagataaaataattttgcgaaCTTTTCAGGCCGTTAATGGTTCTGACCAAGTATTCCAGAAAATATGTGAACAGCTACCATCTAGAACTGCTGAAGAGgtgAAGCTGAGATTTCAGGCTCTTATGTCATTTTTACAGAAGATTACTGTTGATcttgggatttaa
- Protein Sequence
- MSQSDASDTTIDIIDSENDAKSEPIQNAQVNIVHIEPLNTETSVIEIPGQVPMNSTDVDKSILYSLPSTGVHHLEDVNNSSSGDGLDIVEETLKVDGDLTKKDDLLCDGKLKTKPVSLVCEPDIVCCKESDDDGHQKLTVKSIQKLATTSKLGVGKSSKTGKRKKDEQRVLKKGKMTGQSPPKVAKKKPKSVRDLEKTLNCLLSDSEQVKDEKAYAFAQAYFIKVTETLLGKDDATYSKFMKTMNNFGVTIFEATELFRRVTEIFEHYPELGEEFLAFLLPEQAMECGKFMEYIILTKMRSFCRKLEVYYSKQPSHLHKIYSSLAALASNNEATVDDLRNTILPLLKNNSLLVNMFLELMPTEAPHASTLTDYECMDFKRVNLQNPSSEDWFETIEVPAPVEDNMYGGDDCICSCHLPSEDNKRQTKHCVSCGTKFIHGRVYIRSGGMLHPAKITFNEMRSKVIDRLSIKNVKPRQKIGKNQTLATGNKRTSAKSESPSTSPPKTAAKASSSKTSKKGSKGKTIMDHQKEVARALGSKGSHKRKAGKDQNIPKPPRKRLKALSSLENDPCDQLGESGPSSCKKNLLGVGKAFDAKSSKIDLDFKDEIDPLMDVNDTGLQNSESLLSVTYSDASAVGGKMSKEELVSFKEISENGAPENTHKNSEDSSDLGGSAGCKTEKVSEEDGNISSNTDSCKKSQVVSSRVVKKETNTENDVNDQKGSKVSGDKDGEIQCLNRIVNDSSDEEDQNNGLDCEDYLDGCFECPETVYTSDDSPDRSSKLAQKYRRESISCSETEDNAFEKIETTDDNITSEDERNILDEEDSHSDSSIESNNKESSQMDVDDFTDDSDSCPSSPTSDIDVDSESDPVCDKSEFISLEDRGCSWTRDEDKIILRTFQAVNGSDQVFQKICEQLPSRTAEEVKLRFQALMSFLQKITVDLGI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -