Basic Information

Insect: Laupala kohalensis
Gene Symbol: SMARCC2
Assembly: GCA_002313205.1
Location: NNCF01125939.1:84265-87021[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.4e-12 1e-09 37.9 0.1 3 44 579 620 577 622 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.4e-12	1e-09	37.9	0.1	3	44	579	620	577	622	0.95

Sequence Information

Coding Sequence: ATGTCAATTGCGGTGGCTCCTAGGAATGATGGTGGaccaatattgaattttttcaattcttcGGACTGTTTTTCCTCGTTTGATGGCATAAGATCATGGTTGCAGAGACATTGCAGAAAGGTTATGGAAACTGATCTTCCTCAGAATAAAGAACTAGCAACATTAGTGGTTCAGATGATTCAATTTCAGGATGATAATCTCGGGAAACAAGTCAATAAACCGCCCCTCACAAGATTACCTGTGCGATGTTTCTTGGATCTCAAAATCCGCGGTGCTCTCTGTCATATTTTGGCTACGGCGCTAAAATTCAAAACCGAGCAAGGATGGAGAAGATTTGATTTCTTGTCTCCTgcaagaaagaacaaaaatttggaaatgtttataaatatcgaaaaagtaTTGTTGCAACATAAGTTCATTTTTACACCTGTGGTGTACGTTCAACCAGAGGTGGAAAAGACTGAAGCGGCTAAAATTAGAGACATAATTAAGCGTCATGATGGTTTCATTACATACAACGAAAAGGAAGCTACTCATATTATTTACCCCTTGTGTGATCCATACGAGGAGGAGTACGTTCGACCTACTTTCAAACGTGGGCATATGGTGATGTTGCATTGGTACTACTTCCCTGATAGTCATAATTCGTGGGTTAACGTTGACTTCCCTTTTGAAATTCCGGAGTCAAATCCTAGGTCAGACCCTTGGAGGGTTTGTGCGTCGTGGGCGTTTGACATGGATCATTATAATGAATGGATGTCAGAAGAAGATTATGAAGTGGGTGAAAACGGTTCTAAAATAGTTAATAAGTTTCGTGTGAGTGTGGAGGAGCTTGTACCGTTGATGGATCCAGAGAAACAGAGGAGAAAGTCTTTGAGGAAGAGATCACCTTCTCCTCAACTTCGGCAGAGCAAAAGGAGAAGTGGACGAAGTCATATTGCAAATGCCACCAAGCGCTATAAGGATGAGCAAGTGATTAATCTTTGTGTATCAGATGATGTGGAAGTAGATGTTAAACTCTCTGAAGAGGTTGAATGTGCACCTTCCTGCTCAGCCCTTGCAGACAGCAACATAACTGTGGAATGCCTTTCTGTAAGTGTTCCAAGGGAAGatataaatgtagggaaaatTTCTGAACCTTTGCAAAACTCAGACttaaaaacttttgaaactcTTGCAAAAGAAAATTTCCCAGAAAATACTATTGTTGATCAAACTAATGTTATTGTAATCCCCAGTTACTCTGCATGGTTTGattacaattcaattcactcaGTTGAACGACGCGCTCTGTCTGAATTCTTTAATGGGAAAAATAAGTCTAAAACCCCAGAAATATACCTGGCTTACAGGAATTTTATGATAGATACGTATCGTTTGAATCCAAATGAATACATCACATCTACAGCATGCCGAAGAAATCTGGCTGGAGATGTTTGTGCCATAATGCGAGTTCATGCCTTCCTAGAACAGTGGggtttaattaattatcaagtcGATTCTGATTACTGCCCCACACCAATGGGACCTCCGTGTACATCACACTTCCAGATCGTATCTGATACTCCTTTGGGTCTTCAACCTATTCATCCATCAAAAACTCAACAACCTTTATCAGCGAAGACGATTGAACTGAACAAAATTGAATCAGTGAAGAAATCTCATGCGAGTTTTGGTCTAAAATTAGATCAATATcctcaaagaaaaaataagtgtGAAGGTAAAAGCACTCGCGAGTGGACTGATCAAGAAACTCTTCTTTTATTAGAAAGCATGGAATTGTATAAGGATGATTGGAATAAAGTGTCTCTTCATGTTGGAAGTCGCACTGTTGAAGAATGTGTGCTACACTTCCTTCGTTTACCCATCGAAGATCCTTACTTGGAAGATCATATCTCTTGTGGAATTCTAGGTCCATTGTCTTATCAACCTATTCCATTCAGTCAAATAGGTAATCCTGTGATGTCGACAGTTGCCTTCATCGCTTCTGTTGTAGATCCACAAGTAGCGAAAGCTGCAACTAAAGCAGCTTTAGAGAAGTTTTCTAAACTCAAGGAAGaaattcctttttctctcttgCAGAAATTGAAAGCAATTGACCATTCAAAAAAGTTTCTTCTGGATAACAAACAGAGGCCCAGCACGCAAGAGAGCTCTTGTAAGGAAAAGATTAGTAAGCAAAATAAATCAGAGGAAATGGAAAAGGAGGAGACAGAAAACGAGGAACAGATtgagaacaaaatgaagaaagagagCGGTGAGAAGCAGGAAGAAAAATCCAACACAAGTGATAGTACAGACAAACCAGAAGAGACAGAAAAAGATAACCACACTGAGAAGGACGCTCAGTTACAAGCTGCTGCTGCGGCTACTTTGGCCTCCGCTGCAGTGAAAGCAAGACACTTGGCTtcgatggaagaaaagaaaatgaaatcgtTGGTGAGTTATTTGGTTGAAACTCAATTAAAGAAGTTGGAGATGAAGCTGCATAACTTTGAAGAATTAGAGTCGACTCTGAACCGTGAAATTTCCTTCTTTGAAACTCAGAAGCAGCTGTTTCTTCAAGAACGTCAGCAATTTTGTATGGAACAAATAAAAGCTGCTGAAATTCAAGCCAAATTACTGGCGCAGCAACGGTATCTTCAAGAACAAGGTGTGGCTGCGTGGTGTCTCGCATCAGGACAAGCCGTTTCCATTCAGAATATTGTTCTGAGTTCCTCATTGAATTCTCCTGCCACATCAAGCATTGGGGATTGA
Protein Sequence: MSIAVAPRNDGGPILNFFNSSDCFSSFDGIRSWLQRHCRKVMETDLPQNKELATLVVQMIQFQDDNLGKQVNKPPLTRLPVRCFLDLKIRGALCHILATALKFKTEQGWRRFDFLSPARKNKNLEMFINIEKVLLQHKFIFTPVVYVQPEVEKTEAAKIRDIIKRHDGFITYNEKEATHIIYPLCDPYEEEYVRPTFKRGHMVMLHWYYFPDSHNSWVNVDFPFEIPESNPRSDPWRVCASWAFDMDHYNEWMSEEDYEVGENGSKIVNKFRVSVEELVPLMDPEKQRRKSLRKRSPSPQLRQSKRRSGRSHIANATKRYKDEQVINLCVSDDVEVDVKLSEEVECAPSCSALADSNITVECLSVSVPREDINVGKISEPLQNSDLKTFETLAKENFPENTIVDQTNVIVIPSYSAWFDYNSIHSVERRALSEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPNEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSDYCPTPMGPPCTSHFQIVSDTPLGLQPIHPSKTQQPLSAKTIELNKIESVKKSHASFGLKLDQYPQRKNKCEGKSTREWTDQETLLLLESMELYKDDWNKVSLHVGSRTVEECVLHFLRLPIEDPYLEDHISCGILGPLSYQPIPFSQIGNPVMSTVAFIASVVDPQVAKAATKAALEKFSKLKEEIPFSLLQKLKAIDHSKKFLLDNKQRPSTQESSCKEKISKQNKSEEMEKEETENEEQIENKMKKESGEKQEEKSNTSDSTDKPEETEKDNHTEKDAQLQAAAAATLASAAVKARHLASMEEKKMKSLVSYLVETQLKKLEMKLHNFEELESTLNREISFFETQKQLFLQERQQFCMEQIKAAEIQAKLLAQQRYLQEQGVAAWCLASGQAVSIQNIVLSSSLNSPATSSIGD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -