Lko_20057-RA
Basic Information
- Insect
- Laupala kohalensis
- Gene Symbol
- DNAJC1_1
- Assembly
- GCA_002313205.1
- Location
- NNCF01128925.1:343372-359856[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.38 2.8e+02 1.3 0.0 14 27 131 145 130 153 0.87 2 4 8.7 6.3e+03 -3.0 2.1 5 14 224 233 224 237 0.77 3 4 2.4e-05 0.017 14.8 0.0 2 34 283 318 282 329 0.86 4 4 2.7e-09 1.9e-06 27.4 0.0 2 43 372 418 371 421 0.85
Sequence Information
- Coding Sequence
- atGTCGCAGCTCCAAGAGAAGCTGGGTGAGCAACAGAACTTCCCCTTCAAGGAAGTTACCCTCTGTGCTGCAGGTACTGTAATAATTATACCAAAACACATGAAGTGGTTTCCATCATGGCTTTTAGTGATAAGCTGTATTCATGTATGCTATTCCTGGGATACAGACGATTACGAATTATTTGACTTGGTTGAAGAAGTCAACACAAACTTCTACTCTTTATTAGGCGTACCTCAGGATGCCAATTCTACTGAAATAAAGAAAGCATATCGTAAATTATCCCTTCTCTTGCATCCAGATAAAAACGATGCCCCAGATGCTGAAATTAAGTTCAGACAgTTGGTTGCAGTCTATGATGTCTTACGAGACAACAACAAAAGATCACGCTACAATTTGGTTCTTCAGAATGGTTTACCTGATTGGAGACATGTTGCTTTTTATTACAGAAGAGTACGGAAAATGGGTTTGGCAGAAAtgtctcttattttatttataatagtgacTGTTGGACAGTATGTTGTAGCGTGGGCTGCATATTTAGAGAAAAAGTACACTCTGGAGCAATTATGGGAAGCCAAAATGAAGAAACTTCAAAAAAAGCAACGTAAAGGCAAATATGAGGGCCCAGCCATTCCTGAGACTGTACCTGTTCATATTCCAACTCCCAGGtctgaagaagaagaggaagaaattaTAGAAGTTGAGCACAAAGGACCAAGACGACGTAAAGGAAAAAGTAACGCACCTCCAGAAGCCAATTCCTCATGGGAACCATCTTACTTGAGTGGTCAAAAAGAAGTTCATGAAAATTCAGCTGAAGTAGACAGACCACTTCCAGTATCAGGTGGCTTGTGGACAGATGACGATTTGGTAGAATTGGTTCGCCTCATCAAAAAATATCCTCCAGGCAGTTCAGCACGTTGGGAGAAAATATCCCAAACTATGCAGCGGCCAGTAGCTGAAGTAACACATATGGCAAAAAAAGTGAAGGAAGATGGATATAGAATTCGTGCTGCTGAAGATGGTATTTTAGGAAATGAAGGGGAAGATGAGAAACCTCGTAAGGTCAAAACCCGTGCTAACAAGGAAGATGACTCAAATGCTACAGATGTTGGTACTTGGAGTCAACCACAACAAAAGGCCTTAGAGGCTGCTCTTACCAAGTACCCAAAAGGAGGAGCTGGTGACCGGTGGGAGAAAATTGCGAAATGTGTTCCTGGAAAGTCAAAGgATGAGTGCATGCAAAGGTATAAACACCTAGTGGAAGTGGTCAAACGAAAAAAAGAGACTACTGACTCGATACCAATTCCAGAAAACACAGTTGCATGA
- Protein Sequence
- MSQLQEKLGEQQNFPFKEVTLCAAGTVIIIPKHMKWFPSWLLVISCIHVCYSWDTDDYELFDLVEEVNTNFYSLLGVPQDANSTEIKKAYRKLSLLLHPDKNDAPDAEIKFRQLVAVYDVLRDNNKRSRYNLVLQNGLPDWRHVAFYYRRVRKMGLAEMSLILFIIVTVGQYVVAWAAYLEKKYTLEQLWEAKMKKLQKKQRKGKYEGPAIPETVPVHIPTPRSEEEEEEIIEVEHKGPRRRKGKSNAPPEANSSWEPSYLSGQKEVHENSAEVDRPLPVSGGLWTDDDLVELVRLIKKYPPGSSARWEKISQTMQRPVAEVTHMAKKVKEDGYRIRAAEDGILGNEGEDEKPRKVKTRANKEDDSNATDVGTWSQPQQKALEAALTKYPKGGAGDRWEKIAKCVPGKSKDECMQRYKHLVEVVKRKKETTDSIPIPENTVA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00759216;
- 90% Identity
- -
- 80% Identity
- -