Lko_12258-RA
Basic Information
- Insect
- Laupala kohalensis
- Gene Symbol
- RCOR3
- Assembly
- GCA_002313205.1
- Location
- NNCF01126271.1:339376-367919[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2 8.4e+02 -0.2 0.0 25 41 47 66 40 69 0.78 2 3 9.5e-10 6.9e-07 28.8 0.0 3 46 127 170 125 170 0.97 3 3 4.4e-14 3.2e-11 42.7 0.0 3 46 385 428 384 428 0.98
Sequence Information
- Coding Sequence
- ATGGTTTTAGCTGATAGAAACTCAGAAACTGTTCGAAATGGGAGAAGATCTCGAGGACCTAGTCCAAATGGTCATGCATCGGATTCTAGCAGTGAAGAGGAAGCTGAAGAGAAGATCAGAGTTGGCCGAGATTATCAAGCTGTTGTCCCAGAACTTATTCCAGCAGCTGAGCGTCGTCCTGACCAATGTGCAGAAAGGGCATTGCTTGTTTGGTCTCCAACAGCAGAAATTCCTGATTACAAATTGGATGAATATATTTCCTTGGCTAAAGAGAAATATGGCTACAATGGTGAACAAGCTCTGGGTATGTTGTTCTGGCACAAGCATGACCTGGAGCGTGCTATCCTCGACCTGGCCAACTTCACTCCCTTCCCGGACGAGTGGACAGTTGAGGACAAGGTGCTCTTCGAACAAGCGTTCCAGTTCCATGGCAAGAGTTTTCATCGGATACGGCAAATGTTGCCTGACAAATCGATTGCCAGTCTGGTTAAGTACTATTACTCCTGGAAGAAAACTCGAAGTCGCACCAGTCTGATGGACAGGCAAGCCCGAAAACTGGCCATTCATCGAGAGGAAGGTAGCGAAGGGGGTTCAGAACTTGGATCCAACACTGACTCGGACTCTGATGAGAAGaaatggaCCATCCATCGGGGAATTCGTCGCAAGAGTGGTTCACCACCACGGCCTGCACAGAACAACGAGGAAGGTGCAACCCAGAAAGACGGAGGAGGCGCAGAGGGTGGGAAGAGCTCGTGTGCTAACTGTGGTGTGGCGTGTACCCACACCCACACCACACCTAAAGGCAGCATGTGCAACACCTGCTATCAGCATTGGAGACGCACGGGTAGTGTACGTCCCACCACGGGTCCTGTGAAACGCGACCGCCACTGCTTGACTATCCTCCGGCATAAACGCAAGCCACCTCGTGGGATGTACATCAACCACGATGACCTGGTAGCGATGGCTTCTTCACCGCCTTCACCAGCTCCTGGCGCACAAGGCGAGCAGATGCTCAAAGCCATGGATCGAGAGATCGTCTCTCTCAAGCGTCTTGTCCAGAATAATAAACAGAGTTTAAGTTCTTACAAAAGGAAAACTGCTGAAGGTATTGAAGAATTTCGTCCACAAGACTCCAATGTTCGTATTAATGCTCGTTGGACTAATGATGAGCTTTTACTTGCTGTACAAGGTGTCAGAAAGTATGGAAAGGACTTCAAAGCTATAGCAGAAGTTCTTGGCACTAAAACCGAAGCACATGTGCGCAGTTTCTTTGTGAACTATAGGCGTCGGTATAATCTTGATGCTGTGCTTAAAGAATTTGAAGCAGAGAATGGGCCAATTGTGGAGACCGATGAGAAAGAGGAGAAGaTGGAGGTAGATGGTGTCTCTTCTGGAAGTGAGGCGAGTACTCCCACTCCTGGCGCTAGCTCACCTGTGACAGTGGGTTCAAATACAAACTCCCCAAGCACTAAAGCGGGCTTTGCTAAGACACCTGTAGGGCCAGGTCAAGGGAGTAAATGA
- Protein Sequence
- MVLADRNSETVRNGRRSRGPSPNGHASDSSSEEEAEEKIRVGRDYQAVVPELIPAAERRPDQCAERALLVWSPTAEIPDYKLDEYISLAKEKYGYNGEQALGMLFWHKHDLERAILDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRSRTSLMDRQARKLAIHREEGSEGGSELGSNTDSDSDEKKWTIHRGIRRKSGSPPRPAQNNEEGATQKDGGGAEGGKSSCANCGVACTHTHTTPKGSMCNTCYQHWRRTGSVRPTTGPVKRDRHCLTILRHKRKPPRGMYINHDDLVAMASSPPSPAPGAQGEQMLKAMDREIVSLKRLVQNNKQSLSSYKRKTAEGIEEFRPQDSNVRINARWTNDELLLAVQGVRKYGKDFKAIAEVLGTKTEAHVRSFFVNYRRRYNLDAVLKEFEAENGPIVETDEKEEKMEVDGVSSGSEASTPTPGASSPVTVGSNTNSPSTKAGFAKTPVGPGQGSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00995150;
- 90% Identity
- iTF_00759215;
- 80% Identity
- -