Lko_02790-RA
Basic Information
- Insect
- Laupala kohalensis
- Gene Symbol
- ARID4B
- Assembly
- GCA_002313205.1
- Location
- NNCF01126256.1:457819-483754[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9 3.6e+03 -2.0 0.0 28 42 201 215 189 218 0.78 2 2 7.2e-12 1.4e-08 34.6 0.0 1 38 262 299 262 303 0.95
Sequence Information
- Coding Sequence
- ATGGAcatagttgatagagatcttctaccgcagggAGATGACCCCCCTTTCCTCACAGTTGGCACTGAAGTCAGTGCCAAATATAAGGGGGCATTCTGTGAGGCAAAAGTCCGAAAAGTTGTTCGCAGTGTTAAGTGCAAGATCACTTTCAAATTAGGATTGGGAACCCTTAATGTAACTGATGATCAAATTCGTGGAGGCACATTACGAGTTGGCTCTGTATGCGAGGTGAAACATCCTGATAAAAAGGAATTTGTTGAAGCAATTATCAACAAAATACAGGACTGTAGCCAGTATACTGTCGtatttGATGATGGTGATATAACCACTCTTCGGCGTACTGCATTATGCCTGAAGAGTGGGAGACATTTTGCGGAGAGTGAAACTTTGGATCAACTTCCTCTTACTCATCCTGAACACTTCAGTAATCCTGTAATTGGTGGGAGAAAAGGTCGTCGTAGCAGGCAAGCACAGGAGGACAGCAGTGATGAAGATGATGTTCCGAAAAaaggcaaaaagaaaaatgagaaagaagCTGATATTGGAAAGGTTGTTTTCACTGTTCCTAAGAAAGAAGCTACTGAATTTACCCGAGAAATTGGTAGCAAAGTAGACAACCATACACTAAAAGCAGCTGTGGAGAAAGCTCTGCAATACCTTGACAGGGATGAATTGCCGCCTCATTGGGATAGAGATCTTCTTTTTGGTCTTGATGAAAGCAGTGGAAATAGTGATAGTGATGGAGCTCTTGACTCAGATAGTTCAGATGATGAACCACGAGAAGAAAAAGATCATTTTGTTGCTCAGTTGTATAAATTTATGGATGACAGGGGTACACCCATTAATAGAGGTCCTACTATTGGGGCCAAAGATGTGGACCTTTATAAATTGTTTAAGtttaacaaaaaataa
- Protein Sequence
- MDIVDRDLLPQGDDPPFLTVGTEVSAKYKGAFCEAKVRKVVRSVKCKITFKLGLGTLNVTDDQIRGGTLRVGSVCEVKHPDKKEFVEAIINKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFSNPVIGGRKGRRSRQAQEDSSDEDDVPKKGKKKNEKEADIGKVVFTVPKKEATEFTREIGSKVDNHTLKAAVEKALQYLDRDELPPHWDRDLLFGLDESSGNSDSDGALDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINRGPTIGAKDVDLYKLFKFNKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -