Lko_02201-RA


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Laupala kohalensis
Gene Symbol
KDM5A
Assembly
GCA_002313205.1
Location
NNCF01127605.1:1014463-1021141[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.2e-21 6e-18 64.6 0.1 2 89 97 177 96 177 0.92

Sequence Information

Coding Sequence
ATGAATACCAATAGAGGTAATGTTCAAGATAAACATTCCAAACATTCTGGAATCGGAGACTTCAAGTTCCAAGTACCTGTTGAAGCTCCTGTTTTTGAACCAACAAAAGAAGAATTTCAAGATcctctgaaatatataaattctatTCGACATATTGCTGAGCTAGCTGGTATCTGCAAGATAAAACCACCTCCTGATTGGCAACCACCATTCGCTGTTGatgttgataaatttaaatttactccCAGAATTCAACGTCTGAATGAATTGGAAGCTAAAACAAggattaaattaaactttttggaCCAAATAGCAAAATTTTGGGAATTGCAAGGTTCCTCGTTGAAAATTCCTGTTGTTGAAAAGAAAGCATTAGATCTTTACACGTTAGTTCAAGATGAAGGTGGAGCAGAAGTAGtcacaaaagagaagaaatggagtaaaatttccatgaaaatggGTTTTAATGATGCAAAGGGACTGGGCAATTTATTGAAACATCATTATGAGCGTATTTTATATCCATATGATGTCTTTTGTAATGGTAAAGTGAAAGTGGAAAGTGATAGTAGTGAGAACAAAGATAAGGATTACAAACCTCATGGAATTCCTTCCAGACAGGCTATTAAGCCACCTCAAGAAAAGTACAGTCGTCGTTCGAAGAGGTATGATTCATCTGAATTCCCAGATGAGGAAAATCCTGATGATGAAAATTCTTCAAATGACAACAAAGAACTTCGAAGATTACAGTTTTATGGTGCCGGTCCTAAAATGGCTGGTTACCAAACGAAGAAAGAGGAGAAGCCTAAAAATAAAACTCGAGGAAAGAAAGTTAATTATGAATATGATCCTCTAGCCAAGTATATTTGTCACAACTGTGGTCGTGGTGATGTGGAAGAATGTATGTTACTTTGCGATGGTTGTGATGATAGTTATCATACATTCTGCCTTTTGCCTCCCCTTCCTGATATTCCTAAAGGTGATTGGCGTTGTCCTAAATGTGTGGCAGAAGAAGTCAGTAAACCTACAGAAGCTTTTGGTTTTGAACAAGCTCAAAGGGAGTACACATTGCAACAGTTTGGAGAAATGGCAGACCAATTTAAGTCAGATTATTTTAACATGCCCGTCCATTTGGTCCCTACATCTCTTGTTGAAAGAGAGTTTTGGCGAATAGTTTCATCTATTGATGAAGACGTGACAGTTGAATATGGTGCTGATTTGCATACCATGGATCATGGTTCAGGATTtcctacaaaaaattcaaatgggAAGATTTTTAATGTTGATCAAGTGTATGCTGAATCTGGATGGAATCTGAACAATTTGCCTGTTCTAGAAGGTTCTGTTTTGGGCCACATAAATGCTGATATTTCAGGGATGAAAGTTCCATGGATGTATGTAGGGATGTGTTTTGCCACATTTTGTTGGCATAATGAAGATCACTGGAGTTATTCAATCAACTATCTTCACTGGGGTGAACCAAAAACTTGGTATGGTGTTCCTGGAAATAAAGCAGAATGTTTTGAAGCTGCTATGAAGAAAGCAGCTCCCGAACTTTTTCAGTCTCAACCAGATTTACTTCACCAGTTAGTGACAATCATGAATCCAAACATTTTGATGGCTGAAGCCTACCAAGATATGTTTGAAATGGTAGAATGTGAAAAGAAGCTACGAAAATCACTTCTTGAGTGGGGTACAACTGAAGCCGAAAGAGAAGCTTTTGAACTTGTTCCAGATGATGAACGCcaatgtgaattttgtaaaaccACTTGCTTTCTCTCAGCTGTAACATGTACTTGCAGCCAAGACAAGTTAGCTTGTCTGAGACATTACACAAGCCTTTGCTCATGTCCACCAGACCAACATACACTCAGGTACCGATATACGTTAGATGAATTACCTGTTATGTTACACAAGTTGCGTATACGTGCTGATGCTTTTGATACGTGGATCGCTAATCTTCATGATAGCATTGATCCCAACACACCTAAGAAAGACTTGAGTACTTTGAAAGCTCTTCTTGAAGAagcccaagaaaaaaaatttgtaccaaCAGAGCTATTGGACTctgttcaaaaaattgtttcagagtCGGAGCGATATGCCAAAGTAGCTCAAGGTCTGTGCTTTAATAAAGTTAGAACTAGAAATAGGCAAGTTATGCAAGCAAAACCAAAGATAACAGTTGAAGAAATTCGTGCTTACGTTGGTAAAATGGAAAGTTTACCtgtaaatatgaaagaaacaacAGCAATGAAAGACTTGCTAAAAAGAGTTGAAACTTTTAAAGAAAGTTCTGAAGAGCTTCTGAAATCAGAATTTCCTTCATCGAAGGATCTAGCAGCATGTTTAGAATTAGGCTATGCCTTGGACATAGATGTCCCTGAAGTTCCTAGACTTAAAGAGTTTTACCAGCAGATGCAGTGGTTAGAAGAAGTTCAGTTTCATCGGACAGAACCAGATAAGTTGACAACAGAAGTTCTACGACAACTATTGGCATCTGGAATAGAGTTGGCTCCTCATCCCACAGTTGAAAAAGCTATGGGTGAATTGCAAGTTCTCCTAACAAATGTTGAACGATGGGAGGAAAAGGCTCGTCAGAATCTCCAAGCACATTCTCTTCTtcctattgaaaatattgaaaatattttactagaagcAGAGAGTATTTCAGCCCACCTCCCAAGCGTAATTCCATTGAAAGATGCTTTGAAGAAAGGTAAAGAATGGATTAAAAGGGTTGAAGAAGTGCAAAGTGCTGGAAATTTTCCATATGTTGACACTCTTGAAGATTTTGTTAGTCGTGGTCGATCCATTTCTGTACATTTAGATTCCCTTCCACAACTTGAGCAGCAGTTGCATAGTGCTCAAATGTGGAAGGATCGAACAGCTCGAACGTTCCTCCGCAAAAATTCTCATTACACTCTAATGGATGCTTTATCTCCTAGAGTTGCAGTAGGATTAGAAGCTCTGAAACTCAAGAAGCGTCGCTATCGAGAAGAAACTGAACATTCACGAATTTCTCACAGGAGTGCTTCTGGGAGTTCTTTATCGTACCTTGGAGCAGCTGCTGGCTCTCTTCGTGAAGTTAAGTTTTTATGTCCCAGTTGTTTGCGTTCCAGAAGACCCCGTCTGGAAACTATTTTGGCCTTGCTTGTTGCCCTTCAGAAAATTCCTGTTCGAATACCAGAAGGAGAAGCACTCCAATGTCTGACTGAAAGAGCGATGAATTGGCAAGATAGAGCAAGACAAGCTCTTGCTACAGATGAACTTGCTTCTGCTTTAGCGAAACTATCTGTTTTATCGCAACAACTTGTTGAAGCAGCTGCACGTGTAAAGactgaaaaaattatatcaagtgAATTAAATAAAGTTGCTGCTGCAGGAAACAAGATTGCAGAATTGCAGCGACATGAAAAAAATCATTCCTCTTCCACACAAAAAGGTGATTTGCCCTTAtctgaaaataaagttaaaagtatTGAGGGTGATATTCGTAATCAAGACAAATTTAACATCAGTCAAAGAAGCAGGTGTTCTTTAGATGATGGAGAAGACAATAGTGGTGGTAGCTGTGAAGAAAACAAGAatgaggaagaaagagaaagacaAATTTCTCAAACAAGTCCACCAGGAAGAGATGACGATGATGAGGTTTGCTATGAAGAGAATGCAAATGTGCACAGTACTTCTGAACATGCTTATTCTTCTGCTTCCCGAGTAGGAATTGTTGGTGGAAAGAAACATGTTCGCAAGACTCCTTTGGTTCCCAGACAATTAGAAGTTCCGGTACTTGCATTAAGTGAGAATGCTTGTCGTCAGTTAGAGGATTTAATGATGGAAGGTGATCTATTAGAAGTATCCCTGGATGAAACTCATCATATCTGGCGTATTCTTCAAGCTACGAGACCACACCATGATGATAGATTCCCTGATTTTGAAGACCTGGACAATGAAATGCAAGTAGAAAAattaaggaaggaaggaagagagcgccgtaaaggaaagaaaaagtcaTCTGAAGACCTTGACACCCAAAGTGGttcaaaaaagattaaaatttttgtttttaaagatgaAGACAAGTCTATTAAAAGACGTGATGGTAAGAAGAAATTCTGCCGAGAAATGGGTGATTCTTCCAAAAGAATGTCTCGTAAGGGTAAGCCTATTGCATCTGAAGCAGAGAAAAAGATTTCTGATCCTTCTTCTCATTCAAAACCTGAAAGCTCAGATGAAGATGAAGACTGTGCTGCTCCTACATGTTTACGTCCTACTGGGCATGAGGTGGACTGGGTGCAGTGTGACGGAGGTTGTGACATGTGGTTCCATCTGCATTGTGTTGGACTTGACAAACAAGATATCACTGAAGATGAGGACTACATATGTAAACGATGTTCTAATCCATTAGGTGAACCAGAACACAGTCAAGGAGATGTTGATATTTCACGAGTGAAAGTTGAACCTGCTAACACAGATGATAACATGGGATTAGATGGACTTATCACTTTAACTAATAGTGTTCCAAATAGTGCAAATAGTGAAATGGCAACTGAAGAGACTCTAGCTGTTAGTTCTGTGGACTGGGGATGTAGTAATTATGAAGATGCACAAGCTGTAGAGAATACAACTACTAGTAATAGTGGTCTATCTGATCAAACAGTGGCAATTGTTGCTGACACGGAAgCTCTAATACCTTTACCCTGA
Protein Sequence
MNTNRGNVQDKHSKHSGIGDFKFQVPVEAPVFEPTKEEFQDPLKYINSIRHIAELAGICKIKPPPDWQPPFAVDVDKFKFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPVVEKKALDLYTLVQDEGGAEVVTKEKKWSKISMKMGFNDAKGLGNLLKHHYERILYPYDVFCNGKVKVESDSSENKDKDYKPHGIPSRQAIKPPQEKYSRRSKRYDSSEFPDEENPDDENSSNDNKELRRLQFYGAGPKMAGYQTKKEEKPKNKTRGKKVNYEYDPLAKYICHNCGRGDVEECMLLCDGCDDSYHTFCLLPPLPDIPKGDWRCPKCVAEEVSKPTEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHLVPTSLVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKNSNGKIFNVDQVYAESGWNLNNLPVLEGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGNKAECFEAAMKKAAPELFQSQPDLLHQLVTIMNPNILMAEAYQDMFEMVECEKKLRKSLLEWGTTEAEREAFELVPDDERQCEFCKTTCFLSAVTCTCSQDKLACLRHYTSLCSCPPDQHTLRYRYTLDELPVMLHKLRIRADAFDTWIANLHDSIDPNTPKKDLSTLKALLEEAQEKKFVPTELLDSVQKIVSESERYAKVAQGLCFNKVRTRNRQVMQAKPKITVEEIRAYVGKMESLPVNMKETTAMKDLLKRVETFKESSEELLKSEFPSSKDLAACLELGYALDIDVPEVPRLKEFYQQMQWLEEVQFHRTEPDKLTTEVLRQLLASGIELAPHPTVEKAMGELQVLLTNVERWEEKARQNLQAHSLLPIENIENILLEAESISAHLPSVIPLKDALKKGKEWIKRVEEVQSAGNFPYVDTLEDFVSRGRSISVHLDSLPQLEQQLHSAQMWKDRTARTFLRKNSHYTLMDALSPRVAVGLEALKLKKRRYREETEHSRISHRSASGSSLSYLGAAAGSLREVKFLCPSCLRSRRPRLETILALLVALQKIPVRIPEGEALQCLTERAMNWQDRARQALATDELASALAKLSVLSQQLVEAAARVKTEKIISSELNKVAAAGNKIAELQRHEKNHSSSTQKGDLPLSENKVKSIEGDIRNQDKFNISQRSRCSLDDGEDNSGGSCEENKNEEERERQISQTSPPGRDDDDEVCYEENANVHSTSEHAYSSASRVGIVGGKKHVRKTPLVPRQLEVPVLALSENACRQLEDLMMEGDLLEVSLDETHHIWRILQATRPHHDDRFPDFEDLDNEMQVEKLRKEGRERRKGKKKSSEDLDTQSGSKKIKIFVFKDEDKSIKRRDGKKKFCREMGDSSKRMSRKGKPIASEAEKKISDPSSHSKPESSDEDEDCAAPTCLRPTGHEVDWVQCDGGCDMWFHLHCVGLDKQDITEDEDYICKRCSNPLGEPEHSQGDVDISRVKVEPANTDDNMGLDGLITLTNSVPNSANSEMATEETLAVSSVDWGCSNYEDAQAVENTTTSNSGLSDQTVAIVADTEALIPLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-