Lko_09075-RA
Basic Information
- Insect
- Laupala kohalensis
- Gene Symbol
- ARID5B
- Assembly
- GCA_002313205.1
- Location
- NNCF01127188.1:383250-386116[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-26 4.7e-23 81.0 0.0 2 89 41 126 40 126 0.95
Sequence Information
- Coding Sequence
- ATGGATCAGGATaGCAAACAACGGGCCTTAAATAGAAATGGTCTTAGATGTAACAATCTCAATCAGAAAAATGTATCTGAAGGGAAAGGCAGGAAAGTAGAGCGTGAAATATGTCCTGATGAGAAAGAGTTTCTGGTGAAACTTCATAGTTTCATGAAAAGTAGGCGCACCCCTATATCAAGAGTGCCTCATTTAGGTTTCAAAGAAAttgatCTATTTGCATTTTTCACTAAAGTTCAAAAGTTGGGTGGTTACAATAGTGTAACTGCTAATAGATTGTGGAAAACAATTTATGATGAATTGGGTGGCCACCAAGGCAGTACAAGTGCGGCTACTTACACAAGACGCCATTATGAAAGGTTATTATTGCCATATGAGAGAAGTGTCAGAGAGAGTGAAAATTCAAAAGACAAGAAAACTGGAGAAGGCAAATCATTGCCTTTGTGCAAGGTTGAGAAGTCTGAAGAGAATTTACCATCTGATAAGGAAAATATTCCTGTGTCCAATAGCTTGCCTAAGAGTTCGGGTAGTATATCAAGTAGTGGTACAAATGGTCCTAGTGATTTAGTCAATGGTTCAAGTAGTAGTGAAAACAACTCGGACAGTAATGCTTGCTCAACATCCAAGAATGGCAAAAAATCTTCAGAGAAAGTTCCTGAGCTCATTGATCTTGCTACTGAAGACCCTCACATGAAGATTGGAAAAACGTCTGTCCCTGTCTTTAAGAAACgtaaattggaaattttgaaagaaggCGGTCTTGAAGTAACTGCTATATCATCATTGGGATCAGAAACTTCAGTGACTCCAGTAGTTGAAAAACGTCCTTCAGTGATACAGCATACAGCACCAGTCCCTGTCCAGACTTCTGATCATCAAGTATCAATCACTGTCACTCCCGATGTTAGCCATCTTCTAGGATCAAGCTCTGCATCTGGTGACATGGGAGCCACTGCTACTCCAATCCCTCCATTTGATCCTTCTAATCCATCTGGTGTTCTAAACATTCAGgacttgaaacaaaaaatacaggcCCAACAAGTCTCAACTGCGTGGAGTCCTCCTAAAGTGGTACAGTCTCGTTCTATTTATACTCATTCTGAGAGCACTGTGTATGGAAATCCCAAAGATATTCTGGATCCATGTGCATTGCTCTTTGCAGAAAGAGCTTCTCTTGGACATATAATGACCCCTACAGAAGAAGAAGTGCTCGATTTGCGTGTGAAAAGTCCTCAGAAATCTTCCATAAGTGTGAATAGAGTTCAAGTGGCATCTTTTGATACACCCAAAAATTTGTCCAAAACTCACCCAAAAAACAACAGCTCGGGGTTCCCTCTTTTAGGTCGAGCTATTGTTGGATCGAATCTTGAAATAACTGTTGTAGATGTTCCAAAACCTTCTGCATCGAATCAAGTGCGGGTAAACACCCCAACACCTCAAAAACCTCAGCAGTCTGTCCGTAAAAATTCGAGCAAAGTGCCCCAGCGGTTACCACCTCGAAATGAGAACGGAAAATTTGTTTCTGCAAGCAGTGTGGCATCTACTGCCCCATCACATCGAAGTACAAGTAACCCCTCCGGGAGTGCGTCATTAATTATTCCTAACCCGTATCTCTCATCTGGACGAAGTACTCCATCTCTCTCATCTGGAAGAAGTACCCCATCTCTTTCATCGGGAAGAAGTACTCCATCTACCCGAACAAGAGTCTCACAAAGTCAGTCCTCTGTACCTACATCATCATCGagtattttacaatcatttttaccTGGAAATACCTCACTGTTTCCTAGCTTTCTTCCTCCCGTGACTGCAGCTAGTAACAGTGGGAAGAACAGTAATCCATTTCTAGCTCTTTCTGATCCAATGTATTATTCTTCCCTTTATAGTCAACATGGACTCTATCCTCCAACTCTGAATCCAGGATTTGTGTCTCCTCTGGTCACCCCCACTTTGATTCCACCTTCAGCTGAACAGATACAATTATATAAGGAACTTGTGAATCAACACCACAATAGTCTGAGGCTTGCCCATCAAGGAGCAGCCAACTTCCTGGGCCTTCCACGAGACGGATCAACATCTATTACTCCTGTTGGTCCCGCTGCCAATCCATCAACAAAGAGATAA
- Protein Sequence
- MDQDSKQRALNRNGLRCNNLNQKNVSEGKGRKVEREICPDEKEFLVKLHSFMKSRRTPISRVPHLGFKEIDLFAFFTKVQKLGGYNSVTANRLWKTIYDELGGHQGSTSAATYTRRHYERLLLPYERSVRESENSKDKKTGEGKSLPLCKVEKSEENLPSDKENIPVSNSLPKSSGSISSSGTNGPSDLVNGSSSSENNSDSNACSTSKNGKKSSEKVPELIDLATEDPHMKIGKTSVPVFKKRKLEILKEGGLEVTAISSLGSETSVTPVVEKRPSVIQHTAPVPVQTSDHQVSITVTPDVSHLLGSSSASGDMGATATPIPPFDPSNPSGVLNIQDLKQKIQAQQVSTAWSPPKVVQSRSIYTHSESTVYGNPKDILDPCALLFAERASLGHIMTPTEEEVLDLRVKSPQKSSISVNRVQVASFDTPKNLSKTHPKNNSSGFPLLGRAIVGSNLEITVVDVPKPSASNQVRVNTPTPQKPQQSVRKNSSKVPQRLPPRNENGKFVSASSVASTAPSHRSTSNPSGSASLIIPNPYLSSGRSTPSLSSGRSTPSLSSGRSTPSTRTRVSQSQSSVPTSSSSILQSFLPGNTSLFPSFLPPVTAASNSGKNSNPFLALSDPMYYSSLYSQHGLYPPTLNPGFVSPLVTPTLIPPSAEQIQLYKELVNQHHNSLRLAHQGAANFLGLPRDGSTSITPVGPAANPSTKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -