Lstr020898.1
Basic Information
- Insect
- Lathronympha strigana
- Gene Symbol
- kn
- Assembly
- GCA_949128165.1
- Location
- OX421911.1:12358990-12383311[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-53 1.8e-49 169.8 0.0 11 135 105 219 96 238 0.91
Sequence Information
- Coding Sequence
- ATGATCCTCACGAATCCGTTAATAAATTTGAAAAGATTCGATTCGCAATTCAAAAGCGGCGCGCTTCGCGTTCGTGCGGGTCCGGGAGTGTTCGCGGGTGTTTCGGGCCGGTTCGCGATTCGGTCGGACGAGCTGAACGCGGCGGCGGGCGGGTACTCGGGCTCGCCGTGGCCGCCGCTCGAGCTCGACCCGGTGGGATGGGGACGGAAGCTGTACCCGCCGGCCGCGCCGAGATCTTCagGGGGCCTGATGTTCGGCCTGCACCACCAAGACGCGGGCGGGCTGCACGCGCAGCCCCGCGGCCCGGTCACCTCGCTCAAAGAGGAACCGCTCACGCGCGCTTGGATGACACCCAGCTCACTAGTTGACAACACCAATACCGTGGGCGTCGGCCGCGCACACTTCGAGAAGCAGCCGCCGAGCAACCTGCGCAAGAGCAACTTCTTCCACTTCGTGGTGGCGCTGTACGACCGGTCCGGCCAGCCCGTGGAGATTGAGCGCACCGCTTTCATCGGCTTCATTGAGAAGGACCAGGAAGCTGAAGGCCAGAAGACAAACAACGGCATCCAATATAGGCTACAATTACTTTACGCGAACGGTATCAGACAAGAGCAAGACATATTTGTTCGACTAATAGACTCAGTAACCAAACAGcgacccaaaatgagtcttggcctccaacaCGACTGCCCTCCACTGACTCCGGTCCTGCGCAATTTGTCGCCAGTCTACAACCTGGAGTTCGCGAAAATCCTCGTCCACAACATCTGCCCATCTGTACCTAAGTCGACGGACCGGGCGGCGTGCTGTCGTTTTCATTCGCCCTAG
- Protein Sequence
- MILTNPLINLKRFDSQFKSGALRVRAGPGVFAGVSGRFAIRSDELNAAAGGYSGSPWPPLELDPVGWGRKLYPPAAPRSSGGLMFGLHHQDAGGLHAQPRGPVTSLKEEPLTRAWMTPSSLVDNTNTVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRSGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQRPKMSLGLQHDCPPLTPVLRNLSPVYNLEFAKILVHNICPSVPKSTDRAACCRFHSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -