Lstr000420.1
Basic Information
- Insect
- Lathronympha strigana
- Gene Symbol
- Jarid2
- Assembly
- GCA_949128165.1
- Location
- OX421901.1:4796718-4817498[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-17 7.7e-14 53.1 0.0 7 88 390 468 386 469 0.89
Sequence Information
- Coding Sequence
- ATGTATATACTGAACGGCAATTCAGAGGACTCAAAGTCGAGAATCGAAATAAAAATACTCGAAGAATACTTGGACGTGGAACCCACACAAATACAAACTCGGACAATCTCGGACACTGCAGAGACAGAATCCATTGAAACCAAATCGCAAATAAAAGTAGGAGATCGCGCGGAAGTCACAAAAACTAACCAATTGGAAGAGCCAAAACAGGAGGACCAATCAAAGATAACGGAAAAGGACAACAGCGAGAAAGCAGGACAGAGTGATGATAAGGGAAACGAGCAAgaggaacaaaagaaaagagtTAAAGGGAAGGGAGTGGGAAAGAAGACTGTGCCGAAAGAGACTCGGAACAGGAAACCAGCGGTGAAAGAAGTCAAAAAGACGCTGCCGAAACGGGCAGCCAAGGCCACTGCAGAGGAAACTCCGCCCACAAGGCTTCTGAGGAAcACAACAACTTCGCGCGACCCACCGCCAGCGCCCAACGCGGACGTATACGAGTTCGACGCCGAGCTGGAGGCCTCTCGGCCTCCCTCCGGCCTCCGCCGCCGGGGCCAGCCCACGCCCGACCCCGCCCCAGGCCCCTCAGCACCCAACACTGCCCCAGCGGGCCAAGAGGGCCAAGATGGCCAAGAGGGCCAAGATGGCGAAGAGAGCCAAGACTCCATAAAATACATGGACATATGTCCAATGAGCTCGCAACTTGTTAAGATCATCCCAAAGAAAGAGGAAGATGGGAACGCGGTGCTAAGCGTTAGCTTGGTACCCAAAGACGACATTTACATTAAACAAAAGAATTTTATAGACAACCTGAGTAACAGTCCAGCGCTCTTGACCAAATTGTTCAACTGTTTGCCGACCGAGTTGCAGAACGAGTTGGGCAATTTGGCGGCGGAAGGCAGTGCAAGGGAGGAGGCCTATTTGGAGGGGAGGGGCGGTTCGGTACTGGAGGCGCCCACGTTTTATCCCACGGCTGAGGAGTTTCAGGACCCCATAAAATACTACGACAAAATCGCCCCCGAGGCCTCTAAATACGGTCTGTGCAAGATTGTGCCGCCCGCCGAGTTCAAGGCCATGTGCAATATGAGCGACACCATCCGCTTCGCCGTTATATACCAGTACATCTCCAAGATGTACAGCCGCTGGGGGCCGGTGTCGCGCGAGCTGGCGGCCATCAAAGCGCACCTACGCACGCAGAGCGTCGTGTTCGCGCGCTCTCCCCTCTTGGACGGTAGCGAGGTGAACTTGCCCAAGCTATACCATGCCGTGGAGCGCAACGGCGGGCTCAGCAACGTCATACAGCGCAAGCGGTGGGGCCGCGTCGCCGACGAGATGAAGCTCACCAAGCTGCAGCATCCGGAGCGCAAGCTGGACCCGATATACATGCGGTACCTGCTGCCCTACGCCACGCTGTCCGACCAGGAACGCCAAAGCATAATGGCCGAAGTCGAGAAGTGCTGGACGACCAAGTACCAGAAGATGCTGGAGCGCGCCCGCAACCCGTTCCAGAGGCAGAGCCGCATGTTGGGCACCGAGTGCGAGTCAGAGTCCGACGACGAGGGCGAAGATGGCAACACTACCGGGGCGCTGCATGAGGCTGAGGACTGCATCGTGCAGGGCCGGACCATGAACCTGGTCACCTTCAAGAAGATCGCAACGTCGCTGATGGACGCTCACTTCGACCCGAGCAAGCAGCCGCCGGGGGCAGTCGACGTCGAGAAGGCTTACTGGCGTGCCGTGCTGTTGGGCACCGAACATATTGtggcGAATACGGCCTCCATCGATACGGGGGAGGAAGGCTACGGTTTCCCAAAAGACCCGCAGGCTGACTACGGCGCGCACCCGTGGAACCTCAAGGTCCTAGCACGGAACCCGAACAACGTGCTCCGCTACCTGGGCCCAGTGCTGGGCGTGACGGTGCCCACCCTGCACCTCAGCATGCTGTTCAGCACCTCGTGCTGGCACCGCGACCCCCACGGCCTGCCCTGGACCGAGTACATGCACTCCGGCGCTGAGAAGATCTGGTACGGCATCCCCCGTGACGAGAGCGCCAACTTCCGACGGGCAGTCGAGACCCTCTGCCCCGCCTACTGCCAGAACAAGTCCATCTGGCTCGCCTCGGAGATCACCATGGTCCCACCCAACATCCTCAGCGAACACGGAGTCAAGCTGTCCAGACTTCAACAGAAACCCGGGGAATATGTTCTGGTGTTCCCGGAGGCTCATTCGTGCTCCATCACAACAGGCTTCGGAATATCTGAGAGCGTCTACTTCGCTTCGAACGCTTGGCTGTCAAACGTATACAAACTATTCCAGGAGCTGCGTAACAGCTGCGAGCCGACCATGTTCTCGCTGGAGCAGCTTCTGCTCAACGGCAGCGCGGACCCGTCGGCCCCGCCCCGGGTGTGCTCCGTGCTGGCCACGCTGCTCGGCGCCGAGCTGGAtcaccgccgcgcgctcgaaCAGAAGGGGGTCAAGGTGCAAGAGCGTCCAGCGTCCTCTGCGCCCCTCAACACGTCCTACTTCCGAACCTGGAACACTCGCGAGCAAGACGAGTGTGAATATTGCCGGTCTACTCTTTTCCTTTCCAAGGTGACCGGCCTCACCGGCCGCAACTCCGCCGTGTGCCCCGAGCACGCGCTCCGGCTTCTCGATACCAAGAAATACAAAAACACGGACTTGAGCACGCTCGAATTCCTCTCGTCGTTCACCACGAGCGCGCTCGAGGAGATGCTCGAGCGGCTCGACACTCGCAGCGCCGAAGAGCAGAGCCGGGCGCCGTCGGTCATCGACCTCACGGGGCCGGAGCCCCCGGCGGCCGAATAG
- Protein Sequence
- MYILNGNSEDSKSRIEIKILEEYLDVEPTQIQTRTISDTAETESIETKSQIKVGDRAEVTKTNQLEEPKQEDQSKITEKDNSEKAGQSDDKGNEQEEQKKRVKGKGVGKKTVPKETRNRKPAVKEVKKTLPKRAAKATAEETPPTRLLRNTTTSRDPPPAPNADVYEFDAELEASRPPSGLRRRGQPTPDPAPGPSAPNTAPAGQEGQDGQEGQDGEESQDSIKYMDICPMSSQLVKIIPKKEEDGNAVLSVSLVPKDDIYIKQKNFIDNLSNSPALLTKLFNCLPTELQNELGNLAAEGSAREEAYLEGRGGSVLEAPTFYPTAEEFQDPIKYYDKIAPEASKYGLCKIVPPAEFKAMCNMSDTIRFAVIYQYISKMYSRWGPVSRELAAIKAHLRTQSVVFARSPLLDGSEVNLPKLYHAVERNGGLSNVIQRKRWGRVADEMKLTKLQHPERKLDPIYMRYLLPYATLSDQERQSIMAEVEKCWTTKYQKMLERARNPFQRQSRMLGTECESESDDEGEDGNTTGALHEAEDCIVQGRTMNLVTFKKIATSLMDAHFDPSKQPPGAVDVEKAYWRAVLLGTEHIVANTASIDTGEEGYGFPKDPQADYGAHPWNLKVLARNPNNVLRYLGPVLGVTVPTLHLSMLFSTSCWHRDPHGLPWTEYMHSGAEKIWYGIPRDESANFRRAVETLCPAYCQNKSIWLASEITMVPPNILSEHGVKLSRLQQKPGEYVLVFPEAHSCSITTGFGISESVYFASNAWLSNVYKLFQELRNSCEPTMFSLEQLLLNGSADPSAPPRVCSVLATLLGAELDHRRALEQKGVKVQERPASSAPLNTSYFRTWNTREQDECEYCRSTLFLSKVTGLTGRNSAVCPEHALRLLDTKKYKNTDLSTLEFLSSFTTSALEEMLERLDTRSAEEQSRAPSVIDLTGPEPPAAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00412307;
- 90% Identity
- -
- 80% Identity
- -