Lstr006028.2
Basic Information
- Insect
- Lathronympha strigana
- Gene Symbol
- osa
- Assembly
- GCA_949128165.1
- Location
- OX421902.1:34036852-34057802[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.8e-26 3.9e-22 79.7 0.0 2 89 316 400 315 400 0.94
Sequence Information
- Coding Sequence
- ATGTTTGAGTTCCTCAGCCATGATGTAGAGGAAAGTGCTTTCTCATTATTTGGAGTAACATGTTTATCTCGATTGTTTCAGGATCTGACCGGTCAGAATAGCAATGATTCGGGCGGCAGCGGGGGCGCGGGGCGCGCTTCGACGCCGCACCTGAGGCCGACGCCCAGCCCCACCGGCTCCAGCGGATCCCGCTCCATGTCACCGGCTGTCGGTACGCAGAACGTACCGATGCCGCCGCGGCCGTCGTCTTCTCTGTCGGACGGCAGCGGGCCGACGTCGCGccccggcggcggcgcggcgcccggGCCGGCGCCCAGCCCCGTGCCGCCGCCGGGCGCCATGGTAGCGCAGCAGTACCACCACGGCTACAAGCCCTACCCGCCGCAACCGTACGGCTACCCGCCGCGGAACCACCACCCCTACCAGTACGGCTACCGGCCGCAGCCGCCGCACCCGCAGCATCCGCCGCCTCATCCGCCGCAACATTACCCGCCGCTCAAACAGCAACAGCCCCGGCACATGGGCCCGCCGGGCTCGGCGCCGCCGGGCATGGAGGGCGCCATGCCGCCGCCGACGGCGCCGGGCGACTCGCACGACAAcgggcccgcgccgcccgccacgGCGCTCGTCACCACCGGGCCCGACGGCGCGCCGCTCGACGAGGGCAGCCAGCAGAGCACGCTCAGCAACGCCTCCGCAGCTAGCGGCGAGGAGCCGATCGGCACGCCCAAGCCGCGCAAGGACTTCGGGCCGGGCAGCGCGGCGCCGTCGCCGTCGCCGGGCGCGGGCTCGCACTCCTCCGCGCACGACGACTACGACGCGTCGCCCTCCTGGCCCCGCCCGCCCTCTAGTCCCGTGTTTAACAGTCACATACAGCCGGAGTCCTACAGATCAAAGAAGTCGGACTCGCTGGGCAAGCTGTACGAGATGGACGACGCGCCGGAGCGGCGCGGCTGGGTGGAGCGGCTGCTGGCCTTCATGGAGGACCGGCGCACGCCCATCGCCGCCTGCCCCACCATCTCCAAGCAGCCGCTCGACCTCTACCGCCTCTACCTGCTCGTGCGCGACCGCGGCGGCTTCGTCGAGGTGACGAAGAACAAGACGTGGAAGGACATCGCAGGGCTGCTGGGCATCGGCGCGTCGTCGTCGGCGGCGTATACGCTGCGCAAGCACTACACTAAGAACCTGCTCGCCTACGAGTGCCACTTCGACCGCGGCGGCATCGACCCGCAACCCATCATCAACCAGGTCGAGGCCTCCACCAAGAAGAAGGGCGGCAAGTCGAACGCCACCCCTCCGCAAGCCGGGTCGGGAAACTCGCAGGATTCGTTCgggggcggcggcgccggcgccgggcccgcgcccgcgcccatGGAGCCCTACCCCGCGCAGTACCCGCCCTacccgcccgcgcagcccaaCACCAGCCAAGGTACCCCACACTACCACTGCCACTACCCGGCCTCGTACGACACCCCCACACCACACACCACACCCTacccgcccgcgcagcccaaCACCAGCCAAGGTACCCCACACTACCACTGCCACTACCCGGCCTCGTACGACACCCCCACACCACACACCACACCCTacccgcccgcgcagcccaaCACCAGCCAAGGTACCCCACACTACCACTGCCACTACCCGGCCTCGTACGACACCCCCACACCACACACCACAGCCTacccgcccgcgcagcccaaCACCAGCCAAGGTACCCCACACTACCACTGCCACTACCCGGCCTCGTACGACACCCCCACACCACACACCACACCCTacccgcccgcgcagcccaaCACCAGCCAAGGTACCCCACACTACCACTGCCACTACCCGGCCTCGTACGACACCCCCACACCACACACCACACCCTacccgcccgcgcagcccaaCACCAGCCAAGGTACCCCACACTACCACTGCCACTACCCGGCCTCGTACGACACCCCCACACCACACACCACACCCTacccgcccgcgcagcccaaCACCAGCCAAGGTACCCCACACTACCACTGCCACTACCCGGCCTCGTACGACACCCCCACACCACACACCACACCCTacccgcccgcgcagcccaaCACCAGCCAAGGTACCCCACACTACCACTACCCGGCCTCATACGGCACCCCCACACCACACATATGCAATGTGTGA
- Protein Sequence
- MFEFLSHDVEESAFSLFGVTCLSRLFQDLTGQNSNDSGGSGGAGRASTPHLRPTPSPTGSSGSRSMSPAVGTQNVPMPPRPSSSLSDGSGPTSRPGGGAAPGPAPSPVPPPGAMVAQQYHHGYKPYPPQPYGYPPRNHHPYQYGYRPQPPHPQHPPPHPPQHYPPLKQQQPRHMGPPGSAPPGMEGAMPPPTAPGDSHDNGPAPPATALVTTGPDGAPLDEGSQQSTLSNASAASGEEPIGTPKPRKDFGPGSAAPSPSPGAGSHSSAHDDYDASPSWPRPPSSPVFNSHIQPESYRSKKSDSLGKLYEMDDAPERRGWVERLLAFMEDRRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKGGKSNATPPQAGSGNSQDSFGGGGAGAGPAPAPMEPYPAQYPPYPPAQPNTSQGTPHYHCHYPASYDTPTPHTTPYPPAQPNTSQGTPHYHCHYPASYDTPTPHTTPYPPAQPNTSQGTPHYHCHYPASYDTPTPHTTAYPPAQPNTSQGTPHYHCHYPASYDTPTPHTTPYPPAQPNTSQGTPHYHCHYPASYDTPTPHTTPYPPAQPNTSQGTPHYHCHYPASYDTPTPHTTPYPPAQPNTSQGTPHYHCHYPASYDTPTPHTTPYPPAQPNTSQGTPHYHYPASYGTPTPHICNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -