Basic Information

Gene Symbol
Kdm5
Assembly
GCA_949128165.1
Location
OX421922.1:227284-275626[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 4.3e-25 2.2e-21 77.3 0.0 2 89 101 184 100 184 0.93
2 10 0.01 52 5.6 0.0 73 89 209 225 194 225 0.83
3 10 0.01 52 5.6 0.0 73 89 250 266 235 266 0.83
4 10 0.01 52 5.6 0.0 73 89 291 307 276 307 0.83
5 10 0.01 52 5.6 0.0 73 89 332 348 317 348 0.83
6 10 0.01 52 5.6 0.0 73 89 373 389 358 389 0.83
7 10 0.01 52 5.6 0.0 73 89 414 430 399 430 0.83
8 10 0.01 52 5.6 0.0 73 89 455 471 440 471 0.83
9 10 0.01 52 5.6 0.0 73 89 496 512 481 512 0.83
10 10 0.01 52 5.6 0.0 73 89 537 553 522 553 0.83

Sequence Information

Coding Sequence
atgggaaaatgtgaCGAAGCTAATGTTGAAGTTAGTATGGGGGACTCAGCGTCCCCCATGAAACCTGATAATTTTACGTTCAGCGTGCCCCCGGAGGCGCCTGTGTTCGAGCCGACGCCGGAAGAGTTCCTGGATCCCCTGGCGTACATCAGCAAAATAAGGCCAATCGCGGAGAAGTCGGGAATATGCAAGATCAAACCACCTGCGCACTGGCAGCCGCCGTTTGCGGTGGATGTGGACCGCCTGCGGTTCACGCCGCGGATACAACGGTTAAATGAATTAGAGGCTATAACGAGGGTGAAGCTGAACTTCCTGGACCAGATCATGAAGTTCTGGGAGCTGCAGGGCTCCGTGCTCAAGATCCCCACCGTCGAGAGGAAGCCTCTCGACCTGTACTCCCTACACAAGATCGTCAAAGAAGCTGGTGGCTTCGACACATGTTCAGCGGAGCGCAAATGGTCGAAGATCGCACGGCGCATGGGTCACCCTCAGGGCAAGGGCATCGGCTCCATACTGAAGAACCACTACGAGCGTATCCTGTACCCATACGACGTGTTCAAGAGCAGCGGCGCCGCCGACAACAAGGAGACGGTGAGTTGGGCCCCGCAGTGCGGGCCAGAGGGCATCGGCTCCATACTGAAGAACCACTACGAGCGTATCCTGTACCCATACGACGTGTTCAAGAGCAGCGGCGCCGCCGACAACAAGGAGACGGTGAGTTGGGCCCCGCAGTGCGGGCCAGAGGGCATCGGCTCCATACTGAAGAACCACTACGAGCGTATCCTGTACCCATACGACGTGTTCAAGAGCAGCGGCGCCGCCGACAACAAGGAGACGGTGAGTTGGGCCCCGCAGTGCGGGCCAGAGGGCATCGGCTCCATACTGAAGAACCACTACGAGCGTATCCTGTACCCATACGACGTGTTCAAGAGCAGCGGCGCCGCCGACAACAAGGAGACGGTGAGTTGGGCCCCGCAGTGCGGGCCAGAGGGCATCGGCTCCATACTGAAGAACCACTACGAGCGTATCCTGTACCCATACGACGTGTTCAAGAGCAGCGGCGCCGCCGACAACAAGGAGACGGTGAGTTGGGCCCCGCAGTGCGGGCCAGAGGGCATCGGCTCCATACTGAAGAACCACTACGAGCGTATCCTGTACCCATACGACGTGTTCAAGAGCAGCGGCGCCGCCGACAACAAGGAGACGGTGAGTTGGGCCCCGCAGTGCGGGCCAGAGGGCATCGGCTCCATACTGAAGAACCACTACGAGCGTATCCTGTACCCATACGACGTGTTCAAGAGCAGCGGCGCCGCCGACAACAAGGAGACGGTGAGTTGGGCCCCGCAGTGCGGGCCAGAGGGCATCGGCTCCATACTGAAGAACCACTACGAGCGTATCCTGTACCCATACGACGTGTTCAAGAGCAGCGGCGCCGCCGACAACAAGGAGACGGTGAGTTGGGCCCCGCAGTGCGGGCCAGAGGGCATCGGCTCCATACTGAAGAACCACTACGAGCGTATCCTGTACCCATACGACGTGTTCAAGAGCAGCGGCGCCGCCGACAACAAGGAGACGGTGAGTTGGGCCCCGCAGTGCGGGCCAGAGGGCATCGGCTCCATACTGAAGAACCACTACGAGCGTATCTTGTACCCATACGACGTGTTCAAGAGCAGAGATGCCGCCGGCAACAAGCAGACAGGCAGCTTTATTTTAGTCGCCGACATACTGGCTTTGATCTGGGCGGTCCACCGATCTTACCGAGATGAGGAGCCTTTTACACAACTAGACGCTCTATGGACTCTCCATCTCGTCGGTACATGGGCCAAAGAAACCGAGGCTCCAAGCTTGCACAGTAGATTAATTATGTACAAGTGTATAATCTACTCGACTCTACTGCAACATGAAATCTCCCCGCAGAAAATCGAAGTGAAAGGCTCGCAGACCCCGGAGAAGGCGAGCCCGGCGCGGCCGGCCGGCCGCTCCGCGTCCAAGGGCCCCGCCGCCACCCCCCCGCCCGCGCGCCGCTTCAAGCCCGCCGAGCCCGAGCCGGCGGCCGAGGGCAGCCACACCGAGGGCGCGCTGGCCGGCGCCGACCGCGAGCCCAGGACACCCGTCAAGGAGGAAAAAGAGAACGGCGAGCAGAGGCGCAGTCCTCGCGAGAACAAGTGGATGTCGGCGGCGGGCAgctgcggcgcgcgcgcgcgcgggaCGCGCTCCACGCGCCTGCGCGAGCACCGCATGTCCAACATGACGGTGTCCGTCACCCCCGCGCCGCCCCTCCCCGCCCACCCCGCGCAGGAGGGCACGCTAGACCCGGTAACCTTGTCTCTCATGTTCGATATGACGCGCTCCACGCGCCTGCGCGAGCACCGCATGTCCAACATGACGGTGTCCGTCACCCCCGCGCCGCCCCTCACCGCCCACCCCGCGCAGGAGGGCACGCTAGACCCGGTAACCTTGTCTCTCATGTTCGATATGACGCGCTCCACGCGCCTGCGCGAGCACCGCATGTCCAACATGACGGTGTCCGTCACCCCCGCGCCGCCCCTCACCGCCCACCCCGCGCAGGAGGGCACGCTAGACCCGGTAACCTTGTCTCTCATGTTCGATATGACGCGCTCCACGCGCCTGCGCGAGCACCGCATGTCCAACATGACGGTGTCCGTCACCCCCGCGCCGCCCCTCACCGCCCACCCCGCGCAGGAGGGCACGCTAGACCCGGTAACCTTGTCTCTCATGTTCGATATGACGCGCTCCACGCGCCTGCGCGAGCACCGCATGTCCAACATGACGGTGTCCGTCACCCCCGCGCCGCCCCTCACCGCCCACCCCGCGCAGGAGGGCACGCTAGACCCGGTAACCTTGTCTCTCATGTTCGATATGACGCGCTCCACGCGCCTGCGCGAGCACCGCATGTCCAACATGACGGTGTCCGTCACCCCCGCGCCGCCCCTCACCGCCCACCCCGCGCAGGAGGGCACGCTAGACCCGGTAACCTTGTCTCTCATGTTCGATATGACGCGCTCCACGCGCCTGCGCGAGCACCGCATGTCCAACATGACGGTGTCCGTCACCCCCGCGCCGCCCCTCACCGCCCACCCCGCGCAGGAGGGCACGCTAGACCCGGTAACCTTGTCTCTCATGTTCGATATGACGCGCTCCACGCGCCTGCGCGAGCACCGCATGTCCAACATGACGGTGTCCGTCACCCCCGCGCCGCCCCTCACCGCCCACCCCGCGCAGGAGGGCACGCTAGACCCGGTAACCTTGTCTCTCATGTTCGATATGACGCGCTCCACGCGCCTGCGCGAGCACCGCATGTCCAACATGACGGTGTCCGTCACCCCCGCGCCGCCCCTCACCGCCCACCCCGCGCAGGAGGGCACGCTAGACCCGGTAACCTTGTCTCTCATGTTCGATATGACGCGCTCCACGCGCCTGCGCGAGCACCGCATGTCCAACATGACGGTGTCCGTCACCCCCGCGCCGCCCCTCACCGCCCACCCCGCGCAGGAGGGCACGCTAGACCCGGTAACCTTGTCTCTCATGTTCGATATGACGCGCTCCACGCGCCTGCGCGAGCACCGCATGTCCAACATGACGGTGTCCGTCACCCCCGCGCCGCCCCTCCCCGCCCACCCCGCGCAGGAGGGCACGCTAGACCCGGTAACCTTGTCTCTCATGTTCGATATGACGCGCTCCACGCGCCTGCGCGAGCACCGCATGTCCAACATGACGGTGTCCGTCACCCCCGCGCCGCCCCTCACCGCCCACCCCGCGCAGGAGGGCACGCTAGACCCGGTAACCTTGTCTCTCATGTTCGATATGACGCGCTCCACGCGCCTGCGCGAGCACCGCATGTCCAACATGACGGTGTCCGTCACCCCCGCGCCGCCCCTCACCGCCCACCCCGCGCAGGAGGGCACGCTAGACCCGTTAGCCAAATACATGTGCCGCGTGTGCGGGCGAGGCGACATCGAGGAGCAAATGCTTCTCTGTGACGGCTGCGACGACTCCTACCACACATTCTGCCTCGTCCCGCCGCTCGCCATTGTGCCTAAAGGCGACTGGCGCTGCCCGGTTTGCCTCGCAGAAGAGGTATCAAAACCTGCGGAGGCGTTCGGCTTCGAGCAGGCGTCGCGAGAGTACACGCTGCAGCAGTTCGGAGAGATGGCCGACCAGTTCAAATCGGACTACTTCAATATGCCCGTACATATGGTGCCAACCCCGACAGTGGAGAGAGAGTTCTGGCGAGTCGTGTCGTCGATAGACGAGGATGTGACCGTGGAGTACGGCGCGGATCTGCACTCTATGGACCACGGATCTGGTTTCCCGACAAAATCAAGCGCGCACCTATACCCCGGCGAGCAGCAGTACGCCGAGTCCAGTTGGAACTTGAACAACCTGCCCGTGCTCGAGGGCTCCGTGCTCGGACACATCAACGCCGAcatatcagggatgaagGTCCCGTGGCTGTACGTGGGCATGTGCTTCGCGACGTTCTGCTGGCACAACGAGGACCACTGGAGCTACTCCATCAACTACCTGCACTGGGGCGAGCCCAAGACCTGGTACGGCGTGCCCGGCTCCAAGGCGGAGCAGTTTGAAGCCGCCATGAAGGCTGAGGCCCCCGAGCTGTTCCAGCTGCAGCCAGACCTGCTGCACCAGCTCGTCACCATCATGAACCCGAACATCCTCATGCGCGCCGGAGTCCCAGTCTACAGGACGGACCAGCGCGCCGGCGAGTTCGTGATCACGTTCCCGCGCGCCTACCACGCCGGCTTCAACCAGGGGTACAACTTCGCCGAGGCCGTCAACTTCACGCCCGCGGACTGGTTAAAAATGGGGCGGGAATGCATCGCGCACTACTCGACGCTGCGGCGTTACTGCGTGTTCTCGCACGACGAGCTGGTGTGCAAGATGGCGCTCTCCCACGACGCGCTGAACATGAACGTGGCTCTCGCTGCGTATAGAGACATGAGGACCATGCTGCACGATGAGAGGAGGCTGAGGAAAGCGTTGTTAGACTGGGGCGTGACGTCAGCCGAACGCGAAGCCTTCGAGCTGCTGCCCGACGACGAGCGCCAGTGCACGCTCTGCAAGACCACGTGCTTCCTGTCGTGCGTCACCTGCGCGTGCGCACGCCGCGTCGCCTGCCTGCGCCACTACGACCAGCTGTGCGGCTGTCCCGCTCGCACGCACACGCTCAGGTCGTCCTTGTCGCTCCAGGGCGTGCTGACCCTGCTGTCGTGCGTCACCTGCGCGTGCGCACGCCGCGTCGCCTGCCTGCGCCACTACGACCAGCTGTGCGGCTGTCCCGCTCGCACGCACACGCTCAGGTCGTCCTTGTCGCTCCAGGGCGTGCTGACCCTGCTGTCGTGCGTCACCTGCGCGTGCGCACGCCGCGTCGCCTGCCTGCGCCACTACGACCAGCTGTGCGGCTGTCCCGCTCGCACGCACACGCTCAGGTCGTCCTTGTCGCTCCAGGGCGTGCTGACCCTGCTGTCGTGCGTCACCTGCGCGTGCGCACGCCGCGTCGCCTGCCTGCGCCACTACGACCAGCTGTGCGGCTGTCCCGCTCGCACGCACACGCTCAGGTCGTCCTTGTCGCTCCAGGGCGTGCTGACCCTGCTGTCGTGCGTCACCTGCGCGTGCGCACGCCGCGTCGCCTGCCTGCGCCACTACGACCAGCTGTGCGGCTGTCCCGCTCGCACGCACACGCTCAGGTCGTCCTTGTCGCTCCAGGGCGTGCTGACCCTGCTGTCGTGCGTCACCTGCGCGTGCGCACGCCGCGTCGCCTGCCTGCGCCACTACGACCAGCTGTGCGGCTGTCCCGCTCGCACGCACACGCTCAGGTCGTCCTTGTCGCTCCAGGGCGTGCTGACCCTGCTGTCGTGCGTCACCTGCGCGTGCGCACGCCGCGTCGCCTGCCTGCGCCACTACGACCAGCTGTGCGGCTGTCCCGCTCGCACGCACACGCTCAGGTCGTCCTTGTCGCTCCAGGGCGTGCTGACCCTGCTGTCGTGCGTCACCTGCGCGTGCGCACGCCGCGTCGCCTGCCTGCGCCACTACGACCAGCTGTGCGGCTGTCCCGCTCGCACGCACACGCTCAGATACCGCTACACCCTCGACGAGCTGCCAGCGATGCTAGAGAAGCTCAAGAAGAAGACGGAGACGTTCCGCGAGTGGGCGGAGTCCGTACAGAACGCCCTCGACCCCGACACGCCCAAGACCTGCGACCTGGACGGCCTCAGGGCGCATCTCAGGAGGTCCATTGAACTTAAGCGGGCGTGGGATGATGTGGGCTGCAAGGCCACGTTGAACTTACTTGTGGCTAATGCTTCTGGGGTGACCGATCGTGCAAGACTGCTGGCGGTGTCACGGCCAGAGTCAGGGGCATGGCTGCAGGCGTTGCCATCGCCTCAATTGGGCACGCTATTGGACGGCGACTCGTTGCGAGTGTCCGTTGCGCTCCGCCTGGGCTGCGATGTATGCCAACCTCACATATGCATTTGCGGTTCCATGtcgGGCTGCTCGAGACAGCCCCAGCTTAGACGCcgcccagccagccagccagccagccagccagccagccagctcCGCAGCACCAGCGAACGCAAACCCGTCAAATGGGAAGCCAGTGCACCAACGTCAAGAAAGAAGCACGCCACGTCAAGAAGCAGTAGCCACGATAATGCGCAATACCAACAAGGCAGAGCAGAGCGTCTAGGAAGAGCCTCAGCCCCACCGCTACTACCCAGCACCTGCAGCGCGTCACCAGCACTAGAGCCGTCGCTACTACCACCCCCAGTGTCCAACAACGACCATATGATGTTAAGAGGTACAATATAA
Protein Sequence
MGKCDEANVEVSMGDSASPMKPDNFTFSVPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIMKFWELQGSVLKIPTVERKPLDLYSLHKIVKEAGGFDTCSAERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKSSGAADNKETVSWAPQCGPEGIGSILKNHYERILYPYDVFKSSGAADNKETVSWAPQCGPEGIGSILKNHYERILYPYDVFKSSGAADNKETVSWAPQCGPEGIGSILKNHYERILYPYDVFKSSGAADNKETVSWAPQCGPEGIGSILKNHYERILYPYDVFKSSGAADNKETVSWAPQCGPEGIGSILKNHYERILYPYDVFKSSGAADNKETVSWAPQCGPEGIGSILKNHYERILYPYDVFKSSGAADNKETVSWAPQCGPEGIGSILKNHYERILYPYDVFKSSGAADNKETVSWAPQCGPEGIGSILKNHYERILYPYDVFKSSGAADNKETVSWAPQCGPEGIGSILKNHYERILYPYDVFKSRDAAGNKQTGSFILVADILALIWAVHRSYRDEEPFTQLDALWTLHLVGTWAKETEAPSLHSRLIMYKCIIYSTLLQHEISPQKIEVKGSQTPEKASPARPAGRSASKGPAATPPPARRFKPAEPEPAAEGSHTEGALAGADREPRTPVKEEKENGEQRRSPRENKWMSAAGSCGARARGTRSTRLREHRMSNMTVSVTPAPPLPAHPAQEGTLDPVTLSLMFDMTRSTRLREHRMSNMTVSVTPAPPLTAHPAQEGTLDPVTLSLMFDMTRSTRLREHRMSNMTVSVTPAPPLTAHPAQEGTLDPVTLSLMFDMTRSTRLREHRMSNMTVSVTPAPPLTAHPAQEGTLDPVTLSLMFDMTRSTRLREHRMSNMTVSVTPAPPLTAHPAQEGTLDPVTLSLMFDMTRSTRLREHRMSNMTVSVTPAPPLTAHPAQEGTLDPVTLSLMFDMTRSTRLREHRMSNMTVSVTPAPPLTAHPAQEGTLDPVTLSLMFDMTRSTRLREHRMSNMTVSVTPAPPLTAHPAQEGTLDPVTLSLMFDMTRSTRLREHRMSNMTVSVTPAPPLTAHPAQEGTLDPVTLSLMFDMTRSTRLREHRMSNMTVSVTPAPPLTAHPAQEGTLDPVTLSLMFDMTRSTRLREHRMSNMTVSVTPAPPLPAHPAQEGTLDPVTLSLMFDMTRSTRLREHRMSNMTVSVTPAPPLTAHPAQEGTLDPVTLSLMFDMTRSTRLREHRMSNMTVSVTPAPPLTAHPAQEGTLDPLAKYMCRVCGRGDIEEQMLLCDGCDDSYHTFCLVPPLAIVPKGDWRCPVCLAEEVSKPAEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTPTVEREFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKVPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNILMRAGVPVYRTDQRAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECIAHYSTLRRYCVFSHDELVCKMALSHDALNMNVALAAYRDMRTMLHDERRLRKALLDWGVTSAEREAFELLPDDERQCTLCKTTCFLSCVTCACARRVACLRHYDQLCGCPARTHTLRSSLSLQGVLTLLSCVTCACARRVACLRHYDQLCGCPARTHTLRSSLSLQGVLTLLSCVTCACARRVACLRHYDQLCGCPARTHTLRSSLSLQGVLTLLSCVTCACARRVACLRHYDQLCGCPARTHTLRSSLSLQGVLTLLSCVTCACARRVACLRHYDQLCGCPARTHTLRSSLSLQGVLTLLSCVTCACARRVACLRHYDQLCGCPARTHTLRSSLSLQGVLTLLSCVTCACARRVACLRHYDQLCGCPARTHTLRSSLSLQGVLTLLSCVTCACARRVACLRHYDQLCGCPARTHTLRYRYTLDELPAMLEKLKKKTETFREWAESVQNALDPDTPKTCDLDGLRAHLRRSIELKRAWDDVGCKATLNLLVANASGVTDRARLLAVSRPESGAWLQALPSPQLGTLLDGDSLRVSVALRLGCDVCQPHICICGSMSGCSRQPQLRRRPASQPASQPASQLRSTSERKPVKWEASAPTSRKKHATSRSSSHDNAQYQQGRAERLGRASAPPLLPSTCSASPALEPSLLPPPVSNNDHMMLRGTI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-