Lory005938.1
Basic Information
- Insect
- Latheticus oryzae
- Gene Symbol
- gata5-a
- Assembly
- GCA_030157265.1
- Location
- CM058051.1:4632355-4638233[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-17 2.9e-14 52.3 2.4 1 35 292 325 292 326 0.97 2 2 8.9e-18 1.5e-14 53.2 4.8 1 35 349 382 349 383 0.98
Sequence Information
- Coding Sequence
- ATGGAGCAAAAAGAATCTTCTCCATCAACTGAAACAAAATCTACTGGAGAAGAATCTCCAGCTGAACCAGAACAACCGCCTCCAACAGTGATTCGAAGATCAATGAGACAAGTGATAACAACTGCTGGAACTATCGAGGAAAATATCGATGACTCTCAGATTGAGCAAATTGCTGGTGAGGAAGTCGTAAAATCGACGGATTCGCCAGTTCAGCAAACTCAGGATGGGGAAAGTACTTCGCAAATGACTCATTACGAAGAACAAGCATCATCTGAACAAAATTATGAAGAAACTGCACAACAAGTTTATATAACTGAAGCTGTTGTAACAGAAGGGTATTCGACGACTGAATATGATGGCACGCATCATGTCACTTACACTACTCTTGAAATGCCTTCTAATTCTTCTATTACTATTGAACAACAACAGACGTATACAGACATGGATAGTGTTAGTAGTTCTCAATTTGCTGCACAGTATGGTAATGATGCCACACCATACATACAACCGCAACACTACCAAACTACGTATCATGAGTATTCAGTCGAAAGAACTGGAGATGAAAGCCCCCAGTCCGCTCTCTTCAGAGATACTGATCCAAATCTTGCCTCATCTAGATATCAgCCGTATGAGGTGTCTAACCCCGGTGTTAATAATAACCAAGTGACTTTAATAAGTTCCAATGGGACATTCCAATTCACTCCTCATAACAACGTTTGGCAAACTCCAAACACCAGTGAATATTCATATCAAGGGAATATGACTCTGCATCAACCTGATGGTACTCAGAATTATGCAAATGTTCAAAATTGGACGACATCTCCAGTTGAGGATGGTACAAGACCACAGTATCGAGAGGTACATATCAAAGAATGCGTGAATTGCGGTGCCAGTGTAACACCGCTTTGGCGTAGAGACGGTACCGGGCACTATCTATGTAATGCTTGCGGTCTGTATAACCGGATTAACGGTGTTAATAGACCACCGGTGAGGCCTACCAAAAAACCGCAGGCGCCGTCTGGACCTAGGAGAACTGGTGTCGTTTGCGCTAACTGCAAAACTGGTAGTACCACACTTTGGCGCAGGAACAATCAAGGAGAACCTGTATGTAACGCTTGTGGATTATACTTTAAATTACATGGTGTTAATCGGCCTCTGAGTATGAAAAAAGAAGGAATTCAAACTCGCAAAAGAAGACCTAAAAATTCAACACACCAACAACCAGGTCCAAGTACTAGTCAAAACATTGGGAACAGCAGAATGGtgattCAAGGCTACTTCCCACCAAATAGCATCCAACCTGACATTACTGATCAGTATCAGTTGCCAGTgcattttcaatcaaatcaattCCAGAGATTGCCAGGAGCTGATCAGTTGACACGCCAGATTCCAGCAAATGTAGCTCCATTAGAGCCTATTCAGGTGACACAAAACGATGAACAAACTAGCGTTATTACTTCTACACCACAAAACTCAAGATACCATCATCACGATAACGAAGACAAAGAACGCAACGcctaa
- Protein Sequence
- MEQKESSPSTETKSTGEESPAEPEQPPPTVIRRSMRQVITTAGTIEENIDDSQIEQIAGEEVVKSTDSPVQQTQDGESTSQMTHYEEQASSEQNYEETAQQVYITEAVVTEGYSTTEYDGTHHVTYTTLEMPSNSSITIEQQQTYTDMDSVSSSQFAAQYGNDATPYIQPQHYQTTYHEYSVERTGDESPQSALFRDTDPNLASSRYQPYEVSNPGVNNNQVTLISSNGTFQFTPHNNVWQTPNTSEYSYQGNMTLHQPDGTQNYANVQNWTTSPVEDGTRPQYREVHIKECVNCGASVTPLWRRDGTGHYLCNACGLYNRINGVNRPPVRPTKKPQAPSGPRRTGVVCANCKTGSTTLWRRNNQGEPVCNACGLYFKLHGVNRPLSMKKEGIQTRKRRPKNSTHQQPGPSTSQNIGNSRMVIQGYFPPNSIQPDITDQYQLPVHFQSNQFQRLPGADQLTRQIPANVAPLEPIQVTQNDEQTSVITSTPQNSRYHHHDNEDKERNA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -