Lory000050.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Latheticus oryzae
Gene Symbol
Zfx
Assembly
GCA_030157265.1
Location
CM058048.1:257961-270424[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 51 0.055 4 8.0 0.4 1 23 60 83 60 83 0.91
2 51 0.00035 0.025 15.0 1.3 1 21 88 108 88 111 0.88
3 51 0.36 26 5.5 3.5 1 23 117 140 117 140 0.95
4 51 0.00047 0.034 14.5 0.5 1 23 146 168 146 168 0.97
5 51 0.00021 0.016 15.6 1.1 1 23 174 197 174 197 0.98
6 51 0.00027 0.02 15.3 4.6 1 23 208 230 208 230 0.97
7 51 8.1e-06 0.00059 20.1 1.2 3 23 238 258 237 258 0.98
8 51 9.9e-05 0.0072 16.7 2.5 1 23 264 286 264 286 0.97
9 51 7.9e-05 0.0058 17.0 3.3 1 21 292 312 292 313 0.95
10 51 2.1 1.5e+02 3.1 1.6 1 23 333 356 333 356 0.83
11 51 0.00042 0.031 14.7 1.1 2 23 362 383 361 383 0.95
12 51 0.0023 0.17 12.4 0.3 1 23 389 411 389 411 0.98
13 51 3.7e-06 0.00027 21.2 0.6 2 23 418 439 417 439 0.96
14 51 2.5e-06 0.00019 21.7 1.1 1 23 444 466 444 466 0.97
15 51 4e-05 0.0029 17.9 0.9 1 23 475 498 475 498 0.97
16 51 0.0061 0.45 11.0 1.3 1 23 505 527 505 527 0.96
17 51 6.1e-07 4.5e-05 23.6 3.3 1 23 533 555 533 555 0.99
18 51 0.00016 0.011 16.0 3.4 1 23 561 583 561 584 0.94
19 51 0.0066 0.48 10.9 0.8 3 23 591 611 589 611 0.96
20 51 0.0048 0.35 11.3 5.8 3 23 619 639 617 639 0.97
21 51 0.00026 0.019 15.4 0.5 1 23 645 668 645 668 0.96
22 51 0.00028 0.021 15.2 0.3 1 21 674 694 674 695 0.95
23 51 0.05 3.6 8.2 0.2 2 23 715 736 714 736 0.93
24 51 2.1e-05 0.0015 18.8 2.3 1 23 768 791 768 791 0.97
25 51 3.6e-05 0.0026 18.1 2.7 3 23 798 818 796 818 0.97
26 51 0.0045 0.33 11.5 0.2 1 23 827 849 827 849 0.97
27 51 0.00021 0.016 15.6 0.5 3 23 858 879 856 879 0.93
28 51 1.1e-07 8.4e-06 25.9 0.2 1 23 885 907 885 907 0.98
29 51 0.022 1.6 9.3 0.1 1 20 921 940 921 944 0.95
30 51 3.5e-05 0.0025 18.1 1.5 1 23 950 972 950 972 0.99
31 51 3.8e-05 0.0028 18.0 1.4 2 23 979 1000 978 1000 0.97
32 51 1e-05 0.00075 19.8 2.1 1 23 1006 1028 1006 1028 0.97
33 51 2.3e-06 0.00017 21.8 1.0 1 23 1034 1056 1034 1056 0.98
34 51 0.0011 0.082 13.3 1.3 1 19 1062 1080 1062 1080 0.98
35 51 0.0055 0.4 11.2 0.6 1 20 1101 1120 1101 1122 0.92
36 51 0.0044 0.32 11.5 4.4 1 23 1126 1148 1126 1148 0.96
37 51 2.1 1.5e+02 3.1 1.0 1 21 1284 1304 1284 1305 0.94
38 51 0.0095 0.7 10.4 0.6 3 23 1313 1334 1312 1334 0.95
39 51 0.012 0.88 10.1 1.7 3 23 1340 1360 1339 1360 0.97
40 51 0.02 1.5 9.4 4.7 1 23 1366 1389 1366 1389 0.96
41 51 2.6e-06 0.00019 21.6 1.4 1 23 1394 1416 1394 1416 0.98
42 51 0.00029 0.022 15.2 0.9 1 23 1426 1448 1426 1448 0.98
43 51 0.00011 0.0079 16.6 1.3 2 19 1454 1471 1453 1471 0.97
44 51 0.011 0.8 10.2 0.5 1 23 1482 1505 1482 1505 0.96
45 51 0.00012 0.0086 16.4 0.7 1 23 1511 1534 1511 1534 0.95
46 51 9.4e-05 0.0069 16.7 1.4 1 23 1539 1562 1539 1562 0.96
47 51 0.015 1.1 9.8 0.9 2 23 1573 1591 1573 1591 0.78
48 51 0.15 11 6.7 0.0 2 23 1598 1620 1597 1620 0.95
49 51 0.00033 0.024 15.0 1.6 2 23 1627 1649 1626 1649 0.95
50 51 0.023 1.7 9.2 3.0 1 23 1663 1685 1663 1685 0.97
51 51 0.0023 0.17 12.4 6.7 1 20 1692 1711 1692 1713 0.94

Sequence Information

Coding Sequence
ATGAAACCGAAAACTCGTTTGAAAAAACGCACACTTAAAGATGTTAAAACAATGAAATGGACTTGTATGATTTGTACGGATGTTAAAGAAGATAAACAAAGTTTAATCGAACATTATGAGTTTCATAAAAACGAAACTGAAAGTCTTGGATTGGGTGACCATTCAAGTGGGGATTATTTCCTCTGTCCTGTTTGTCTCACTGATTTCACTTCTTTGAAAAGCTACGAAAAACATGTGGAAAATCAACATGGCGAAAAACATTTTGCTTGTGATGAAtgcaacaaatttttcaaaaattcataccAACTATCAGTACATAATTATAACGTTCATACTACTGACGAAATCTATCGTTGCATTCTTTGCCCTTTTACTAGTAAACATCTGAAGAGTTTACGCACTCATATCAAAAGCAAACACGACGATGAGTTTAAATATCGCTGTCAGATTTGTAATCGCGGTTTTGCTTCTGCTTCTTGGTACGAAgaacataaaaactttcacACAGGAGCAATGCCTTTTGAATGTGAAATCTGCTTCAAAAGTTTCCCATATACGCGCTATTTAATAGCGCATAAGAAAACTATGCATCCGGAAATTCAATCTGTATCGCCTGTAACTCATGAATGCGAAATTTGTCATAAACGATTTGCGCATAAGAAAAGTCTGGTTTTGCATGTTAGAGGTCATACTGGCGAGAATACAGTTTTGTGTGAAATGTGTGGCAAGAGTTTGTCTAGTTCCGAACATTTGAAACAACATATAAGAATACATACAGGGTATAAACCGCATATTTGTTCGGTTTGTGGTAAAGGATTTGCGAAGAAATGTAATTTGACTTTGCATGAGAGAGTACATAGTGGAGAAAAACCATATTGTTGTGTTACTTGTGGGAAATGTTTCTCGCAAAGATCGACGTTGGTTATACATCAGAGaTTATCACAACGAACCATAAAACTAGAAGACGATGAAGATTCCAAAATTCGCAAACGCCAATACGTTtgtaaattatgtaatttaaaatttccatcAATTCGTATTTATCGAATCCATCATAAAGAAACGCACAGTCTTAAACCACTCAATTGTTACGTttgtaaaaaacaatttaaatatcaATGGACTTTGAACaaacatttagaaattcaCACCAATgctaaaacttattattgtgACATTTGCGAAGAAAATTTACCAAGTTTTCAACAGTTGAAAGAACATCAACGTGTCCATAACATTCCATCAGCTTTAGTTTGTCCCGAATGTAAGAAAGTATTTGCTTCAAGATCATCATTCCGCAAACATCGTCTTATTCATAAAGGTGTCCGTTTTCCTTGTGACATCTGCAAGAAGACATTCAGTGATCCAAGCACACTCAAACtccattcaaaaaaacacGAAGCTGATTTCATCCAACCGAGTTACCAATGCACAATTTGCGATAAAATTTATATCGTTGAATACAATCTTAAAAATCATATAGCGAGTTGTCATAGCGGCGAACGGAAATCGCATATTTGCGAAACTTGCGGTCGGAATATGTCATCGCGGAAGAGTTTAAGAGATCATTTAATGATCCATACAAACGAACGACCATACAAATGTGATAAATGTGAGAGAAGTTTTCGGAGAAAAGAACAATTAAATGATCATTATCGTACTCATACGAAAGAAAAACCACACGTTTGTGAATACTGTAATCGTGCTTTTACTATGCGGAAGAATTTAAAAGAACATGTGAGTGTGCATCATGAAGGTAAACGACATTTGTGTGATATTTGTGGTAAGGAAATGGCATCAGCGACGAGTTTAATGAATCATAAGAAGACTCATACTGGAGAGAAACCATTTGGGTGTTCGTTTTGTGGAAAACGATTCACGAAGAAGTACCATCTACAGTGTCATATTAATGTACATACAAAAGAAAAACCGTATGCTTGCAAGTTTTGTGATAAGAAATATACACAAGGAACGTCTTTGCAATTGCATATTCGGGCTGTACATAGTGGAGAAAGACCTTATGTTTGCGATATTTGTACAAAGGGATTTATTACTAAAACGCTTTTAACAATGCATCGAAAACAAGAATCTCTTCTTTATAAACTACTGACACGTCGACAGCGACCTAAATCCCATCCTGTGTCTTGTCCAATCTGTTCCAAAACTATATCTTCGCGCAGTCTTTATCTCCATTTAAGAAGAATCCATGAAAATAATCCCAAACAAAAATGCCGATATTGTGACTACCAAGGTTACTATGTGCGTCAACATATCCAATCTGTCCATCTTCGCAACTACTCTTACAAATGTAAACAATGCGGTAAAGGTTTCTATAATTCAAGATCATTCAAAAACCATCTTGAAGTCACGCATGAAGATAAAACAGTCATTTGTCCACATTGCAAAAAACAATTCCGAGACAAATACTACTATAAAGAACATATACAAAAACATGCCGATGGATTTGTTAAAGATTCATACATTTgtgaaatttgttcaaaacCTGTAACCGGTAAACAGTCGTTTAGAGCTCATGTTAAGCAACATTGCCAAAATGACGAGCCACaaatttgtgaattttgtGGAAAGACTTTTAGGAACAAGCAGGCGTTAGATGCACATAAAAAAGGATTGCATGGTACTGTGAAGAATTTTGTTTGTGAAAAGTGTGGTAAAGCGTTTGTTACAAGTGTGAATCTCAAGGTGCATTTACGAGTGCATACGAAAGAAAAACCATACAAATTGACAAATTGCGTTGTTTACATTTGTGAAGTATGTCTCAAGGAGTTTCAAACTTATGTCGAGTTAATTCGGCATATTCCATTGTATCATCCTATTGggcattattttaaatgtgaTTATTGTCCAAAAGTTTTACGTTCAAAATATGGATATTCGCGTCATATAAATCGTCATTTTGCTTTCAATAGAAAAGTTTGTGACGAATGTGGTAAATTGTTCAAATCTTTAGACACTCTCCGCAACCATAAAAAAACCCATTCTGGTGAAAAAACCCACATGTGTGAGTTATGTGGTAAAGTGTTTACACGTCGCCAATTCTTAACTTTACATCTTCGAATCCATACCAACGAAAAACCATACGAATGTAAAGCTTGTGGTAAAAAATTCGGTCAAAAGTCGTCTTTAAGTGTCCATATGAGATACCATCTAGGTCAAACTCCTCATAAATGTTCCATTTGTAAACGTGGCTTTGTTACAAAATCATTAATGAAAAGACATTGTttttttgtttcgATTCTAATTTGTTTCGTTTTCAGATCGGAAGCAATGGACGTGAGCTATCTTTGCAACATCTGTACTGAAGAATTCCCGGATAagtcaacatttttaaaacatcaTGAAAGTGGCGAAGTTTTTAAATGTTGTAAATGTGACGCCACTTTTAGTACAACTTCAGATTTATATCAACATTTTGATAGTCATTCTGAAGAAACTGTTGTGATTCAAGATGACAATGAAATTGTCGAAGAAGTTTATTTGAGTTATGATAACGATCAAGAGATTGAAAACAATGAGCTTTTATATGTTCTCGATGAATCGCAAGGTATTAATGAAGTCGTAGTTGAAGGTGTTAACACTattcagaaaaagaaaaaagttgatgATTTCGCGATTGTTCAACTCGAACATGGGTACGTAATTCCGAATGAAGAAACTGAAGATGGCAGTTTAGATGGTAAACAGAAGGTTCTTCAACCGTCGACAAGTAAATTAGTTTATCAATCGCGTCCAAGAGCTCCGCAACCCAAACGCAGACATGTTATGCCCGATTTTTCATCAGCGAATTATCAGTTTGTGAATGCGAATGAGGAAGTTGATATTCCTCATTACAAATGTATGCGATGtgaacaattatttataagtAAGTTTGTATTTTATCGACATATCGAAAAAGGAAAATGTTATATTAATAATTGCGATATGTGTAATGCTACTTTTAGTAAAAACAGtgagttttattatcattattcaGTCGAACATACTGATCGAgctatttgtaatttttgtttccgGACTTTTATGTATGAGAAGAATGTTAAAGAACATATGATGAGGCATTTGGATCAGTTTAGACATAGGTGTGAACAATGTAATAAAGGATTTTATACAATAAGAGAGTATAGGAACCATTATAAGAATAGACATATGGGAATTAGGCATAAGTGCGATGTTTGTGGCAGAAGTTTTGCTGatgaatattattttagaaGACATATAGCTACGCATGAGCAAGCACTCAtctttaaaaaagaatttcgTTGCGATTTATGCGACAAGTCTTATGGACTTAAACCTCAACTAACTAAACATCGGATTCGGCATTTCCCGCCAACAATAAAATGTCCAAAATGCGACAAAAGTTTTTACTATAATTACTCTTTAAGAAAACACGATTTTTTCGTTCATTCTTCTATCGAACGCTACAAATGTAAACTTTGCGATTATACAGCCAAACGCTTATTGTCTTTAGACAACCATATGGTACGTGTGCATACAAAAGAGTTCCCATACATTTGTACCAACTGTGGAAAAGGTTACtctaaaaaaatccaattgaAAACCCACACCGAATCAGTGCATCAAGGTCTAGAACACATTTGCGAACAATGCGGCAAAGGATTTAAATACACGTCTGGATTATAtcaacatataaaaaaaatccatgaaggcaaaattgttaataaaccTTTAGAAGAATGTCCAATTTGTGGTAAAAGTTTCCGGTATTTGAAAGAGCATTCAAAAACACATGACAAAACTCGGACTGTAGTTTGCGATTTATGTGGGAAGACTTTAGCTGCTGAGACTTATTACGAGCAACATGTCCAACGTGTCCATACGAATATTCGGCCTTTGAAATGTCTGGTTTGTAGTAAAGGGTTTATACGCAAAGAAGATTTGCGGAAACATTTTATGAAGAAACACGAACGGCCGAAGTTGCcgatttttaatgaaaagaaACGATTTGAGTGTCGATTTTGTAAGAATCGTTTTACTACGAaaggatttttgaaaattcatgaaCAGAACCATAATGAAGACAGGAAAGCTTATTGTTGTGAATTTTGTGAAAAGACTTTTAGATATAAATCCAATTTGAATCAACATAAATGTGAAGTCAGAAGTAGGGAATTACAAGAtgtgtttttcaaataa
Protein Sequence
MKPKTRLKKRTLKDVKTMKWTCMICTDVKEDKQSLIEHYEFHKNETESLGLGDHSSGDYFLCPVCLTDFTSLKSYEKHVENQHGEKHFACDECNKFFKNSYQLSVHNYNVHTTDEIYRCILCPFTSKHLKSLRTHIKSKHDDEFKYRCQICNRGFASASWYEEHKNFHTGAMPFECEICFKSFPYTRYLIAHKKTMHPEIQSVSPVTHECEICHKRFAHKKSLVLHVRGHTGENTVLCEMCGKSLSSSEHLKQHIRIHTGYKPHICSVCGKGFAKKCNLTLHERVHSGEKPYCCVTCGKCFSQRSTLVIHQRLSQRTIKLEDDEDSKIRKRQYVCKLCNLKFPSIRIYRIHHKETHSLKPLNCYVCKKQFKYQWTLNKHLEIHTNAKTYYCDICEENLPSFQQLKEHQRVHNIPSALVCPECKKVFASRSSFRKHRLIHKGVRFPCDICKKTFSDPSTLKLHSKKHEADFIQPSYQCTICDKIYIVEYNLKNHIASCHSGERKSHICETCGRNMSSRKSLRDHLMIHTNERPYKCDKCERSFRRKEQLNDHYRTHTKEKPHVCEYCNRAFTMRKNLKEHVSVHHEGKRHLCDICGKEMASATSLMNHKKTHTGEKPFGCSFCGKRFTKKYHLQCHINVHTKEKPYACKFCDKKYTQGTSLQLHIRAVHSGERPYVCDICTKGFITKTLLTMHRKQESLLYKLLTRRQRPKSHPVSCPICSKTISSRSLYLHLRRIHENNPKQKCRYCDYQGYYVRQHIQSVHLRNYSYKCKQCGKGFYNSRSFKNHLEVTHEDKTVICPHCKKQFRDKYYYKEHIQKHADGFVKDSYICEICSKPVTGKQSFRAHVKQHCQNDEPQICEFCGKTFRNKQALDAHKKGLHGTVKNFVCEKCGKAFVTSVNLKVHLRVHTKEKPYKLTNCVVYICEVCLKEFQTYVELIRHIPLYHPIGHYFKCDYCPKVLRSKYGYSRHINRHFAFNRKVCDECGKLFKSLDTLRNHKKTHSGEKTHMCELCGKVFTRRQFLTLHLRIHTNEKPYECKACGKKFGQKSSLSVHMRYHLGQTPHKCSICKRGFVTKSLMKRHCFFVSILICFVFRSEAMDVSYLCNICTEEFPDKSTFLKHHESGEVFKCCKCDATFSTTSDLYQHFDSHSEETVVIQDDNEIVEEVYLSYDNDQEIENNELLYVLDESQGINEVVVEGVNTIQKKKKVDDFAIVQLEHGYVIPNEETEDGSLDGKQKVLQPSTSKLVYQSRPRAPQPKRRHVMPDFSSANYQFVNANEEVDIPHYKCMRCEQLFISKFVFYRHIEKGKCYINNCDMCNATFSKNSEFYYHYSVEHTDRAICNFCFRTFMYEKNVKEHMMRHLDQFRHRCEQCNKGFYTIREYRNHYKNRHMGIRHKCDVCGRSFADEYYFRRHIATHEQALIFKKEFRCDLCDKSYGLKPQLTKHRIRHFPPTIKCPKCDKSFYYNYSLRKHDFFVHSSIERYKCKLCDYTAKRLLSLDNHMVRVHTKEFPYICTNCGKGYSKKIQLKTHTESVHQGLEHICEQCGKGFKYTSGLYQHIKKIHEGKIVNKPLEECPICGKSFRYLKEHSKTHDKTRTVVCDLCGKTLAAETYYEQHVQRVHTNIRPLKCLVCSKGFIRKEDLRKHFMKKHERPKLPIFNEKKRFECRFCKNRFTTKGFLKIHEQNHNEDRKAYCCEFCEKTFRYKSNLNQHKCEVRSRELQDVFFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-