Lory003980.1
Basic Information
- Insect
- Latheticus oryzae
- Gene Symbol
- dnajc2
- Assembly
- GCA_030157265.1
- Location
- CM058049.1:17565914-17567761[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0003 0.2 11.7 0.0 3 31 434 466 433 471 0.85 2 2 2.3e-13 1.5e-10 40.9 0.1 2 44 552 598 551 600 0.90
Sequence Information
- Coding Sequence
- ATGGGTGAAGTAAAATTGACAAAAGATAATAATTGTACAACTATTGCAATACGTTACCACTTTGTACTAGAGACAGTAGGTGGAGAAAAGCAACTTAAATTTGTAGCACATCAAGtaagaaaactgaaagttGATCTTCCTCAAGAAGAAGCACAACAAGAGCTAACTCCTGAAAATGTAGAGTATGAAGATGACGTTGAGTATTTACGAAGTTTAGATCCCAAAGAATGGAAAAGCCAAGACCATTATAAAGTACTTGGAATTCCAAAACTTAGGTTTAAAGCAACCGAGGATATAATTAAGACAGCATATCGAAAAAAAGTCTTGAAACATCATCCTGACAAACGGAAAGCTTTAGGCGAGGAAGTAAAAGCCGATGACGATTATTTCACATGTATAACAATGGCTTATGAAACTCTTGGGAATCCAATTAAAAGAAGATCATACGATTCAGTAGATCCAGAGTTCGATAACAATATTCCTAGCGGAGcggaattaaaaaaagatttttatgaagtatttaattattattttgatttgaattccCGGTGGTCCGAAAAACAAAACGTTCCAAAGTTGGGAGGTCCTGATTCAAGTCGAGAAGAAgttgaaaagttttattcgttTTGGTATGATTTCAAATCATGGCGTGAATATTCTTATGAAGATGAAGAAGATAAAGAAAAGTGTCAAGACAGAGATGAGAGGCGATACGTCGATAAATTGAACAAAGCTGAACGTCTTcgaaagaaaaaagaagaaatgtCAAGAATACGTTCTTTAGTTGATTTAGCTTACAATAATGATCCTAGAATagctaaaataaaacaagaagaaaaagaacgAAAATTAGCAGCAAAAAGAGCGAAACAAACAGCAGCTCAAGCTagaaaagaagaagaagaaagaatACTCAGAGAAGCACAATTACTCAAAGAACAAGCTGAAGCAGCAGAACGGGCACGAATTGAAGCTAAACGTCAAGAAAGAGAAGCTCAAAAAAGAGCTttgaagaaagaaagaaagaatttgagagatttttgtaaagttaataattattttgctgAAAATAGTGAAGAGAGTGTGAATAATATGACAGGTGTTGAAACAATATGCGAAATGTTTTCTTTAAGTGAATTAgaagaaataaataagaatttgCAGAATAGTGGTAAATCGGCCTTGGAAGAAGCTTTGAAAGAAGTGAAAAGACGGATTGACAAAGAAAAACAAGATGTAATTGAAGCTgctaaacaaaaatctaatgAAAATAAAGATGTTACGATAAAAGCAATTCCAGATTGGAATCCAGAAAACATCCAACTTTTAGTAAAAGCAGTCAATTTATTTCCAGCTGGTACAAATCAAAGATGGGATGTAGTTGCTAATTTTATCAATCAACATGGCAAATTTAATACAAGTGCTAGATTTAATGCAAAGTCAGTATTAGCGAAAGCTAAAGATTTGCAAAATAcagattttacaaaaaataatttgaaagaagTAGCAAATAAACAAGCTTtcgataatttcaaaaaagaaaaacgaaACGTTTTGAATATTGATGAATCaggaatttcaaagaaaatggATGGTATTAATGTTAACGTAGATAAGCAGATTAGTAATGGGGATATGAAAGTGAAACAAGAAGTCCCATGGACAACGACAGAACAACAACTTTTAGAACAAGCTTTAAAAACTTATCCAGCATCGACAGCGGAACGATGGGATAGAATCGCCGAGTGTATTCCGAATAGAAGTAAAAAGGAGTGCATGAAGAGATACAAAGAATTGGTTGAGACTGTTAAGGCAAAAAAGGCGGCACAAGCGGCTGTTTCAAAATAA
- Protein Sequence
- MGEVKLTKDNNCTTIAIRYHFVLETVGGEKQLKFVAHQVRKLKVDLPQEEAQQELTPENVEYEDDVEYLRSLDPKEWKSQDHYKVLGIPKLRFKATEDIIKTAYRKKVLKHHPDKRKALGEEVKADDDYFTCITMAYETLGNPIKRRSYDSVDPEFDNNIPSGAELKKDFYEVFNYYFDLNSRWSEKQNVPKLGGPDSSREEVEKFYSFWYDFKSWREYSYEDEEDKEKCQDRDERRYVDKLNKAERLRKKKEEMSRIRSLVDLAYNNDPRIAKIKQEEKERKLAAKRAKQTAAQARKEEEERILREAQLLKEQAEAAERARIEAKRQEREAQKRALKKERKNLRDFCKVNNYFAENSEESVNNMTGVETICEMFSLSELEEINKNLQNSGKSALEEALKEVKRRIDKEKQDVIEAAKQKSNENKDVTIKAIPDWNPENIQLLVKAVNLFPAGTNQRWDVVANFINQHGKFNTSARFNAKSVLAKAKDLQNTDFTKNNLKEVANKQAFDNFKKEKRNVLNIDESGISKKMDGINVNVDKQISNGDMKVKQEVPWTTTEQQLLEQALKTYPASTAERWDRIAECIPNRSKKECMKRYKELVETVKAKKAAQAAVSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00167594;
- 90% Identity
- -
- 80% Identity
- -