Lory001875.1
Basic Information
- Insect
- Latheticus oryzae
- Gene Symbol
- Snapc4
- Assembly
- GCA_030157265.1
- Location
- CM058048.1:25147337-25149941[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.064 42 4.3 0.0 22 45 253 278 245 279 0.89 2 5 2.1e-07 0.00014 21.9 0.1 1 35 285 321 285 328 0.95 3 5 3.2e-09 2.1e-06 27.7 0.0 1 43 338 384 338 387 0.95 4 5 5.8e-12 3.8e-09 36.4 0.0 1 46 394 439 394 439 0.97 5 5 4.3e-10 2.9e-07 30.4 0.1 1 43 445 487 445 490 0.95
Sequence Information
- Coding Sequence
- ATGGATGATGAACAAGACGTAAAACGAATGACTGAGTTTATCAACAGTCAGAAGTCCGGCTATCAgAGCAACTTCCAGCTCGAATTTCAAGATTTCATCAACTTTAAGCATGACAGCGATCAGGAGTCTGACGATTGTGATTTTTCCGACCCCGACGAGCCCCCTGATTACAAACTCAACTTCGAAACTCTAACCGATTTAACATTTACTGAAGAAGAACAAATAGTATTAAACACTTGCCCCGACCCAACTCTAAAGAAACTAATGGTTTTGAATAGGTCCAAACACATCCAATTGatgaaaattcataaaaaattacaagatgTTATATCACAATGCGACGAAGAGATTGAAGAAAAACGCGCTTTGATGAAAACTTTCCAAACTAAACAACTCAGTCAACAGACTTTTGTATGGAAACTTGCAGCTCCGTatttcaaagataaaaaattcttcCCTTGTCCTTTGAATGATGATGCTTTGAAGAAGCGATCACAGAATGAATTGAGCGTTTATGATTTAGTCCCCTCGCCGAAATGGCTtccaattgaatttgatagattAACAAATGCTGTTAAGTGTAACTATAATATTAACAGACAAAACGATattgtttctaaaattaaaagtttaaaaaataaattacaggATGATTGTGACGATGGAATTATCGCGGAAATTGCAAAGTTAAATGAACAGTtggaaaaagtgaaaaatgatGAGGAAATCCCGCCTTTGGATTCAAATGAGTTTGTTGATTGGTACAAAGTCGCGGAAGTTTTTCTCAAAGATAAACACACGGCGCAAGAGTGCCAATCAGTTTGGAGGATGTTAATCCACCCCGAAATCAACAAATCCGAATGGTCTGAAGAAGAAAACACGAAACTAGAACAATTagctaaaaattataattatcaaaactGGGACCAAATTGCTATTGAATTGAACACAAACCGAACTGGCTTTATGACTTGTTTACAATATTTCAGCAAACTCTGCGATAAGTTCAAAAAGAGCAAATTCACACCTGAAGAAGACAAATTTCTGTTAGAAGTAATCGAAACCTACAAAATCGGGAATTTTATTCCTTGGAATAAAGTCGTTTGTCATATTAGCAACCGTTCCAGACACCAGCTCTACCACCGCTACACCTACTTCCTGTCACAAAATCACgtcaaaaaaggaaaattcTCTGAAGCCGAAGACATCCTGTTAATAATCCTCGTCAACAAGTTTGGGcgcaatttcaaaaaatgtgcAGAATACATGCCACATCGGTCCCAAGTCCAATTGAAAAGTCGCTACAATTCGAATTTACAAAGACATATCAAAAAAGGCACTTTTACAACTGAAGACGATCAGATTATTTACGAATATGCACAAAAATATGGTGAAAAAAGTTGGAGCGGATTGACTGAACGTTTGAAAAGATGCAATGCGCAAATCCGTCAAcgatataaattaattaaaacatttttacaagAAAATCCAAATTGTACAATCGCTGATATCCCGAAACGAAGACATAGATTTGATGAAATGGACGAAACACAATTCAATTTCTTAAATTACATTGCGGATCAATACAAAGACGAAAGTTTTATTCCCACGCTTTCAATGATAAAAGAAAGCCTTCAAGAATCAATGAATATTCGACAATTaagtgaaaataaatttaaaaatattgacgAAATGTTGACGGACTTTTTTCGCAATTCGGTTAGAATACGACCAGAGATGGTGATAACCGAATCGAGCTTAACCGAAGCTGCGGAAAATACTCAAGAAGTATTGAAATTGCTAAACGTTGATTTGAAAATCCCTAACGATTTAGAGTACAATGGGAATTTTGATAACAttgatttggaaattttagaaCGGATTTCGGGAAAGAAACAAAATGCAGTCAGTAGTAAAATTTGCCCACCAAATTATAGCACTTTAGTCGGGCTGAAAAATCTAATCCTCAAGCATAAAGAATATAAACAAAGTTgtacaaaagttaaaaatagaattacaATAGAGCTAAATTCTGCAGTTTTAAAACATAGGAATTGTTTTACGCAAAGATTCAATTCACTATTTTATTGGAGTGGAGTTTTATCTTTAGAAAAACCAAATATTGAAAGTAACAAACGAATGATTAATGGGAATTGTCCTGAAcctaaaaaacgaaaaattgaTGTGGCAGAGTTAGGattaagtttgaaaaaatatccaCAGATAAAGTTAGTCGATAAAAGTGTCgttgataatttaattaaaagaaatcaatcaaatgtaataaaaattgactCAGTTGTTGAGAAACCAACAGAATCTCAAGACAACGTCATCAGTGTTGAAGATTTCCAAGACGTTGAAAGACTTAacgttattttaaaaaatattaaatctgaaACTGACAACTCCGAATACAAATCATTAAAAGATGATGTTCAATTATTAAACGAAATTCTTAAATATGACAAAGTTATAAAAAGTGATCCAGAGGTAttgtaa
- Protein Sequence
- MDDEQDVKRMTEFINSQKSGYQSNFQLEFQDFINFKHDSDQESDDCDFSDPDEPPDYKLNFETLTDLTFTEEEQIVLNTCPDPTLKKLMVLNRSKHIQLMKIHKKLQDVISQCDEEIEEKRALMKTFQTKQLSQQTFVWKLAAPYFKDKKFFPCPLNDDALKKRSQNELSVYDLVPSPKWLPIEFDRLTNAVKCNYNINRQNDIVSKIKSLKNKLQDDCDDGIIAEIAKLNEQLEKVKNDEEIPPLDSNEFVDWYKVAEVFLKDKHTAQECQSVWRMLIHPEINKSEWSEEENTKLEQLAKNYNYQNWDQIAIELNTNRTGFMTCLQYFSKLCDKFKKSKFTPEEDKFLLEVIETYKIGNFIPWNKVVCHISNRSRHQLYHRYTYFLSQNHVKKGKFSEAEDILLIILVNKFGRNFKKCAEYMPHRSQVQLKSRYNSNLQRHIKKGTFTTEDDQIIYEYAQKYGEKSWSGLTERLKRCNAQIRQRYKLIKTFLQENPNCTIADIPKRRHRFDEMDETQFNFLNYIADQYKDESFIPTLSMIKESLQESMNIRQLSENKFKNIDEMLTDFFRNSVRIRPEMVITESSLTEAAENTQEVLKLLNVDLKIPNDLEYNGNFDNIDLEILERISGKKQNAVSSKICPPNYSTLVGLKNLILKHKEYKQSCTKVKNRITIELNSAVLKHRNCFTQRFNSLFYWSGVLSLEKPNIESNKRMINGNCPEPKKRKIDVAELGLSLKKYPQIKLVDKSVVDNLIKRNQSNVIKIDSVVEKPTESQDNVISVEDFQDVERLNVILKNIKSETDNSEYKSLKDDVQLLNEILKYDKVIKSDPEVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -