Lory009093.1
Basic Information
- Insect
- Latheticus oryzae
- Gene Symbol
- kn
- Assembly
- GCA_030157265.1
- Location
- CM058053.1:3772437-3775001[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-119 6.6e-116 387.9 16.7 229 562 1 319 1 326 0.84
Sequence Information
- Coding Sequence
- ATGTTCGTACATAACAATTCCAAACATGGCAGGAGAGCAAAACGACTTGATCCTACGGAAGGTCAATTTCCAGGACTTTATCCCCCTTTACCAGTCGCTACCCCTTGTATCAAAGCAATCAGTCCAAGCGAGGGATGGACATCAGGAGGTTCAACAGTCATTATTGTTGGCGATAATTTCTTCGATGGTCTTCAAGTAGTCTTCGGTACAATGCTTGTTTGGAGTGAGTTGATAACACCCCACGCCATTCGAGTTCAGACACCACCACGCCATATCCCGGGAGTTGTAGAGGTCACATTATCatataaatcaaaacaattcTGTAAAGGAGCACCAGGCCGATTCGTGTATGTTTctTTGAATGAACCGACGATAGATTACGGTTTTCAAAGACTACAAAAGCTCATACCTAGGCATCCTGGTGATCCAGAAAAATTACCCAAAGAGATAATTTTGAAACGAGCAGCAGATTTGGCGGAAGCGCTTTACACGATGCCAAGAAACAATCAGTTATCTCTATCAGCACCAAGATCGCCAACGATGGCAAATAACGGAATGACGTCCACTTTCAATACGTATACAGGACAACTGGCTGTCAGCGTTCAAGACAACGGAAACGGTCAGTGGACAGAAGAGGAGTATGGGAGAGCGCAAAGTAGCAGCGTTTCTCCCCGAGGAGGAGGCTACTGTTCCAGCGCGTCGACTCCCCATTCGTCCAACGGGGGTTCTTACGGGGGCAACATGAATGGGTACGGAGGTGCCACACCAACAAGCACCGCACAATTGTCCAATATGTTACCTAGTTCACCGTCAGCCGGAATTTTCAACTCCACACCGATTTCGACCGAAGCGAGTCATTATCATTTTGGCGCACACAACAGTAAAGCGGCGGCAGCGTCGGATAAAGAGAAAAGCGCGTTTGCCCCTGTGATACGGGGGAGTGCAACTCCCCCAACTCACCCGCCGGCACCCGCGCTTTTCCGCCATCAGCCCGTCACTGGCTGGCACCACTTGGCTGTGCAGTGTtag
- Protein Sequence
- MFVHNNSKHGRRAKRLDPTEGQFPGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYTMPRNNQLSLSAPRSPTMANNGMTSTFNTYTGQLAVSVQDNGNGQWTEEEYGRAQSSSVSPRGGGYCSSASTPHSSNGGSYGGNMNGYGGATPTSTAQLSNMLPSSPSAGIFNSTPISTEASHYHFGAHNSKAAAASDKEKSAFAPVIRGSATPPTHPPAPALFRHQPVTGWHHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01257758;
- 90% Identity
- iTF_00464450;
- 80% Identity
- iTF_00870294;